Basic Information

Insect: Operophtera brumata
Gene Symbol: -
Assembly: GCA_001266575.1
Location: JTDY01000693.1:96251-106187[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 32 0.72 46 4.7 0.0 3 23 2 23 1 23 0.91

2 32 1.6 1e+02 3.6 0.7 2 23 55 77 54 77 0.94

3 32 0.0021 0.13 12.7 0.7 2 23 104 125 103 125 0.96

4 32 0.13 8.1 7.1 1.5 1 23 129 152 129 152 0.93

5 32 0.0047 0.3 11.6 0.5 3 22 158 177 157 177 0.96

6 32 0.22 14 6.3 4.7 1 23 184 207 180 207 0.87

7 32 9.1e-05 0.0058 16.9 0.7 1 23 214 237 214 237 0.97

8 32 0.0015 0.095 13.1 3.3 1 23 242 264 242 264 0.97

9 32 1.4e-07 9.2e-06 25.8 3.8 1 23 269 291 269 291 0.99

10 32 2.5 1.6e+02 3.0 0.1 2 23 373 395 372 395 0.93

11 32 0.69 44 4.7 0.9 3 23 423 443 421 443 0.93

12 32 1.1 68 4.1 0.4 1 17 447 463 447 470 0.73

13 32 0.034 2.2 8.9 0.4 1 22 474 495 474 495 0.95

14 32 0.0013 0.082 13.3 2.7 1 23 532 555 532 555 0.97

15 32 0.0002 0.013 15.8 0.8 1 23 560 582 560 582 0.96

16 32 3.2e-05 0.002 18.4 0.9 1 23 588 610 588 610 0.93

17 32 0.043 2.7 8.5 0.7 1 14 616 629 616 631 0.91

18 32 0.067 4.2 7.9 0.1 2 23 692 714 691 714 0.93

19 32 0.012 0.78 10.2 0.5 2 23 741 762 740 762 0.96

20 32 0.014 0.9 10.1 0.3 1 23 766 789 766 789 0.96

21 32 0.0011 0.068 13.6 1.3 1 21 793 813 793 814 0.96

22 32 0.017 1.1 9.8 0.8 3 23 836 857 835 857 0.95

23 32 0.18 12 6.6 0.0 2 23 882 904 881 904 0.93

24 32 0.14 8.9 6.9 1.3 3 23 929 949 928 949 0.97

25 32 0.012 0.75 10.3 3.2 2 21 954 973 953 974 0.93

26 32 7 4.5e+02 1.6 0.2 1 23 1015 1038 1015 1038 0.87

27 32 0.31 20 5.8 0.2 2 23 1064 1086 1063 1086 0.95

28 32 0.018 1.1 9.7 1.0 2 23 1110 1131 1109 1131 0.94

29 32 0.00096 0.061 13.7 0.0 1 23 1135 1158 1135 1158 0.97

30 32 0.31 20 5.8 0.5 1 23 1162 1185 1162 1185 0.97

31 32 0.00018 0.011 16.0 2.8 1 23 1224 1247 1224 1247 0.97

32 32 0.00039 0.025 15.0 0.9 1 23 1257 1280 1257 1280 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	32	0.72	46	4.7	0.0	3	23	2	23	1	23	0.91
2	32	1.6	1e+02	3.6	0.7	2	23	55	77	54	77	0.94
3	32	0.0021	0.13	12.7	0.7	2	23	104	125	103	125	0.96
4	32	0.13	8.1	7.1	1.5	1	23	129	152	129	152	0.93
5	32	0.0047	0.3	11.6	0.5	3	22	158	177	157	177	0.96
6	32	0.22	14	6.3	4.7	1	23	184	207	180	207	0.87
7	32	9.1e-05	0.0058	16.9	0.7	1	23	214	237	214	237	0.97
8	32	0.0015	0.095	13.1	3.3	1	23	242	264	242	264	0.97
9	32	1.4e-07	9.2e-06	25.8	3.8	1	23	269	291	269	291	0.99
10	32	2.5	1.6e+02	3.0	0.1	2	23	373	395	372	395	0.93
11	32	0.69	44	4.7	0.9	3	23	423	443	421	443	0.93
12	32	1.1	68	4.1	0.4	1	17	447	463	447	470	0.73
13	32	0.034	2.2	8.9	0.4	1	22	474	495	474	495	0.95
14	32	0.0013	0.082	13.3	2.7	1	23	532	555	532	555	0.97
15	32	0.0002	0.013	15.8	0.8	1	23	560	582	560	582	0.96
16	32	3.2e-05	0.002	18.4	0.9	1	23	588	610	588	610	0.93
17	32	0.043	2.7	8.5	0.7	1	14	616	629	616	631	0.91
18	32	0.067	4.2	7.9	0.1	2	23	692	714	691	714	0.93
19	32	0.012	0.78	10.2	0.5	2	23	741	762	740	762	0.96
20	32	0.014	0.9	10.1	0.3	1	23	766	789	766	789	0.96
21	32	0.0011	0.068	13.6	1.3	1	21	793	813	793	814	0.96
22	32	0.017	1.1	9.8	0.8	3	23	836	857	835	857	0.95
23	32	0.18	12	6.6	0.0	2	23	882	904	881	904	0.93
24	32	0.14	8.9	6.9	1.3	3	23	929	949	928	949	0.97
25	32	0.012	0.75	10.3	3.2	2	21	954	973	953	974	0.93
26	32	7	4.5e+02	1.6	0.2	1	23	1015	1038	1015	1038	0.87
27	32	0.31	20	5.8	0.2	2	23	1064	1086	1063	1086	0.95
28	32	0.018	1.1	9.7	1.0	2	23	1110	1131	1109	1131	0.94
29	32	0.00096	0.061	13.7	0.0	1	23	1135	1158	1135	1158	0.97
30	32	0.31	20	5.8	0.5	1	23	1162	1185	1162	1185	0.97
31	32	0.00018	0.011	16.0	2.8	1	23	1224	1247	1224	1247	0.97
32	32	0.00039	0.025	15.0	0.9	1	23	1257	1280	1257	1280	0.97

Sequence Information

Coding Sequence: ATGTGCGTTTACTGCTATGCCGTTATCGAAAACCCGGACGACTACAGACGCCATATAGATGAAACACACGAGACTGTTGATATGTGCATCGCTTTCGCGCACGTTAAAAATAGGAACAGAATAAACGTTAAAGACTATCTGAAAGTCGATTGCGTTAACTTGAAATGCAGATTGTGTAAGGAACCTTGCGAAACGTTAGCTCTAGTAGCCCAGCATCTAAAGGAACGCCATGAAAACGACGATATCAAAGATATGGACTTGAACTATGAAGTGGGTTTGCACCCCTTCCGATTGATTAAAGATAAATGGAACTGCACGATTTGCAACATGAAACTGCCGACCTTGACCAAGCTCACAAGACACATGTCCTCACATTTCGCGGAGCATGTATGCGGGTTGTGCGACAAAAGCTACTTGAGTGCTCAAAGCTTGAAATACCACGTAAAGTTTAACCACACGAAGGTTTCCGCCTGTAGAAAGTGTTCCAAAGAGTTTTCAAATCCCGAAGAGAGGAAAGAGCACATGAAAACGTCAACGAAGTGCTGGGGATTCGCTTGCATTCATTGCAAGGAACGCTTCTCGTCTTGGGAGCACAAGCAGAGACATTTAGTGAGCAAACACAACGTTGAAGCCTTGACGTATCCATGTCCGGATTGCCAGATCGTGTTCGACTCCAGATCTAACTTCTATTACCATTATAGTACGACGCACTCGGAGTTGCCTCACATGTGCTCAGATTGCGGTAGGCGGTTCGGAAAAGTATGTCAGCTTCGTGATCATATGGGCACGCATGCAGAGAAACAGTTCAAGTGTTCTGTTTGTTCAAAGGCGTTCTTTCGAAAGAGGAACTTGCAACGGCACATGCGGACGCACCTGGAAAGGACTCGTGATATGGCCAAGCGGAATGCTGAAGTTGTGTTACAGTATTCCACACTGTATCCGTTCAGATTGCGAGGCAAAACCTTGATGTGCGTTTACTGCTGCGACGAAATTGAAGACCCACACGAGTACAGATGTCATATGGATGACATGCACAAGACTGTCGATGTATACACAGCTTTTGCGCACACCAAGTGTAGAGATAGAGACTACTTGAAGGTCGATTGCATTGATTTGAAATGCAGATTGTGTATGAAACCTTTTGATACAGTCGCTGAAGTAGCTCAACATCTCAAAGACCAACATGAGGATAAATATATCAATGACATGGACTTAAACTATGAAGTGGGTTTGCATCCGTACCGATTAATAAAAGACAAATTGTTCTGTCTCGTATGCAACATGAAGCAGCCGACGTTGACTAAGCTTACAAGACACATGTCCTCGCATTTCGCTGACTACGCTTGCGATGTTTGCGACAAAAGCTATTTGAATGTAGAAAGTCTAAGGTTCCACGTTAAGTTTAGCCACTCCGAAAAATACATCTGCAGAAAATGCACAATGGAGTTTTCTACGGCAGAAGAAAGAAAAGAACACCTGAAGACATCTGCGAAGTGTTGGGGGTTCGCTTGCATTTATTGCAAAGAAAGATTCTCCTCGTGGGAGCGTAAACAGTGTCATTTAGTCAGTAAACACAACGTACAAGCATCGACATACCCATGTTCGGACTGTGGCATAGTGTTTAAATCGAGGGTACGCTTCTATCATCATTATAATAAGACGCACTCAGATCTTGCACACATGTGCTCTTATTGCGGAAAGAAGTTTGGAAATAAGGGTCTGCTTGATGATCATACAATCATACACACCCGAGAGAAGCAGTTTCGGTGCACTGTTTGTTCGAAGGCATTCTCTAGAAATAAGGGCTTACGAGATCACATGTGGACGCACAACGATAAAAAGAGATTCCCTTGCATGATTTGCGATAGGACTTTTAGTCAGAAATATTCCACACTGTATCCGTTCAGGTTGCGAGGAAAAATCTTGATCTGCGTTTACTGCTGCGACGAATTCGAAGATCCGGATACGTACCGATGCCATATGGATGAGACGCACAAGAATCCAATTCTTTATACTGCGTTCGCTCACACTGGCAGGAACAGAGATTACCTCAAGGTAGACTGCGTCAACCTCAAATGCAGGATATGTGACGCGCCTTTTAACACGGTCAACGAAATAGCTAAACATCTTAAAGATACCCACGTGAATGGTGATATCGAACACATGAACTTGAATTTTGAAGTTGGCTTGCATCCATACCGTTTGATTAAAGATAAGTGGGTTTGTCTCATGTGTAATATGAAACTGCCGTCATTGACTAAGCTACGCAGGCACATGTCCTCTCACTATGCAGAATACGTTTGCGATATTTGCGGCAGGAGCTACTTAAAAGTTGACATGCTGCAATACCACGTTAAGTCTACGCATTCAGGAAAATATCCATGCAGAAAATGCTGGAAGGTTTTTACgacaaaagaagaaaagaaacaGCATAGGCGTAATGCCGAACTGATTCTCAGACACTCGACTGCTTATCCATTCAAAACTCGTTTCAGTCAGATTCTATGCGCTTTTTGCCACGAGGAGTATAACACACTGTCGGAATTACGGTATCACATGTCACTCGATCACGTAAACTCTGATTATAGCAATGTCTTCTATAGAATAAACGATAACTTAATTAAAGTAGATATAACAGACTTAAAGTGTAAGATATGCTCACTGGTAATTCCTGATGTTGATTCGTTAATGACTCATTTGTCTCAAGCACATCAAAAATTTGTAAACTTTAATTCCCGTTTTGGAGTACTTCCTTACAAACAGAATACAGAGAACCAGTGGCTATGTGTCTACTGCCAGAGGCATTACGCGGAGTTCGTTTCGTTTAAACGTCATATAGGAACTCATTTCATGCATTGCTCTTGTGACAAATGCGGTACTACCTTTGTGTCTGACCATGCGTTACGCGACCATCATCGGCAAGTAAAATGCTTCCGAACGGCTTACCATCCACGAAACGGAAAAATCATGAGATCTCGTGGTAATGCTGAAATTATCCTCCAATGTTCCACTGTTTGTCCCTTTAGGACGTGGAAGAACAATTTCAATTGCGTGTTTTGCCGCGATCAAACTAACGATCCGAGCAGCTTGAGGATGCACGTGGCTGCTCGTCACGCTAATTACGACGTCCAAGCCGCATTCTACAAAAAACTCGGGAAAGACTTCCTTAGCGTAGATATAACTGATCTTCAATGTAAACTCTGCTTCGTGCCTTTAACCACAATCGACGCTCTGACATACCACTTGAAAAATGATCACCAACAACCTATAAACTTAGACGCTCAATTAGGTTTGCTCCCCTTCAGATTGAGCGATGGTTCTGTATGGAAATGCACAATCTGCACGAACCAATTCAAAGACTTTATAtcgttaaaaaaacatacagcaGACCACTTTCAAAACTATGTATGCGATGCTTGTGGCGAAGGGTTTATTACGGAGTCAGCGATGATCGCGCACATCAAGATACCTCAtgaaaacaaatatagctgCAGTCGATGCATCGCAACATTTTCCTCACTGGATGAAAGAAATGTCCACGTTAAGACTCAGCACACTTCGATGCCGTATATGTGTATCTACTGCACGGAGAAACCACGTTTCGCCAATTGGGAATTGCGCAAGAAGCATCTTATGGAAGTTCACAACTATAAAACTGGAGCTGATAAATACGAATGCACCACCTGTCAAAAGAGCTTCAAGACAAGGTCGGGCAAGTTCAACCATATGGCGAGAACACACAAGTTTAAAAAGGATGCAGAACTAAACTATCCTTGTACTAGTTGTCCGAAAGCTTTCACAACTAAACTGTTTTTAGACAAGCACATGGCTAAGAAGCATTTTGATATCTGA
Protein Sequence: MCVYCYAVIENPDDYRRHIDETHETVDMCIAFAHVKNRNRINVKDYLKVDCVNLKCRLCKEPCETLALVAQHLKERHENDDIKDMDLNYEVGLHPFRLIKDKWNCTICNMKLPTLTKLTRHMSSHFAEHVCGLCDKSYLSAQSLKYHVKFNHTKVSACRKCSKEFSNPEERKEHMKTSTKCWGFACIHCKERFSSWEHKQRHLVSKHNVEALTYPCPDCQIVFDSRSNFYYHYSTTHSELPHMCSDCGRRFGKVCQLRDHMGTHAEKQFKCSVCSKAFFRKRNLQRHMRTHLERTRDMAKRNAEVVLQYSTLYPFRLRGKTLMCVYCCDEIEDPHEYRCHMDDMHKTVDVYTAFAHTKCRDRDYLKVDCIDLKCRLCMKPFDTVAEVAQHLKDQHEDKYINDMDLNYEVGLHPYRLIKDKLFCLVCNMKQPTLTKLTRHMSSHFADYACDVCDKSYLNVESLRFHVKFSHSEKYICRKCTMEFSTAEERKEHLKTSAKCWGFACIYCKERFSSWERKQCHLVSKHNVQASTYPCSDCGIVFKSRVRFYHHYNKTHSDLAHMCSYCGKKFGNKGLLDDHTIIHTREKQFRCTVCSKAFSRNKGLRDHMWTHNDKKRFPCMICDRTFSQKYSTLYPFRLRGKILICVYCCDEFEDPDTYRCHMDETHKNPILYTAFAHTGRNRDYLKVDCVNLKCRICDAPFNTVNEIAKHLKDTHVNGDIEHMNLNFEVGLHPYRLIKDKWVCLMCNMKLPSLTKLRRHMSSHYAEYVCDICGRSYLKVDMLQYHVKSTHSGKYPCRKCWKVFTTKEEKKQHRRNAELILRHSTAYPFKTRFSQILCAFCHEEYNTLSELRYHMSLDHVNSDYSNVFYRINDNLIKVDITDLKCKICSLVIPDVDSLMTHLSQAHQKFVNFNSRFGVLPYKQNTENQWLCVYCQRHYAEFVSFKRHIGTHFMHCSCDKCGTTFVSDHALRDHHRQVKCFRTAYHPRNGKIMRSRGNAEIILQCSTVCPFRTWKNNFNCVFCRDQTNDPSSLRMHVAARHANYDVQAAFYKKLGKDFLSVDITDLQCKLCFVPLTTIDALTYHLKNDHQQPINLDAQLGLLPFRLSDGSVWKCTICTNQFKDFISLKKHTADHFQNYVCDACGEGFITESAMIAHIKIPHENKYSCSRCIATFSSLDERNVHVKTQHTSMPYMCIYCTEKPRFANWELRKKHLMEVHNYKTGADKYECTTCQKSFKTRSGKFNHMARTHKFKKDAELNYPCTSCPKAFTTKLFLDKHMAKKHFDI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -