Basic Information

Insect: Operophtera brumata
Gene Symbol: -
Assembly: GCA_001266575.1
Location: JTDY01000347.1:132830-138650[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.0055 0.35 11.4 0.2 2 23 76 97 75 98 0.94

2 9 2.9 1.9e+02 2.8 0.4 2 20 326 344 325 348 0.88

3 9 8.6 5.5e+02 1.3 2.9 2 21 356 376 356 378 0.92

4 9 0.00014 0.009 16.3 2.6 1 23 384 406 384 406 0.95

5 9 0.012 0.76 10.3 0.1 2 23 414 436 414 436 0.90

6 9 8.5e-05 0.0054 17.0 4.1 1 23 442 464 442 464 0.99

7 9 0.11 6.8 7.3 6.4 1 23 470 492 470 492 0.98

8 9 0.0012 0.078 13.4 0.4 1 23 498 521 498 521 0.97

9 9 0.0031 0.2 12.1 1.7 1 23 530 552 530 552 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.0055	0.35	11.4	0.2	2	23	76	97	75	98	0.94
2	9	2.9	1.9e+02	2.8	0.4	2	20	326	344	325	348	0.88
3	9	8.6	5.5e+02	1.3	2.9	2	21	356	376	356	378	0.92
4	9	0.00014	0.009	16.3	2.6	1	23	384	406	384	406	0.95
5	9	0.012	0.76	10.3	0.1	2	23	414	436	414	436	0.90
6	9	8.5e-05	0.0054	17.0	4.1	1	23	442	464	442	464	0.99
7	9	0.11	6.8	7.3	6.4	1	23	470	492	470	492	0.98
8	9	0.0012	0.078	13.4	0.4	1	23	498	521	498	521	0.97
9	9	0.0031	0.2	12.1	1.7	1	23	530	552	530	552	0.98

Sequence Information

Coding Sequence: ATGGATTTAACTAAAATAGTGAATCAAAGTACCACCGATACAAAACCTACCATGGGAAAAGAAAAGATGATGTCGTATGAGGAGAAATCTGTAGGCTCCACAGCATTCTTCAAATGTGAGGCGTGCCCTTACATGGCCCTTGCTGAGGACGACATCAAGTTCCACCTGTTCACTGTCCACCCAGACCTTGCCAAGAGCAATGGTCTAGCAGACAACATACAGATTCCTTGTCCTGGCTGCACCAGCGTTTTTGACGCCGAAGAGACGCTCCGATCACATCTCCGTAGCCACCATAAAATGGGCATCAAAGACATCAAGAAAATGGTAAGAAGCCTGGTCCAAATAGCTCTAAAAaacgcaaaattaaaaaaagaagagaaaTTGGATGACCTTCCACAAGCTCCACCAATCAGACAGGTGGTACCCGACGTCAAAATGCCACAAGTTATTGAAATAGCACCTGACATTGTAAATGCTAACAATAATCTACCTAGAGGTGTTGCTTACATTTCTGTAGATGAGCTAAATAAGATGAGCACACCTAATTTTGAAAAGATTGACCCTAAAGAGATCATTCAGGAAGCCAGTATTAATATAGTTTACACAAATGAGGTTATAAATCGAACAAGGTACATCAGTGTGGCTGAAGCTGGGCCCTCAGTGGCACCCTGTAATATGATGCAAATGTCGAGCGTTCCACCAGATCTGATATCGTCGATCCAGCCTCATGTGGCGTCAGTAATAGACAACAGCAAGTCCTCACCCCAAGCTAAAGAGAACATTGATCTATCTCCAATGCATCACAACCCGCCTCATATATTAAAGCCAGAAGAGTTGAATAAGGAAGTAAATATTGAGAAAattgaaacaaagaaagaaatggGTATCTCATGTTTGGTGAATGGTTGCATAATATGCTTGAAGGACGAGAAGAATATCTTGTATCATAGAAAATGCCATCAGAATGGAAAGTTAGTCTGTCCGGAATGTTCAAGAATCTGTCCATCAGTGGAAGTCCTCCACACGCACCTGTGGAAGATCCATGCGATAGACTTGGAGCTGCCCACATGCCTTGAGTGTGGGTACAagacttataaaatgtacaggCTGTTCAATATTCACATGAAATGTCATGGGAAGATCAAGGCACACTTCTGTCCAATCTGTTCGAAGTCATTCAAAAACGTGAACCAGCTGTCCAAACACAAGCTGATCCACAAGAAAGATGGCACTCCAGCCGTGTGCTCGGTCTGCCAGCGCGAGTTCAGTAACGAGCGGAGGCTGAAGGTGCATGTGGCAGCAGTTCATGAGAAGCTGAAGCCGTTCAAATGCAGCCATTGCGATCATACTGTCGCTAGAAAGGAGGAGCTCAAACTACATCTACGATCACATACAGGTGACAAACCCTACTCGTGCACCGAGTGCAGCTACAGATGCGCAGACCACAACGCGATGCGACGACATAAGAAGAAACATTCCAAGGAAAGCCTATACAAGTGTAAATACTGTCCATACAGCACCATACAATCTACCGTCTTCGCCGCTCACATGATATCCAACCATCCCAATGTTAACTCCAGTGACATCCACCGATGCCCCTACTGTCCCTTCAAATCGGTCAGCAAGGATAATTATGTGTTACACCTCACAACTCACACAGATAAGGAGGGAATCCAATTACTTATAGAAATGACGAATAACAAAGCGAAGCCCAGCTGGACGATCCCCAGCGAAACAGAAAAGACTATTGAAGCTCTACCAGCTATTGAGGAGACCAAAGAAGACGCACCTAAACCTGTCAATGAGATTCCAATAGAAGTGTATGACTGTGACAGCCTTTCGGAAAGCATGCCGCAGAATTATTCTAAAAGCTACTGCGCCACACCTCCCGCCATCGACGTTCAACAAACTGAATATATCAGCCAAGCGGCAAATCTGACCAAAGACAACACTTCAACCTGTCTTATTTCCCAAAGTTCCACCAGCACATTGATGGACTGCCGCCAGTTCCCGCAGCAAATACCGCTGCAGATGACGTATGATAGCACGCAGTCAAACCTTCACGGGTTCCTAAGCACGTCGGTACCGATGGAGCAGAATCTCACTCCTAAAAGTAATGTCAGTACACTCGCGCCGAACCACTGCTCCATAGCCAGCAGTATCAGTAACAATATCATGAGCAATTTTCCTATACGACTGCCGCGATTCTCTTTACGTAACCAAATAATGCTCAAACCTGTTGATAAGATACTATCTCTCCCTATGAACAAAGTCACGGGCCCTATAATAACCCCGACACAAATCCTCCCCGTCCCGTCTTCAAGTAATTCTCCCGTCAACGTGTGTTTTGACGACGGAATGCCGAGGAAAAAGCCTAAGATATCGGTAAAAAGCAACTTAATACTCAAAGGGCCGGACCAAGAAAACATGTTTCATTCACAGCAGAAGATGGCTTTTAGAAGACTGGAGGATAATCAGAGATTTGGGTTGGGAGGTCCGGTCACGTTTAATAACTTGATCACGACTCAGTTCATGCAACTCCCTCCCGAACCTTCGTTGAGTGAATCTCCTAACAACTTGATACCGTATCCTCAAGAAACGATGCTAGGAGGAGCCGCCTCCACGCCAGTTGATAGCGAAATGACGCAGAACCCTCAAATATTCACATTCAACCAGCAGATGAATGTAAACTCCATGACAATGCTACCTCCTGCCGATAAGATACAGACAAACGACCCCAGCTACATTAAACTAGAAGCaactataaaacaaaatacccaGAGTCCAAGCTTAGAACGAATGTGCACCGAGAACTTGATGAGCACAAACATATCAAGAGAATACAAAGCGTCACCACCTCTCGAAGACATCAACAAGAACATGAGCGAAATCAAGAACGAAGTGAAATCTGATTATTACATGGCTCTGAACAACACCGAAACAAACCCATCTAACAGACTGACTATAATAGACCAGTTTCTGATAGATAACATAATGGGAGAGCAGTATTCTGGACACCTGGATCTACCAGGAGTTGTTTTACAGGATATCCCTGAACCTACTAATGAAGTTATAGAGATCGACGACAATTCTGTTGACAACAAGTTGCTGCCGCGCTACGATATGAACATTCCATTCGAATCCTTGTGTTTGATGCACAACGACTTCTTTTTCCTTGACAATGATATATCGTCAAACAACCTGGGCAATGAGTCCGTCAGTGAAATGAATAGAATGGTAGCAGAAGTGCCGCTTATAACTCAGAAGGAAAACTTGGAAGTGCCGATTGACTCGCCGTGTAATGATTTTCCAAACTTTATTCAAGGCAGGAAGGATCCCATGATGAACACATCAGTGAGATTGACTACTAATAAGATAAACGTTAAGAATATAGAATTGATGAAAAACTGA
Protein Sequence: MDLTKIVNQSTTDTKPTMGKEKMMSYEEKSVGSTAFFKCEACPYMALAEDDIKFHLFTVHPDLAKSNGLADNIQIPCPGCTSVFDAEETLRSHLRSHHKMGIKDIKKMVRSLVQIALKNAKLKKEEKLDDLPQAPPIRQVVPDVKMPQVIEIAPDIVNANNNLPRGVAYISVDELNKMSTPNFEKIDPKEIIQEASINIVYTNEVINRTRYISVAEAGPSVAPCNMMQMSSVPPDLISSIQPHVASVIDNSKSSPQAKENIDLSPMHHNPPHILKPEELNKEVNIEKIETKKEMGISCLVNGCIICLKDEKNILYHRKCHQNGKLVCPECSRICPSVEVLHTHLWKIHAIDLELPTCLECGYKTYKMYRLFNIHMKCHGKIKAHFCPICSKSFKNVNQLSKHKLIHKKDGTPAVCSVCQREFSNERRLKVHVAAVHEKLKPFKCSHCDHTVARKEELKLHLRSHTGDKPYSCTECSYRCADHNAMRRHKKKHSKESLYKCKYCPYSTIQSTVFAAHMISNHPNVNSSDIHRCPYCPFKSVSKDNYVLHLTTHTDKEGIQLLIEMTNNKAKPSWTIPSETEKTIEALPAIEETKEDAPKPVNEIPIEVYDCDSLSESMPQNYSKSYCATPPAIDVQQTEYISQAANLTKDNTSTCLISQSSTSTLMDCRQFPQQIPLQMTYDSTQSNLHGFLSTSVPMEQNLTPKSNVSTLAPNHCSIASSISNNIMSNFPIRLPRFSLRNQIMLKPVDKILSLPMNKVTGPIITPTQILPVPSSSNSPVNVCFDDGMPRKKPKISVKSNLILKGPDQENMFHSQQKMAFRRLEDNQRFGLGGPVTFNNLITTQFMQLPPEPSLSESPNNLIPYPQETMLGGAASTPVDSEMTQNPQIFTFNQQMNVNSMTMLPPADKIQTNDPSYIKLEATIKQNTQSPSLERMCTENLMSTNISREYKASPPLEDINKNMSEIKNEVKSDYYMALNNTETNPSNRLTIIDQFLIDNIMGEQYSGHLDLPGVVLQDIPEPTNEVIEIDDNSVDNKLLPRYDMNIPFESLCLMHNDFFFLDNDISSNNLGNESVSEMNRMVAEVPLITQKENLEVPIDSPCNDFPNFIQGRKDPMMNTSVRLTTNKINVKNIELMKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00811559;
90% Identity: iTF_00663634;
80% Identity: -