Basic Information

Insect: Operophtera brumata
Gene Symbol: CG11007
Assembly: GCA_001266575.1
Location: JTDY01000510.1:15747-27133[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.54 34 5.1 0.7 2 19 138 155 137 158 0.73

2 19 3.1 1.9e+02 2.7 0.7 2 23 163 184 163 184 0.93

3 19 2 1.2e+02 3.3 0.5 3 23 191 212 190 212 0.95

4 19 0.00017 0.011 16.1 0.6 1 23 217 239 217 239 0.97

5 19 0.55 35 5.1 3.5 1 20 242 261 242 263 0.92

6 19 0.0011 0.072 13.5 0.3 1 23 275 298 275 298 0.93

7 19 0.00036 0.023 15.1 1.1 1 23 304 326 304 326 0.97

8 19 0.063 4 8.0 1.3 1 23 360 383 360 383 0.98

9 19 0.0012 0.073 13.5 0.1 3 23 393 414 392 414 0.96

10 19 2.1e-05 0.0014 18.9 1.2 2 21 525 544 524 545 0.95

11 19 0.14 8.7 6.9 0.0 3 23 552 573 550 573 0.94

12 19 0.0036 0.23 11.9 0.1 1 23 578 601 578 601 0.92

13 19 4.9e-06 0.00031 21.0 0.6 2 23 607 628 606 628 0.96

14 19 0.58 37 5.0 2.4 3 20 633 650 631 652 0.93

15 19 0.0016 0.1 13.0 2.3 1 23 678 701 678 701 0.95

16 19 0.00062 0.039 14.3 0.8 1 23 707 729 707 729 0.93

17 19 0.001 0.063 13.7 0.2 1 23 735 757 735 757 0.98

18 19 0.009 0.57 10.7 0.1 1 23 763 786 763 786 0.94

19 19 6.6e-05 0.0042 17.4 1.1 1 23 792 814 792 815 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.54	34	5.1	0.7	2	19	138	155	137	158	0.73
2	19	3.1	1.9e+02	2.7	0.7	2	23	163	184	163	184	0.93
3	19	2	1.2e+02	3.3	0.5	3	23	191	212	190	212	0.95
4	19	0.00017	0.011	16.1	0.6	1	23	217	239	217	239	0.97
5	19	0.55	35	5.1	3.5	1	20	242	261	242	263	0.92
6	19	0.0011	0.072	13.5	0.3	1	23	275	298	275	298	0.93
7	19	0.00036	0.023	15.1	1.1	1	23	304	326	304	326	0.97
8	19	0.063	4	8.0	1.3	1	23	360	383	360	383	0.98
9	19	0.0012	0.073	13.5	0.1	3	23	393	414	392	414	0.96
10	19	2.1e-05	0.0014	18.9	1.2	2	21	525	544	524	545	0.95
11	19	0.14	8.7	6.9	0.0	3	23	552	573	550	573	0.94
12	19	0.0036	0.23	11.9	0.1	1	23	578	601	578	601	0.92
13	19	4.9e-06	0.00031	21.0	0.6	2	23	607	628	606	628	0.96
14	19	0.58	37	5.0	2.4	3	20	633	650	631	652	0.93
15	19	0.0016	0.1	13.0	2.3	1	23	678	701	678	701	0.95
16	19	0.00062	0.039	14.3	0.8	1	23	707	729	707	729	0.93
17	19	0.001	0.063	13.7	0.2	1	23	735	757	735	757	0.98
18	19	0.009	0.57	10.7	0.1	1	23	763	786	763	786	0.94
19	19	6.6e-05	0.0042	17.4	1.1	1	23	792	814	792	815	0.95

Sequence Information

Coding Sequence: atgatttatttagtcGGGCGAAATCGAATCTGTCTGGCATTATTTTGTTCAAACCCAGAAGAAAAGATATCCAATGAGAAGAGGATTGACGGTAGGTACACCTGGTTTCAGGTTGATGAAGATGCCACCCTCCCGCCGGGCCTCTGCTGCGCTTGCGCAGAAGACGCCGTGACAGCCGCCAAGTTCAAACATCTATGCGAGAAGTCCGCTCAACGATGGAACGAGGCAATCACATACCTCTCGAAAATTAACATCGAAAGCGAAGACAAAACCTTATTCTTTATGTGCGAGGAAAATGATATGATAGTATGTGAATCAAGAGTTGATAATGTAGAATCAGCTGTGACCACTTTAGAATGCTTAAAAAAAGCAGAGAGAAAGAAAAAGCTCAAACGAAAAGAGTTCGCTTGCGCTTGTCCGTATTGTGATAAACAGTTCCAGGCTTTAGATATTCTGAACGATCATCTGAAGCACGGGCAGAAGAGAGTATGCTGCGAATGTGGTCTGATTCTAGACAAGTCCGAGATGTCTATGCATTTACGCGATACACACGAAATAGAAACAGTTGATTGTAACGTTTGTCACGACCTGTTCAGCAGTTATGACGACGCGAATTGGCATGTAATGAAATACCACGGTCCTGACACCTTTACTTGTAAAAATTGCGGGCGCGGATACCGAAATGAGAGGGGTTTGAGAGCGCATTGGTACTCCCATTCTCTGTTCAATTGCGTAGCTTGCGGCCAAAGTTTCGAGAATAATCGCTGCTACCGACACCACAAGAGCAATTGCAAGTCTAAGCTCACATCAGAGTTCAATATTTTCGAATGCAACGATTGCGGGCTACAATACGATAAAAAACCTtccttaaaaatacatatagtCCAAAAACACTTGAACGTGCTTCCTTTTGTATGTCAGGCTTGCGGTAAACGTACTTCAACGCTAGCACATTTGAGATCGCACGAGAAAATCCACGATAAAGACAGAAAGACCTTGGAATGTCATTGTGGAGCCAAATTCCGCACTGCGTTGGGACATCGTCTTCACATGATGGTACACAGCGGTGTAAAACCGTATAAATGTACTCAATGCGAGGACTCTTTTATATCGGCGTCTAGGCGTTTAGATCACATGAAAAGGCGGCATAAGAGTACGCAGGATATGGCACACGGTTGCGACCAATGCCCCGCTCGTTTCATCAGGCCTTGGGAGCTGAAGAAGCATTATATGCTTTGGCACAGCTCGTTGGTAAAAGAGGAGAGCGCATGTCCTCGCGGCGTATGCGTCGCATGCGCAGGCGCCGCGCTCGCCGCACAGGAGTTCCGCCTGTTCGTGCAGAACGCACAGAAGATGTGGCTCAAAGCGCTCGCCAACCTCGCACGCGTACCCTCAGAGTTCACGGAAAATGCCAAATCCATCTGCGCTTTCATGTCTCAAAACGACGTCACGATGGAGATCTACAAAGACTTCGCAGGCGGCGAGCCGGGAACGGTCGTGAACAGGTCCAAATCGAAAATGAACAAAAAGTACGACAGGAAACCGAGGGTCGTTCGGAACGGTCCGATGACTTCCTGTCCGGACTGCCGCAAGTGTTTCAGCAGCCCTTATCTACTGCAGATGCATCTGCGAAACAGCGACCGCAAAGACGCCTGTCTCACATGTGGTGTAGTTCTTACTAGGGGCGCTGAATTCAAAAAGCATTTGGAGGTCGTTCATAAAGAAACTCCATTTTTATGCAAAGAATGCCCGACTGTGCTCACCACTGAGGCTGACCTTAACAAACACGAGGAAAGTGCTCACAAAGAAGGCGCTCTCACGTGCAACGCGTGCGGGCGGTCTTTCACGAGACTGTCCTCGCTCAACAACCACGTGCAGATGCATGTAGTCCTCGCCTGCAGACGTTGCGGCTCCCAGTTCACCAACAGGAGCTGCTACCGCGAACACAGGTCGTTCTGCGAGCCGAACGCCAAACCCCTCTCTAAAACCGTGCCTCGCAACCGGCGATCTAACATCCGCGACCCGGGACACTACACCTGCGACTACTGCCAGAAGAGTTACACTTGTCGGCCGCAGTTGAAGAACCACATCCTCTGGATCCACATGGACCACCGGCCGCATCAGTGCTCTTGGTGCGGCAAGAGATTCTACACAGCGGCGAGGCTGACGGAGCATTCTGTCGTCCATACACGCATCAGGAAATTCGAATGTGACAtttgcggtttaaaattagtgtCTAAAAGTGCCGTTATCTACCACAGGAGACGGCATACGGGGGAGAAGCCTTACGTGTGCGACGATTGTGGAGCTGCCTTCATCTCTTCGTCGCGTCGGTTGGAGCACGCCAAGAGGAAACACAACAAAGGGATCAGGTTCCAGTGCTCGGAGTGCCCCGGCAGCTTTGTGAGGAAAAGGGAGCTTGAGAAACACGCTGAAAAACATCATAAAGGGTCGACGGTTATTCTCACGTCCGATTTGCGGCAATTATTGAAGCCCTATTATTGGGTGAATATTCTAATGAGTATTTCCTACGTAACTTGCAAGCGCACAGGTGTAatttgcaagtatttgttcctgGAGTCGGATTGTGAATTGGACAGTCGTGAAACGGAAATCCTATTTTTCCTAATTATCGTCGTGATGCTGAGGACCAAGAAGGCGGGGAGTGTTACTATGGTCAATTACCTGTCGTCTTCCCTACTCTTCCCCGAGCCGACCTACTCCGGTCCGGAGCACGTGACGTACTTCCGCGGGCCGCAGACCCTGGACGAGGAGCTGAAgaagcacaagggcaccacttggCTGGTCTGTCTGTACGCGGCGTGGCATCCGGCCTGTGTGACCTTTGCACCTGTGTTCGCTGAGCTCTCGGCGAGCTATGCATTGGACAATTTGAATCGACAGCTGCCGACCGTGCTGATGCTCACGGACGGAGCTGAGCGCGCCCGCAGACCGCAGGCGGACTCCACTGGCAAGCTGCAGAAATTCCTGTTCTCCAAAGACAACACGAAGGCCGCGTTCGATCTGGATGACCTCTACCAGGCGTGTAAGGAGAAGCTGGCCGGCGCGACCACCGACGCCAAGAAGACCAACTAA
Protein Sequence: MIYLVGRNRICLALFCSNPEEKISNEKRIDGRYTWFQVDEDATLPPGLCCACAEDAVTAAKFKHLCEKSAQRWNEAITYLSKINIESEDKTLFFMCEENDMIVCESRVDNVESAVTTLECLKKAERKKKLKRKEFACACPYCDKQFQALDILNDHLKHGQKRVCCECGLILDKSEMSMHLRDTHEIETVDCNVCHDLFSSYDDANWHVMKYHGPDTFTCKNCGRGYRNERGLRAHWYSHSLFNCVACGQSFENNRCYRHHKSNCKSKLTSEFNIFECNDCGLQYDKKPSLKIHIVQKHLNVLPFVCQACGKRTSTLAHLRSHEKIHDKDRKTLECHCGAKFRTALGHRLHMMVHSGVKPYKCTQCEDSFISASRRLDHMKRRHKSTQDMAHGCDQCPARFIRPWELKKHYMLWHSSLVKEESACPRGVCVACAGAALAAQEFRLFVQNAQKMWLKALANLARVPSEFTENAKSICAFMSQNDVTMEIYKDFAGGEPGTVVNRSKSKMNKKYDRKPRVVRNGPMTSCPDCRKCFSSPYLLQMHLRNSDRKDACLTCGVVLTRGAEFKKHLEVVHKETPFLCKECPTVLTTEADLNKHEESAHKEGALTCNACGRSFTRLSSLNNHVQMHVVLACRRCGSQFTNRSCYREHRSFCEPNAKPLSKTVPRNRRSNIRDPGHYTCDYCQKSYTCRPQLKNHILWIHMDHRPHQCSWCGKRFYTAARLTEHSVVHTRIRKFECDICGLKLVSKSAVIYHRRRHTGEKPYVCDDCGAAFISSSRRLEHAKRKHNKGIRFQCSECPGSFVRKRELEKHAEKHHKGSTVILTSDLRQLLKPYYWVNILMSISYVTCKRTGVICKYLFLESDCELDSRETEILFFLIIVVMLRTKKAGSVTMVNYLSSSLLFPEPTYSGPEHVTYFRGPQTLDEELKKHKGTTWLVCLYAAWHPACVTFAPVFAELSASYALDNLNRQLPTVLMLTDGAERARRPQADSTGKLQKFLFSKDNTKAAFDLDDLYQACKEKLAGATTDAKKTN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -