Basic Information

Insect: Operophtera brumata
Gene Symbol: -
Assembly: GCA_001266575.1
Location: JTDY01006056.1:1891-13335[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.16 10 6.7 0.8 1 23 93 116 93 116 0.94

2 21 0.00094 0.059 13.8 0.8 1 23 151 174 151 174 0.96

3 21 0.00069 0.043 14.2 1.5 1 23 180 202 180 202 0.95

4 21 8e-07 5.1e-05 23.4 1.0 1 23 208 230 208 230 0.99

5 21 2.5e-06 0.00016 21.9 0.4 1 21 236 256 236 257 0.97

6 21 1.2 74 4.0 3.4 3 23 318 339 317 339 0.89

7 21 0.1 6.5 7.3 0.1 2 23 368 390 367 390 0.91

8 21 0.0012 0.075 13.4 1.7 1 23 412 434 412 434 0.99

9 21 0.00017 0.011 16.1 0.1 1 23 438 460 438 460 0.98

10 21 0.00039 0.024 15.0 2.6 1 23 465 488 465 488 0.96

11 21 2.7 1.7e+02 2.9 0.1 2 23 495 517 495 517 0.85

12 21 2.5e-05 0.0016 18.7 0.1 1 23 524 547 524 547 0.98

13 21 3.1e-05 0.002 18.4 0.8 1 23 553 575 553 575 0.96

14 21 2.8e-05 0.0018 18.5 2.5 1 23 581 603 581 603 0.99

15 21 3.2e-05 0.002 18.4 1.5 1 19 609 627 609 629 0.94

16 21 0.0013 0.082 13.3 1.2 1 23 696 718 696 718 0.97

17 21 0.17 11 6.7 0.2 2 23 735 757 735 757 0.90

18 21 0.0069 0.44 11.0 0.4 1 23 764 787 764 787 0.98

19 21 0.00019 0.012 15.9 0.1 1 23 793 815 793 815 0.98

20 21 1.9e-06 0.00012 22.2 1.9 1 23 821 843 821 843 0.99

21 21 0.098 6.2 7.4 1.8 7 23 854 871 848 871 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.16	10	6.7	0.8	1	23	93	116	93	116	0.94
2	21	0.00094	0.059	13.8	0.8	1	23	151	174	151	174	0.96
3	21	0.00069	0.043	14.2	1.5	1	23	180	202	180	202	0.95
4	21	8e-07	5.1e-05	23.4	1.0	1	23	208	230	208	230	0.99
5	21	2.5e-06	0.00016	21.9	0.4	1	21	236	256	236	257	0.97
6	21	1.2	74	4.0	3.4	3	23	318	339	317	339	0.89
7	21	0.1	6.5	7.3	0.1	2	23	368	390	367	390	0.91
8	21	0.0012	0.075	13.4	1.7	1	23	412	434	412	434	0.99
9	21	0.00017	0.011	16.1	0.1	1	23	438	460	438	460	0.98
10	21	0.00039	0.024	15.0	2.6	1	23	465	488	465	488	0.96
11	21	2.7	1.7e+02	2.9	0.1	2	23	495	517	495	517	0.85
12	21	2.5e-05	0.0016	18.7	0.1	1	23	524	547	524	547	0.98
13	21	3.1e-05	0.002	18.4	0.8	1	23	553	575	553	575	0.96
14	21	2.8e-05	0.0018	18.5	2.5	1	23	581	603	581	603	0.99
15	21	3.2e-05	0.002	18.4	1.5	1	19	609	627	609	629	0.94
16	21	0.0013	0.082	13.3	1.2	1	23	696	718	696	718	0.97
17	21	0.17	11	6.7	0.2	2	23	735	757	735	757	0.90
18	21	0.0069	0.44	11.0	0.4	1	23	764	787	764	787	0.98
19	21	0.00019	0.012	15.9	0.1	1	23	793	815	793	815	0.98
20	21	1.9e-06	0.00012	22.2	1.9	1	23	821	843	821	843	0.99
21	21	0.098	6.2	7.4	1.8	7	23	854	871	848	871	0.85

Sequence Information

Coding Sequence: ATGCCAGGAACGCTCCCTGTTGTCGGCGGCGTAGAATCCAAGAGCGAGTCCAAATTATTTTCCTTTTGCGAGATGCCTTATCTCTTTCCCGTCTTAGCTCCTCTATTAGCAAgaATCAAAACAGAAGAGTTTTTGGTAAAACTCGAAGTGGAATCTGACTTCGAAAATAACTCCAGGCTCAAAGAAGGCGCCGAGCGGCGTGCTGCGTTCCGGAATAACATTTCTACTATTCTGGAAATCAGCACTGCTTACCCTTTCAAATACAGGAAAGGAGCGTATCTCTGTTTCTTCTGCAAATCAACTTTCATAGAACCCGAGAAACTTCGGGAGCATAACAGAATACAACACGCAGAAACAAAACATCTCTTAAAGCCACGCAAATATGAACCGTTGAAGATCGATTTCGCGGAAACCNATTTAAATACAGTGCACGGGGAGAAAACCGCCATCTTTCCTTGTCCTGTGTGTCCGAGGGTTTTCGATTTGTGCAGCCAACGAACGGCTCACATAAGATTCCGTCATCTGCAGGAGCGGAACCATATCTGTTCAGTTTGTGGAATGAAATTCTTCACTAACTACGAGCTTCAGGAGCATTCCATCAAGCATGGCGGGGAAAGGATATACCAGTGTGATGTTTGTAAAAAGTCCTACGCCAGGTTAAAGACTTTGAGAGAACATATGAGAATACATAATAATGATCGAAGATTCGTGTGTCCCGTGTGTGGCCAGTCGTTTATACAGAACTGCAGCTTGAAGCAGCATATGAGGGGCTTTGTTACAGgtAAACATCAGCAGAAGTCTCCACAAGACATGATCGATAAGAAAAATTATACGCAAAAGATTCAAGCTAGAAAACAACCAGAATACAAACTCACTGCCgacaaggaatgtgttattaagcTCTTACTTAGTTCGAGGATATGCCCTTTTAAATGGAAAAACAGTATATTTTGTTGCATATACTGCAATGAACAGTGTTCAGACCCGGTCAAATTAAGATACCATAATCAAGTGCATGGAAACCTTAAACTGGCAGAGATAAGAAGAGCGCTCACTAATTTAAAAGCAAATGATTTAGTAAAAGCAGATATAACTGATGTAAGCTGTAAACTTTGCGACGCTACGATAGTTAGATTTGATGATTTGAAAATTCATTTAGTTAATAAACACAAGCTCAATTCTAACCTTATATCAGATGATAGAATTCTTCCTTTCAAACTGGATACAGGATCCTTCAAATGCGGGACCTGTGATGAGGGCTTTCCGGAATACATGACTCTTTTTCATCATTTAAAAACTCATTTCAAGAATTACACTTGCGAGCAATGTGGAACTGGGTACGTCTCTCGAATCGCATTGCAGAGACACGTTGCCTCGCACCAAACGGGATCCTTTCCTTGCAATGAATGTGATAAAGTATTTCGCACACAGCAATATAAGCATAACCATGAGAAAATGGTTCATTTGAAGGTTAAAAGAAACAGATGTCCTTATTGCCTTGAGACTTTTTTGTACTACGTTCAAAAGTTGAATCATATAGCCACCGCCCACGGGATCATCGTTAAACAATTTAGATGTGATATGTGTCCAAGCGTATTCAATGTCAAAGGAGAGCTGAACAGCCATATTCGCACCATCCATTTAAAAGAGAAACGCCATGCTTGTGATGTTTGTGATGCGAAGTTCAGTTCTAAATCCGGTGTAAGAAAACACATGCTAATGCATACTGGTGTGAAAAAGTACAAGTGTGGGGTTTGTCAAAAAGCGTATGGACGACATTTCACATTACGACAGCATATGAGAATCCATTTAGATGATAGGCGATTCGCTTGCAATATATGTGGGAAATCCTTTGTGCAGAAATGTAGTTTGAAGAACCATGGTAAACCTCAGCAGAAGTCTCAAGAAGACATGATCGATAAGAAAAATCATACGCAAAACATTCAAGCTAGAAAACAACCAGGAAACAAACACCTCAAGGAACGCGTTATGAAGCTTTTACTTAGTTCCAGAATATGCCCATTTAAATggaataacaatatattttattgcataTACTGCAATGAAAAGTATTCAGACCCGAATTATACTTGCGAGCAATGTGGAACTGGGTTCGTTTCTGATTGCGCGTTGCGGAGACACTTTGGCACGCACGAAACTGGATCCTTTTCTTGCAATGAATATGAAAAAGCTAAGACAAATAGATGTCCTTACTGCTTTGAAAGTTTTATGAGCTATCCTCAAAAGTTGAATCATATTTCCGCCGTACACGGGATCAAGATTAAACAATTTACGTGTGATTTGTGCCCTAGCGTATTCAATATCAGGGGAAGGCTTTACAGCCATATTCGTACAACTCATTTGAAAGAAAAACGCTATGCTTGTGATGATTGTGACGCGAACTTCAGTGCTAAATCCGGTGTAAGTAAACACATGCTAACGCATACTGGTGTGAAAAAGTACAAGTGTCAGTTTTGTCAAAAGGCGTATGGACAACAGTCCACATTACGACAGCATATGAGAATCCATTTAGATAGGCGATTCGTGTGCAATGTATGGGAGAAATCCTTTGTGCAGAAATGTAGTCTGAAGCACCATGGTAGAACACGCCACCCGGATCACCCGAATCCAGCTGGACAATACGACTAG
Protein Sequence: MPGTLPVVGGVESKSESKLFSFCEMPYLFPVLAPLLARIKTEEFLVKLEVESDFENNSRLKEGAERRAAFRNNISTILEISTAYPFKYRKGAYLCFFCKSTFIEPEKLREHNRIQHAETKHLLKPRKYEPLKIDFAETXLNTVHGEKTAIFPCPVCPRVFDLCSQRTAHIRFRHLQERNHICSVCGMKFFTNYELQEHSIKHGGERIYQCDVCKKSYARLKTLREHMRIHNNDRRFVCPVCGQSFIQNCSLKQHMRGFVTGKHQQKSPQDMIDKKNYTQKIQARKQPEYKLTADKECVIKLLLSSRICPFKWKNSIFCCIYCNEQCSDPVKLRYHNQVHGNLKLAEIRRALTNLKANDLVKADITDVSCKLCDATIVRFDDLKIHLVNKHKLNSNLISDDRILPFKLDTGSFKCGTCDEGFPEYMTLFHHLKTHFKNYTCEQCGTGYVSRIALQRHVASHQTGSFPCNECDKVFRTQQYKHNHEKMVHLKVKRNRCPYCLETFLYYVQKLNHIATAHGIIVKQFRCDMCPSVFNVKGELNSHIRTIHLKEKRHACDVCDAKFSSKSGVRKHMLMHTGVKKYKCGVCQKAYGRHFTLRQHMRIHLDDRRFACNICGKSFVQKCSLKNHGKPQQKSQEDMIDKKNHTQNIQARKQPGNKHLKERVMKLLLSSRICPFKWNNNIFYCIYCNEKYSDPNYTCEQCGTGFVSDCALRRHFGTHETGSFSCNEYEKAKTNRCPYCFESFMSYPQKLNHISAVHGIKIKQFTCDLCPSVFNIRGRLYSHIRTTHLKEKRYACDDCDANFSAKSGVSKHMLTHTGVKKYKCQFCQKAYGQQSTLRQHMRIHLDRRFVCNVWEKSFVQKCSLKHHGRTRHPDHPNPAGQYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -