Basic Information

Insect: Operophtera brumata
Gene Symbol: -
Assembly: GCA_001266575.1
Location: JTDY01005941.1:19452-27051[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 34 0.0021 0.14 12.6 0.1 2 23 13 35 12 35 0.91

2 34 0.00042 0.027 14.8 3.3 1 23 39 62 39 62 0.96

3 34 0.001 0.066 13.6 0.3 1 23 67 90 67 90 0.98

4 34 0.065 4.1 8.0 0.4 1 23 140 162 140 162 0.95

5 34 0.52 33 5.1 0.1 3 23 190 211 188 211 0.91

6 34 0.0015 0.097 13.1 0.8 2 23 232 254 231 254 0.91

7 34 0.026 1.6 9.2 7.5 1 23 259 281 259 282 0.96

8 34 0.0003 0.019 15.3 0.6 3 23 288 309 286 309 0.96

9 34 0.53 34 5.1 2.4 2 23 312 334 311 334 0.93

10 34 3.2 2e+02 2.7 1.7 3 19 342 358 341 361 0.87

11 34 0.0004 0.025 14.9 4.6 1 23 411 434 411 434 0.97

12 34 0.92 58 4.4 0.4 2 23 463 485 462 485 0.94

13 34 0.08 5.1 7.7 0.1 3 23 508 529 506 529 0.94

14 34 0.0015 0.098 13.1 1.1 1 23 534 557 534 557 0.94

15 34 2.5e-05 0.0016 18.7 0.4 1 23 562 585 562 585 0.94

16 34 0.014 0.86 10.1 0.9 3 23 592 613 590 613 0.95

17 34 0.00017 0.011 16.1 4.5 1 23 617 640 617 640 0.97

18 34 0.014 0.89 10.1 0.9 3 23 648 668 647 668 0.98

19 34 0.00036 0.023 15.1 2.4 1 23 674 696 674 696 0.96

20 34 2.7 1.7e+02 2.9 1.9 1 23 738 760 738 760 0.97

21 34 0.89 56 4.4 0.1 3 23 789 810 788 810 0.84

22 34 0.43 27 5.4 3.1 2 23 831 852 830 853 0.94

23 34 0.0002 0.013 15.9 7.2 1 23 858 881 858 881 0.97

24 34 0.016 0.99 9.9 1.6 1 23 886 909 886 909 0.94

25 34 0.00097 0.062 13.7 2.5 2 23 912 934 911 934 0.95

26 34 0.79 50 4.6 0.6 2 21 941 960 940 961 0.93

27 34 0.17 11 6.7 0.9 1 23 1018 1041 1018 1041 0.97

28 34 0.01 0.66 10.5 0.2 2 23 1116 1138 1115 1138 0.92

29 34 3.8e-05 0.0024 18.1 0.3 3 23 1145 1166 1143 1166 0.95

30 34 0.00012 0.0077 16.6 1.9 2 23 1171 1193 1170 1193 0.95

31 34 0.0084 0.53 10.8 0.5 1 23 1198 1221 1198 1221 0.97

32 34 0.0023 0.15 12.5 6.2 1 23 1225 1248 1225 1248 0.97

33 34 0.036 2.3 8.8 1.7 2 23 1255 1276 1254 1276 0.96

34 34 3.9e-06 0.00025 21.3 1.3 1 23 1282 1304 1282 1304 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	34	0.0021	0.14	12.6	0.1	2	23	13	35	12	35	0.91
2	34	0.00042	0.027	14.8	3.3	1	23	39	62	39	62	0.96
3	34	0.001	0.066	13.6	0.3	1	23	67	90	67	90	0.98
4	34	0.065	4.1	8.0	0.4	1	23	140	162	140	162	0.95
5	34	0.52	33	5.1	0.1	3	23	190	211	188	211	0.91
6	34	0.0015	0.097	13.1	0.8	2	23	232	254	231	254	0.91
7	34	0.026	1.6	9.2	7.5	1	23	259	281	259	282	0.96
8	34	0.0003	0.019	15.3	0.6	3	23	288	309	286	309	0.96
9	34	0.53	34	5.1	2.4	2	23	312	334	311	334	0.93
10	34	3.2	2e+02	2.7	1.7	3	19	342	358	341	361	0.87
11	34	0.0004	0.025	14.9	4.6	1	23	411	434	411	434	0.97
12	34	0.92	58	4.4	0.4	2	23	463	485	462	485	0.94
13	34	0.08	5.1	7.7	0.1	3	23	508	529	506	529	0.94
14	34	0.0015	0.098	13.1	1.1	1	23	534	557	534	557	0.94
15	34	2.5e-05	0.0016	18.7	0.4	1	23	562	585	562	585	0.94
16	34	0.014	0.86	10.1	0.9	3	23	592	613	590	613	0.95
17	34	0.00017	0.011	16.1	4.5	1	23	617	640	617	640	0.97
18	34	0.014	0.89	10.1	0.9	3	23	648	668	647	668	0.98
19	34	0.00036	0.023	15.1	2.4	1	23	674	696	674	696	0.96
20	34	2.7	1.7e+02	2.9	1.9	1	23	738	760	738	760	0.97
21	34	0.89	56	4.4	0.1	3	23	789	810	788	810	0.84
22	34	0.43	27	5.4	3.1	2	23	831	852	830	853	0.94
23	34	0.0002	0.013	15.9	7.2	1	23	858	881	858	881	0.97
24	34	0.016	0.99	9.9	1.6	1	23	886	909	886	909	0.94
25	34	0.00097	0.062	13.7	2.5	2	23	912	934	911	934	0.95
26	34	0.79	50	4.6	0.6	2	21	941	960	940	961	0.93
27	34	0.17	11	6.7	0.9	1	23	1018	1041	1018	1041	0.97
28	34	0.01	0.66	10.5	0.2	2	23	1116	1138	1115	1138	0.92
29	34	3.8e-05	0.0024	18.1	0.3	3	23	1145	1166	1143	1166	0.95
30	34	0.00012	0.0077	16.6	1.9	2	23	1171	1193	1170	1193	0.95
31	34	0.0084	0.53	10.8	0.5	1	23	1198	1221	1198	1221	0.97
32	34	0.0023	0.15	12.5	6.2	1	23	1225	1248	1225	1248	0.97
33	34	0.036	2.3	8.8	1.7	2	23	1255	1276	1254	1276	0.96
34	34	3.9e-06	0.00025	21.3	1.3	1	23	1282	1304	1282	1304	0.99

Sequence Information

Coding Sequence: ATGCACATCCGTGATACCCACGTTGTCACCGAAATCGTTTGTGATCTGTGCGGGAAGAGATTTGTGAGGAACGCAGCTTACTTGATGCACAAAGAGTACGCACATGGTCCAGGCTTTACTTGCAAAGAGTGCGGGAAAGATTACTGCAGTAGCTTTAAACTGAAAACTCATGTCGCTAAAGAACACGAGGGGTTTAAATTCAAGTGTTCTGAATGCCCTGATGAGTTTCCTTCTCCTTACCAAAGAAAGAAACACATGATAACTGCTCACAGCACGGCTTCAGAATTATCGTTTCCGTGCCCTCACTATGGGAAACCTGAAGGGATCACGAAATTCACTGTCAATGAATGCAGACGGAGAAACCTCCAGACGTTAGTCAACAACTCCTCCGTGATACCGTTCAAATGGCGAGGCAAATACTTGTGCTACTTCTGTGGAATAGATATAGAAAATTACTTCGATTTAAAAGAGCACATGAAATCTCACATTCCCTGCTCGATTACCGATCGAGCAATGAAACTTATTAAAGGAGGAAACGAAACAAAAATAGACATATCTGAAATCAATTGCAACATTTGTTCGGAACAGTTTCCAATTATAGAAGATTTGATATCGCATTTGACATTGAAACACAAGCTATGGTATCATGAAGTCGCATCTCTGACGCTGAGGACATACCGACTGGCAGATTTAAAATGCATAGTTTGCAACGAGAGGTTCAAAATGTTCAGCAATCTCATACGGCATATGAATCTCAGTCATCCGGATAATTGCTTCCAATGTGATATGTGCAAccaaaagtataataaaaagcAAGATTTATCACATCACTTTCGAAATCATCACAAGAAAAATTATGGCTGTCCGAAATGTTCTGTGACGTTTTCGAATTTTTCGGATCTTTTGAAGCATAAAAGGGAAGAGCATTTGTCACGGTGCAATCTATGCTTCCAAACATTTTCGTCGTATAAGAGACGTCTGAGTCACATGAAGGACGAACATGAACTAGGGGACGGTGGATTTTGTGGATTTTGTAATAAACGGTTTCATACAAAACTCGGTTTTTTGGATCATGCAACGAAATGCAAGGTTTCTCCGCCGAAACCCGTAGAACTCCCTGTCGTCGTTGATGACAAGGATAAAAGTCAAAACCTGAAAGAAATCAGATCGTGTGTTACCTTCATCATCAACATGACCACTGCTATGCCCTTTAAGTTCTTTCATAATAAGTTCAAGTGCTTTTACTGTCCAAAAGACTTCACTTCTTGCAATGATCTCAGACAACACACGACGACTGAACATCCTGTATGCGAGACAACGTATCGTGCAATGAAACTGCGCGGACGATCCGATGGAATGAAAATTAAAGTTGACACATCTTCTCTATGCTGTAAAATATGCTTGGAAAGGTTTAACGATTTCATCGCAGCAATCAATCATTTAGAAACCGAACACAAGGCAGCCATCAAAAAATACATAGGTGTATTCCAAGCTTTTAATTTGGTACATGATAAGTTCGGTTGTCCGTTTTGCGAGGCAGAATTTAGATATTTCAGTTTGCTATTGCAACATGTAAATGCAAGCCACTCTGACAATCAATATATTTGCACTTTCTGCGGTAAGGCATTCGCTTCGTATCCAACCCTACGCGGACATCTCTCGCATTACCATTCGAGTGGTAGGTTCAAATGCAGCGACTGCAGTCTGGCATTCCCTACCAACAGCAGCTTGAAGGAACACATGGGGAACACGCACGGCAGTAAGGTTATTAACTGTCAGCGTTGCTCGGAGAAGTTCATCTCCCAGTATCGTATGATGAGGCACATCATGAAGGTTCACGACGGTGGTCATAAATGCTCGTACTGCGGCATGTCCTTCATCAAGTACTCGCATATGATAAACCACGTTAGAAGATTGCACCTTAAAGAGAAGAATGTGCTGTGTAGTGTTTGTAACCAACGGTTTTTTGACGCGAATCGTCTTAAGATGCATATGGTGCGGCATGTCGGCGAGCGGTTGTTCCGATGCGATCACTGCGGGAAGCGGTTCCTCAGAAAGAAGAACCTCAGGGGCCATGTGGCTCTTCACCTCAAGAATGGCAATGAAACGCCCGCCGACCCGGTCGACCGATTATCGACTGAGCGAAGGAGGAAAAACTTGAAAATCATATTCGATAACACGACAATTCTCCCCTTCAAGTGGCGAGGAACGTACATCTGTTTCTATTGTAGCGCTCCTATCCACGATTACATAGAATTCAGAAAGCACACCAAATCTCATGGTCTTTGCAACATCAAGAACTATGCTATGAAAAAGCTAAAGGGGAACGGGCTAGCGATTAACGTCGACGTATCCGAGGTCGCGTGTGAACTTTGCGAACGGCGATTCAAAAACCTAGAAGTGATTGTAGAACATTTGATTAAcgatcataattttttttacgaCAAGGAAATTTATAGTGAAATCATAGAGTACAGGCTGATTGACTTGCGTTGCACGCAGTGTGACCTGCAGTTCGAAGCTTTCAGGCACTTGGTCTCTCACGTCAATTATCATCATCCGcacagcatttttgtttgcCACCACTGTGGACGCAATTTCAGCAAGAAAGGACATATAAGGAACCACATTAATCGCTACCATCGACTGGCAGGTTACGTTTGCAAACAATGCGGATTGGACTGTAAAAGTCTTTTAGAACTGCGAAAACACACTGCAAACACTCATCTGACGCGATGCCACGTCTGCGGCAAGAAATACATGAAATTGAACAATCTGTCCAGACACGTCAAGCTCGAACATCCTAACGACGATAACAAAACGTGTGGCTATTGCTTGAAAGAGTTACATTCTGCGGTTGGTCTCAAACACCACATGGCTAAATGCAAAGTGAGGCTCCTCTCACAAGACGACACAGAAAGCGTTACTATCCCTGAGAGCAATAGCTCCGTAACCACGTCGAGAACGCACGAACAGATAGTGCGGATCCGCCAGAACATTCGATGCGTCCTCAACATGTCCACGGCGGTGCCGTTTAGGTTTAGAGTCAAATTCTCCTGCTTTTACTGTGCTCTCAAATATGACGACTACGAAGTGCTCAAACAACATACTCAAACGGAACATCCCGTCTGCGACATCGAAAGTAACCCGATGAAGAAATGTAAAGGAAAACGCACGTTCGTTAGAGTCGATATAGCGGCGCTTGCTTGTAAACTCTGCTCTGCTCCCATGCCAGACTTGAACCATTTTATAGATCACGCCATCGCCACCCACGATGCGAATTACGACAAAACCGTCAGTCTCGAGACTTGTTTTGAGCCTTACCGTTTAGTCAAAGGCAACATTCCCTGCCTGGAGTGTCCCAAAGTGTTCCGATACTTGAACACCATGCTGAGGCATTTTAACTTAGAGCACAGCAATAATAACGTGATTTGCGACTACTGCGGCCGCGGTTTCCGCAGTACCACTAACTTGAAGATGCACCTTCAGAACGCCCACATCGGCTCTTGCGAATGTAAGATTTGCAACGCCAAATTCAAGAACCAATCTGTTCTTGTGCGTCACATGGCGAAAAGTCACAACGAGAAGACTTTCAAATGCGCAAACTGTTCAGAGATGTTCGAGTCTGCGTATCAGAGGCAGACGCACCTGATCAGAGTGCACGGGATAGGCCACAAGTGCGAGTACTGCGGGAAGATGTTCACGAAGCACTCGTTCATGGACTCGCACGTGAGGCGAACGCACCTCAAGGAGAAGAACGTGTCATGCTCGGTCTGCAATGATAGGTTCTTTGATAATCACTTGCTGAGGATGCATATGGTGAAGCATGACGGTGAGAGGAAGTTTAAGTGCGAATTGTGTGGAAAAGCGTTTCTAAGGCAAAAGAATTTGCGGACTCACATGGATACTCACAAGAAATACGGGTTTGCACAGTGA
Protein Sequence: MHIRDTHVVTEIVCDLCGKRFVRNAAYLMHKEYAHGPGFTCKECGKDYCSSFKLKTHVAKEHEGFKFKCSECPDEFPSPYQRKKHMITAHSTASELSFPCPHYGKPEGITKFTVNECRRRNLQTLVNNSSVIPFKWRGKYLCYFCGIDIENYFDLKEHMKSHIPCSITDRAMKLIKGGNETKIDISEINCNICSEQFPIIEDLISHLTLKHKLWYHEVASLTLRTYRLADLKCIVCNERFKMFSNLIRHMNLSHPDNCFQCDMCNQKYNKKQDLSHHFRNHHKKNYGCPKCSVTFSNFSDLLKHKREEHLSRCNLCFQTFSSYKRRLSHMKDEHELGDGGFCGFCNKRFHTKLGFLDHATKCKVSPPKPVELPVVVDDKDKSQNLKEIRSCVTFIINMTTAMPFKFFHNKFKCFYCPKDFTSCNDLRQHTTTEHPVCETTYRAMKLRGRSDGMKIKVDTSSLCCKICLERFNDFIAAINHLETEHKAAIKKYIGVFQAFNLVHDKFGCPFCEAEFRYFSLLLQHVNASHSDNQYICTFCGKAFASYPTLRGHLSHYHSSGRFKCSDCSLAFPTNSSLKEHMGNTHGSKVINCQRCSEKFISQYRMMRHIMKVHDGGHKCSYCGMSFIKYSHMINHVRRLHLKEKNVLCSVCNQRFFDANRLKMHMVRHVGERLFRCDHCGKRFLRKKNLRGHVALHLKNGNETPADPVDRLSTERRRKNLKIIFDNTTILPFKWRGTYICFYCSAPIHDYIEFRKHTKSHGLCNIKNYAMKKLKGNGLAINVDVSEVACELCERRFKNLEVIVEHLINDHNFFYDKEIYSEIIEYRLIDLRCTQCDLQFEAFRHLVSHVNYHHPHSIFVCHHCGRNFSKKGHIRNHINRYHRLAGYVCKQCGLDCKSLLELRKHTANTHLTRCHVCGKKYMKLNNLSRHVKLEHPNDDNKTCGYCLKELHSAVGLKHHMAKCKVRLLSQDDTESVTIPESNSSVTTSRTHEQIVRIRQNIRCVLNMSTAVPFRFRVKFSCFYCALKYDDYEVLKQHTQTEHPVCDIESNPMKKCKGKRTFVRVDIAALACKLCSAPMPDLNHFIDHAIATHDANYDKTVSLETCFEPYRLVKGNIPCLECPKVFRYLNTMLRHFNLEHSNNNVICDYCGRGFRSTTNLKMHLQNAHIGSCECKICNAKFKNQSVLVRHMAKSHNEKTFKCANCSEMFESAYQRQTHLIRVHGIGHKCEYCGKMFTKHSFMDSHVRRTHLKEKNVSCSVCNDRFFDNHLLRMHMVKHDGERKFKCELCGKAFLRQKNLRTHMDTHKKYGFAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -