Basic Information

Insect: Operophtera brumata
Gene Symbol: -
Assembly: GCA_001266575.1
Location: JTDY01004799.1:9440-35559[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 5.1 3.2e+02 2.0 4.8 1 23 68 91 68 91 0.95

2 25 0.064 4.1 8.0 0.2 2 23 98 120 97 120 0.95

3 25 0.0003 0.019 15.3 0.8 1 23 126 149 126 149 0.97

4 25 0.027 1.7 9.2 3.3 2 23 156 177 155 177 0.96

5 25 0.0088 0.56 10.7 5.5 1 23 183 205 183 205 0.97

6 25 0.00013 0.0085 16.4 0.1 2 23 212 234 211 234 0.94

7 25 0.00029 0.019 15.3 1.4 1 23 260 283 260 283 0.92

8 25 3.3 2.1e+02 2.6 0.1 2 23 290 312 290 312 0.92

9 25 0.00016 0.01 16.2 2.0 1 23 318 341 318 341 0.97

10 25 0.09 5.7 7.5 6.2 2 23 348 369 347 369 0.96

11 25 0.0001 0.0065 16.8 6.1 1 23 375 397 375 397 0.97

12 25 6.2e-05 0.004 17.5 0.1 2 23 404 426 403 426 0.95

13 25 0.029 1.8 9.1 1.3 1 23 454 477 454 477 0.92

14 25 0.00018 0.011 16.0 2.4 1 23 483 506 483 506 0.98

15 25 1.3e-05 0.00085 19.6 8.1 1 23 539 561 539 561 0.98

16 25 6.2e-05 0.004 17.5 0.1 2 23 568 590 567 590 0.95

17 25 0.034 2.1 8.9 3.0 1 23 646 669 646 669 0.93

18 25 0.00024 0.015 15.6 1.8 1 23 675 698 675 698 0.98

19 25 0.00061 0.039 14.3 1.9 2 23 705 726 704 726 0.97

20 25 7.8e-05 0.005 17.2 4.7 1 23 732 754 732 754 0.97

21 25 5.7 3.6e+02 1.9 2.5 1 23 790 813 790 813 0.95

22 25 0.03 1.9 9.0 2.3 2 23 819 841 819 841 0.93

23 25 2.4e-05 0.0016 18.7 1.9 1 23 847 870 847 870 0.98

24 25 0.051 3.2 8.3 5.2 2 23 877 898 876 898 0.96

25 25 0.012 0.78 10.2 6.2 1 23 904 926 904 926 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	5.1	3.2e+02	2.0	4.8	1	23	68	91	68	91	0.95
2	25	0.064	4.1	8.0	0.2	2	23	98	120	97	120	0.95
3	25	0.0003	0.019	15.3	0.8	1	23	126	149	126	149	0.97
4	25	0.027	1.7	9.2	3.3	2	23	156	177	155	177	0.96
5	25	0.0088	0.56	10.7	5.5	1	23	183	205	183	205	0.97
6	25	0.00013	0.0085	16.4	0.1	2	23	212	234	211	234	0.94
7	25	0.00029	0.019	15.3	1.4	1	23	260	283	260	283	0.92
8	25	3.3	2.1e+02	2.6	0.1	2	23	290	312	290	312	0.92
9	25	0.00016	0.01	16.2	2.0	1	23	318	341	318	341	0.97
10	25	0.09	5.7	7.5	6.2	2	23	348	369	347	369	0.96
11	25	0.0001	0.0065	16.8	6.1	1	23	375	397	375	397	0.97
12	25	6.2e-05	0.004	17.5	0.1	2	23	404	426	403	426	0.95
13	25	0.029	1.8	9.1	1.3	1	23	454	477	454	477	0.92
14	25	0.00018	0.011	16.0	2.4	1	23	483	506	483	506	0.98
15	25	1.3e-05	0.00085	19.6	8.1	1	23	539	561	539	561	0.98
16	25	6.2e-05	0.004	17.5	0.1	2	23	568	590	567	590	0.95
17	25	0.034	2.1	8.9	3.0	1	23	646	669	646	669	0.93
18	25	0.00024	0.015	15.6	1.8	1	23	675	698	675	698	0.98
19	25	0.00061	0.039	14.3	1.9	2	23	705	726	704	726	0.97
20	25	7.8e-05	0.005	17.2	4.7	1	23	732	754	732	754	0.97
21	25	5.7	3.6e+02	1.9	2.5	1	23	790	813	790	813	0.95
22	25	0.03	1.9	9.0	2.3	2	23	819	841	819	841	0.93
23	25	2.4e-05	0.0016	18.7	1.9	1	23	847	870	847	870	0.98
24	25	0.051	3.2	8.3	5.2	2	23	877	898	876	898	0.96
25	25	0.012	0.78	10.2	6.2	1	23	904	926	904	926	0.97

Sequence Information

Coding Sequence: ATGAAAGATAAAAAATCTGAAGATATCTATGACATgaataTTAAGCCGGAAGTGAAGCCAGCGGAAGTGCAGCCTAAACAGAAGAACGGCAAAAGTACAGCGACAAAGAAACGCAAAGGAAAAAAGCCTAAAGcaCTTCGAAGCACCCTGCGTAAGAAACCCGCCCCAAAGACTAAGAAGTACACGCAAGTAGGAGACTTGTACATGTGCACACAGTGCGAAAAGCTCTCCTGCAACCGTGATTACATTAGTCAGCACTTCAGATACAAGCATACGGAAGTTGGTGCACTTAAATGCGCGCTTTGTCTTAAGATACTTCCGACAAAAGCTCAGTTAACGATTCACAAATTAAAAGAACATAACATCGACGAGCGGTTCCAATGCAACGCATGCGACAAGATATACAACACAAAGCCGAGGCTTAACATGcatatgaaaatatatcacatgATGGGCGTGAAAATAAAGTGCTCCATGTGTGATTACGAGTGTTACTTCAAGTCTGTGCTGAAAAAGCATCTGTTTATGCACAAGACATCGAAGGACTTCCACTGCAAGTATTGTGAGAAGTCGTTTATGAGGAAGACGACTCTGCAGTTCCACGAGAGGATCCACACGGGGGACAAGCGCAAGGTGTGCGCGGAGTGCGGACAGGCCTTCGTGCAGAAAGCCAGCCTCAACTACCACATGGGGAAGTACCATCCCGAAGTTAGCACCCTGCGTAAGACACCCATCTCAAGGCTCCCCCCAGCTTACTACGTGCGCGTAGGAGACTCGTACAAGTGCACCCAGTGCGAAAAGCTCTTCGGTAGGCGTGATTCCTTGAGACGGCACTTCATATGGAATCACATTGAAAAAGATGCACGTAAATGCGCGCTTTGTCTTAAGATACTTCCGACAATAACTCAGTTAACCATTCACAAATTAGAAGAACATAATATCGACGAGCGGTTCCAATGCAACGCATGCGACAAGATGTACAACACGAAGCGAGCGCTTCTACATCATATAGACACATACCACATGATGGGCGAGAAAATTAAGTGCTCCATGTGTGATTTTGAGTGTTACACCAAACGCGCGTTGCATAGGCATCAGTTCAAGCACAAAACAACGAAGGACTTCCACTGCAAGTATTGTAAGAAGTCGTTTAAAAGGAAGGCGACCTTATATTCCCACGAGAAGATCCACACGGGGGACAAGCGCAAGGTGTGCGCGGAGTGCGGACAGGCCTTCGTGCAGAAAGCCAGCCTCAACTACCACATGGCGAAGTACCATCCCGAACCCTTCAAAGCTTTCCGCAGAAGAACTCCAGCACAAGGCCACCAGACTGCTACTCGCGGAAAATTGGTCGATCGATACACATGCGCGCATTGTCCTAAGAGATTTTGGTCAAAAACTCAGGTTACCATTCACAAACTAGAAGAACACAACATCGACGAGCGGTTCCGATGTAACGCGTGCGACAAGATGTACAACACGAAGCAGAGGCTTACCATGCATATGAACACATATCACATGATGGGCGAGAAAGTCAAGTGCTCCGTGTGTGATCACGAGTGTTGCAAGGAGCGGCTGAGAGAGCATCTGTTAACGCACAAACAATCCAGGGACTTCCACTGCAAGCATTGTAAGAAGTCGTTTTATAGGAGTTCTAATTTGCGAAGCCACGAGAGGATCCACACGGGGGACAAGCGCAAGGTGTGCGCGGAGTGCGGACAGGCCTTCGTGCAGAAAGCCAGCCTCAACTACCACATGGCGAAGTACCATCCCGAAGTTAGCACTCCGCTGAAGAACTCCGGCACAGGGCCGACCCCATCAGCGTACTACACGCGGGTAGGAGACTCCTACAAGTGCATCCAGTGCGAAAAGCTCTCCCACAGTGACGCTACCATAAGATGCCACTTTTTAACAATTCATAAGCAAATTGGTTTATACAGATGCGCGCTTTGTCTTAAGAGATTTAAGACAAAAACTCAGATATGCGTTCACAAATTAGAAGAACATAACATCGACGTGCGGTTCAAATGTAACGCATGCGACAAGATATTCTACATAAAGCAGAAgcttaaaatacatatgaacacATATCACATGATGGGCGAGAAAATCAAGTGCTCCATGTGTGATTACGAGTGTTACCGCAAGGAGTTGCTGAGAGACCATCTTTTAACGCATAAACGATCCAGGGATTTCCACTGCACGCAATGTAAGAAATCGTTTATGAGGCTGTCTAATTTGCGAAGCCACGAGAAGATCCACGCGGGAGTGAAAAAACATGTGTGCGCGGAGTGCGGACTGGCAAACCTGCTTAAGAACCGCGACCCAAACCCTCCCCCGGAGTACTACACGCAGGTCGGAGACTGCTACAAGTGCATCCAATGCGACAAGCTCTCCCGCAAGCGTGGTACCGCCAGACACCATTACCTGACAATCCACATGAATGGCGCACGGAAATGCGAGCATTGTTTTAAGAAATTTATTTACGATAATCAGTTAACGATTCACAAACTAGAAGAACATAACATCGACGAGCGGTTCCAATGCAACGCATGCGACAAGATATACAACACGAAGCGGACATTGAAATTACATATGAACACATATCACATGATGGGCGAGAAAATTAAGTGCTCCGTGTGTGAATACGAGTGTTTCAACAAGCATGCACTGAGAAAGCATCTGTTCAAGCACAAGGTATCGAAGGACTTCCACTGCACGTATTGCAAGAAGTCGTTTATGAGGAAGACGACTCTGCAGTTCCACGAGAGGATCCACACGGGGGACAAACGCAAGGTGTGCGCGGAGTGCGGACAGGCCTTC
Protein Sequence: MKDKKSEDIYDMNIKPEVKPAEVQPKQKNGKSTATKKRKGKKPKALRSTLRKKPAPKTKKYTQVGDLYMCTQCEKLSCNRDYISQHFRYKHTEVGALKCALCLKILPTKAQLTIHKLKEHNIDERFQCNACDKIYNTKPRLNMHMKIYHMMGVKIKCSMCDYECYFKSVLKKHLFMHKTSKDFHCKYCEKSFMRKTTLQFHERIHTGDKRKVCAECGQAFVQKASLNYHMGKYHPEVSTLRKTPISRLPPAYYVRVGDSYKCTQCEKLFGRRDSLRRHFIWNHIEKDARKCALCLKILPTITQLTIHKLEEHNIDERFQCNACDKMYNTKRALLHHIDTYHMMGEKIKCSMCDFECYTKRALHRHQFKHKTTKDFHCKYCKKSFKRKATLYSHEKIHTGDKRKVCAECGQAFVQKASLNYHMAKYHPEPFKAFRRRTPAQGHQTATRGKLVDRYTCAHCPKRFWSKTQVTIHKLEEHNIDERFRCNACDKMYNTKQRLTMHMNTYHMMGEKVKCSVCDHECCKERLREHLLTHKQSRDFHCKHCKKSFYRSSNLRSHERIHTGDKRKVCAECGQAFVQKASLNYHMAKYHPEVSTPLKNSGTGPTPSAYYTRVGDSYKCIQCEKLSHSDATIRCHFLTIHKQIGLYRCALCLKRFKTKTQICVHKLEEHNIDVRFKCNACDKIFYIKQKLKIHMNTYHMMGEKIKCSMCDYECYRKELLRDHLLTHKRSRDFHCTQCKKSFMRLSNLRSHEKIHAGVKKHVCAECGLANLLKNRDPNPPPEYYTQVGDCYKCIQCDKLSRKRGTARHHYLTIHMNGARKCEHCFKKFIYDNQLTIHKLEEHNIDERFQCNACDKIYNTKRTLKLHMNTYHMMGEKIKCSVCEYECFNKHALRKHLFKHKVSKDFHCTYCKKSFMRKTTLQFHERIHTGDKRKVCAECGQAF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -