Basic Information

Insect: Operophtera brumata
Gene Symbol: -
Assembly: GCA_001266575.1
Location: JTDY01002088.1:42794-51605[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0026 0.16 12.4 1.2 1 23 63 86 63 86 0.93

2 27 0.2 13 6.5 0.5 2 23 160 181 159 181 0.96

3 27 0.00032 0.021 15.2 0.5 1 19 185 203 185 203 0.98

4 27 0.087 5.5 7.6 0.2 1 23 226 249 226 249 0.90

5 27 0.00016 0.01 16.2 1.0 1 23 255 278 255 278 0.97

6 27 0.00086 0.054 13.9 0.5 1 23 284 306 284 306 0.97

7 27 0.0034 0.22 12.0 1.7 1 23 312 334 312 334 0.97

8 27 4.7e-06 0.0003 21.0 0.2 1 23 340 363 340 363 0.98

9 27 0.0037 0.23 11.9 0.9 1 23 420 443 420 443 0.94

10 27 0.14 9 6.9 0.1 2 23 471 493 470 493 0.94

11 27 0.015 0.96 10.0 1.3 2 23 518 539 517 539 0.96

12 27 4.2e-05 0.0026 18.0 0.2 1 23 543 566 543 566 0.94

13 27 0.00075 0.047 14.1 0.4 1 23 585 608 585 608 0.97

14 27 5.5e-06 0.00035 20.8 0.8 1 23 614 637 614 637 0.98

15 27 0.0032 0.2 12.1 0.5 1 23 643 665 643 665 0.97

16 27 0.00013 0.0086 16.4 0.3 1 23 671 693 671 693 0.97

17 27 9.3e-05 0.0059 16.9 0.2 1 21 699 719 699 720 0.97

18 27 0.00063 0.04 14.3 0.8 1 23 788 811 788 811 0.94

19 27 0.94 60 4.3 2.3 2 23 838 860 837 860 0.93

20 27 0.00062 0.04 14.3 1.9 2 23 883 904 882 904 0.96

21 27 0.046 2.9 8.5 0.7 1 19 908 926 908 931 0.93

22 27 0.00045 0.029 14.8 0.5 1 23 950 973 950 973 0.95

23 27 0.00059 0.037 14.4 1.3 1 23 980 1003 980 1003 0.96

24 27 0.00017 0.011 16.1 1.3 1 23 1009 1031 1009 1031 0.97

25 27 0.00033 0.021 15.2 0.4 1 23 1037 1059 1037 1059 0.95

26 27 1.1 69 4.1 7.9 1 19 1202 1220 1202 1225 0.93

27 27 1.5 92 3.7 1.1 1 21 1323 1343 1323 1344 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0026	0.16	12.4	1.2	1	23	63	86	63	86	0.93
2	27	0.2	13	6.5	0.5	2	23	160	181	159	181	0.96
3	27	0.00032	0.021	15.2	0.5	1	19	185	203	185	203	0.98
4	27	0.087	5.5	7.6	0.2	1	23	226	249	226	249	0.90
5	27	0.00016	0.01	16.2	1.0	1	23	255	278	255	278	0.97
6	27	0.00086	0.054	13.9	0.5	1	23	284	306	284	306	0.97
7	27	0.0034	0.22	12.0	1.7	1	23	312	334	312	334	0.97
8	27	4.7e-06	0.0003	21.0	0.2	1	23	340	363	340	363	0.98
9	27	0.0037	0.23	11.9	0.9	1	23	420	443	420	443	0.94
10	27	0.14	9	6.9	0.1	2	23	471	493	470	493	0.94
11	27	0.015	0.96	10.0	1.3	2	23	518	539	517	539	0.96
12	27	4.2e-05	0.0026	18.0	0.2	1	23	543	566	543	566	0.94
13	27	0.00075	0.047	14.1	0.4	1	23	585	608	585	608	0.97
14	27	5.5e-06	0.00035	20.8	0.8	1	23	614	637	614	637	0.98
15	27	0.0032	0.2	12.1	0.5	1	23	643	665	643	665	0.97
16	27	0.00013	0.0086	16.4	0.3	1	23	671	693	671	693	0.97
17	27	9.3e-05	0.0059	16.9	0.2	1	21	699	719	699	720	0.97
18	27	0.00063	0.04	14.3	0.8	1	23	788	811	788	811	0.94
19	27	0.94	60	4.3	2.3	2	23	838	860	837	860	0.93
20	27	0.00062	0.04	14.3	1.9	2	23	883	904	882	904	0.96
21	27	0.046	2.9	8.5	0.7	1	19	908	926	908	931	0.93
22	27	0.00045	0.029	14.8	0.5	1	23	950	973	950	973	0.95
23	27	0.00059	0.037	14.4	1.3	1	23	980	1003	980	1003	0.96
24	27	0.00017	0.011	16.1	1.3	1	23	1009	1031	1009	1031	0.97
25	27	0.00033	0.021	15.2	0.4	1	23	1037	1059	1037	1059	0.95
26	27	1.1	69	4.1	7.9	1	19	1202	1220	1202	1225	0.93
27	27	1.5	92	3.7	1.1	1	21	1323	1343	1323	1344	0.87

Sequence Information

Coding Sequence: ATGATAACTCTCTTTATAGGTAGTAGTCCTGAACCTCAAACAGTACCAACCACAAGTGCAGCTGCCTCGGCCGATCCAATTTCTGAACTGTCACCGAGGCAAAGCAAAATACGAGACATCAAGCAAGTACTGCTCTGTTCGAATGCGACACCAATATGGTCCCATAATTCTCGCGCTAACATGTGTTACAAGTGCTCCTACTGCGAGCTGAAGTACGCAAGACTCGACAGACTCAAGAAACACACACTCGACGAACATGATGACATCACAGAAGCGCGGTTCTTCAGAGGCAAACACGACCTTTTCCACGAAATTTATGTGAAACTGGACATAACAGCATTGAATTGTAAGCTTTGCTGCGGGAATTTTGATGATATAAACACTCTGATTGAACACCTCAACCAAATTCATAAGAAGCGTGTTGATGTCAAAGTTACTAATTTTTTGCTGCCATTTAAATTCTTCTCGGAGACACTGTATTGTGGGATATGCTCTAAGAAAGATTCCACATTCAAAAGCCTGGAGCAACATCTGAATGTGCATATGAAAATTTATAAATGCAAGAAGTGTGATGAAGTTTTTACAACTTATCGAATGCTTCAAATTCACGATGATGCTGAGCATAAACATAATCCGCCGAAAAAGATAGTTAAAAGGAGAAGCAGCAATTTGCCCTTCCTTTGCCGGGAGTGTGGGGAGACGTTCCCCTCTGAGTATCGGCAGAGGGTCCATGTTGCAAAGGTGCATAAAGAACCGAATAACTACCATTGCAAGGCTTGCGACCGAGTATATGATAGAGCTGACGAATTGAGAGTTCACACAAGAAGAGATCATTTGATGGAGAGACGCTTTAAATGTAAAGTGTGTGACAAAGCGTTCTATGCGCAAGCGACTATGTTAAAGCATGAGTTGAGCCATTCGAATGAGAAGAAATACTCGTGTGATGTGTGTGGGAAGGCGTTTAAGTGTAAAACGTCTCTATTTCCTCATATGCAAATTCATGCAGACGATCGGAGGTTCAAGTGTGAAGTGTGTGGACGAGCGTTCGTACAAAAAGCATCTTGGCAAGGACATATGCGGTCCAAACATGATCTTACATTTTcggGTAACCCCGAACCAGAAAAAGTGCCAACAACTGCAGCTACCTCGGCAGATCCAATCTCTGAAATGTCATCAGCGCAAAGAAAATTACACGGTATCAAGCAAGTACTGCTCTGGTCGAATGCGACTCCATTACGGTCCCATTCTGGACTCGGGTACAAGTGCTCGTACTGCGAGCTGAAGTATCCCCGACTCGACAGACTCAAGAACCACACCCTGGAGGAGCACGATGATTTCACAGAAGCCCGGTTCCtcaaaacttattatttataccaAGACAGTGTTATTAAGCTGGACGTAACGTCTCTGAGTTGTAAACTTTGCTCCGCAAATTTTGACAACTTAATAACCCTTATTGAGCACCTCAATGAAACCCACAAGAAGCGTATTGGCGCTGACGTGGAATTAACGAGCCATTTTTTTCCATTTAGTTTCGACTCGGAAGAACTACATTGTGGAGTATGCTCGAATAGATATACCTCATTCGAAGACTTGGAGCAACATATGAAACTGCACCTGAAGATTTTTAATTGCAATATTTGCGATGAAGGATTTACAAGTCAAGGAAAACTTAATGCGCACTATAACGCTACTCATAGAAACAATAAACCgtcgcaaaaaaataaaaaaatacgggaCCCTAGCAGGCGTTACACTTGTCCAGAGTGTAGTGAAACATTCCCCACTCCGTATTCACACAGGGTCCATGTCAGAATAGTGCATAAAGGGCCAAGAATCTACCAGTGTAAAGCTTGCGACAGAGCATTTGTACGACGTGACCAATTGAGGATACACACTAGAAGAGATCATTTGATGGAGAGACGCTTTAAATGTAGAGTGTGTGACAAAGCGTTCTATGCGCAAGCGACTATGTTAAAGCATGAGTTGAGCCATACGAATGAGATGAAATACGCGTGTGATGTGTGTGGGAAGGCGTTTAAGTTTAAAACGTCTCTGTATCCTCATATGCAGATTCATGCAGGTGATCGGAGGTTCAAGTGTGAAGTGTGTGGACAAGAGTTTACACAAAAAGCATCTTGGCAAGGACATATGCGATTTAGAGCATTGGAGACCTCCGTATTATCAGATGATGTTCAGATCCTTCAGGAGGACCTGCGTGAGTTTAGAACTCTCAAGGTCAGCGCTACCTCGGCCGATCCAATCTCTGAACTCACACCGAGGCAAAGAAAAATACGAGACATGAAGCAAGTTCTGCTCTGGTCGACTGCGACACCAGTTTGGTCACATTCTGACGTCGGGTACAAGTGCTCCTACTGCGAGCTGAAGTACCCCCGACCCGACAGACTCAAGAAACACACACTCGAGGAGCATGATGACATCGCAGAAGCGCGGTTCCTCAGAGCTCATTACTTCACCGACGTTTTTGTGAAACTGGACTTAACAGCATTATGCTGCAAACTTTGCTGCGCGAGTTTCGATAATTTGGACACTCTTATAGCTCACCTCAACCTGACCCACAAAAAGCGTATTGAAGCAGACATTGCTAATAACCTCCTTCCATTCAAATTTTACTCGGAGACGCTGCATTGCGGGATATGCTCTAAGACATATTCCACATTCAAAACCCTCGAGCAACATCTGAATGTGCATAGGAAGATTTATGAATGCAAAATTTgtgatgaaattttcacatgtAAAGGAAAACTTCAAATTCACGATAATgctgttcataaaataaatagtctGCCGAAAAAGATCATCCCAAAGAAGGGCTCCAACTGGCCTCACGTGTGCAAGGAGTGTGGCGAAAGATTCCCGAATAGATATACAATGGTGGTTCACGCTAACAAAGTGCACAAAGGACCAGCTAATTATCATAATTGCAACGCTTGTGACAGAGTCTTTGAACTGAAACAACAGTTAGTGAAACACATTAGAAGAGATCATTTGATGGAGAGGCGTTATCAATGTAGCGTTTGTAGTAAGGCATTCTTCACCAATAGTTTTCTTTTGAAGCATGAGGTGACTCATTCGGGAGAGATGAAATACTCGTGTAATGTGTGTGGGAAGAGGTTCAAGTTCAAGACGTCGCTCGGACCTCACATGGCGATACATAGCGGCGTCAGGCGGTTCAAGTATGTCCTCAGCAGCACCGATGAAGACGAGCTGCCATTGGCCGCAGAGAAAAGTATAACACTCTGCAGGAAGGTCAACTTCTCATCCTTCATCTCGATACCGCCCGGGGGAACCCCCGAAACTAATAAGACCTCCCACAAAAAGAAGAAGCTAccacaaaaagtacaaaaacgTAAAATTTCAGAGGTTGTTGAAGAAAAACCACCAGAAAAGGTTGAGCTGAAGCGCACATTGCCTACGCGCAAAAGTGCTTCGAAACGCAAAAACACCAGCGAGCAGAGAGTCAAGATCCCGCACCCTAATCCGAAGACGAGGCTCACAGAAATGGACTGGCATTTAGACAACATTAGAACCATTCTCAACTGTTCCAACGCCACGCCAATCCACGCTAAGGAAGACGGAGGGCACTCCTGCAGCTACTGCTTCCAGAAGTTCTCCAAGCTCACCGAACTCAAAAAACATTGCTTCTCCAACCACAAAAAGGGCAAGCCGGACTTCCTTAAAATGAGACCCGGCAAGATTCTATCAAAGCATATAGTTTACTTGGATATCTCCTCCCTGAAGTGCAGAGTTTGCCGCGCGGATATAGAGAGTCTTGAGATGCTGATGGAGCATTTGCAGAATGCACACGATGAGACCATGCACTTGGTTATTAAGAACCAGATAATGCCGTTGAGGGTGGTCGATGAGATTTTGCGTTGCGCCGTGTGTGCTGTCGACGTTGAGTTCGACAAGGTCGCTGACCACATGAGTCAGCATTACAGGAACTATGTGTGCGAGTTCTGCGACGCCAGCTTCGTGATCCGTTGCAAGATGCTGGACCATAAGAAGACGggtacataa
Protein Sequence: MITLFIGSSPEPQTVPTTSAAASADPISELSPRQSKIRDIKQVLLCSNATPIWSHNSRANMCYKCSYCELKYARLDRLKKHTLDEHDDITEARFFRGKHDLFHEIYVKLDITALNCKLCCGNFDDINTLIEHLNQIHKKRVDVKVTNFLLPFKFFSETLYCGICSKKDSTFKSLEQHLNVHMKIYKCKKCDEVFTTYRMLQIHDDAEHKHNPPKKIVKRRSSNLPFLCRECGETFPSEYRQRVHVAKVHKEPNNYHCKACDRVYDRADELRVHTRRDHLMERRFKCKVCDKAFYAQATMLKHELSHSNEKKYSCDVCGKAFKCKTSLFPHMQIHADDRRFKCEVCGRAFVQKASWQGHMRSKHDLTFSGNPEPEKVPTTAATSADPISEMSSAQRKLHGIKQVLLWSNATPLRSHSGLGYKCSYCELKYPRLDRLKNHTLEEHDDFTEARFLKTYYLYQDSVIKLDVTSLSCKLCSANFDNLITLIEHLNETHKKRIGADVELTSHFFPFSFDSEELHCGVCSNRYTSFEDLEQHMKLHLKIFNCNICDEGFTSQGKLNAHYNATHRNNKPSQKNKKIRDPSRRYTCPECSETFPTPYSHRVHVRIVHKGPRIYQCKACDRAFVRRDQLRIHTRRDHLMERRFKCRVCDKAFYAQATMLKHELSHTNEMKYACDVCGKAFKFKTSLYPHMQIHAGDRRFKCEVCGQEFTQKASWQGHMRFRALETSVLSDDVQILQEDLREFRTLKVSATSADPISELTPRQRKIRDMKQVLLWSTATPVWSHSDVGYKCSYCELKYPRPDRLKKHTLEEHDDIAEARFLRAHYFTDVFVKLDLTALCCKLCCASFDNLDTLIAHLNLTHKKRIEADIANNLLPFKFYSETLHCGICSKTYSTFKTLEQHLNVHRKIYECKICDEIFTCKGKLQIHDNAVHKINSLPKKIIPKKGSNWPHVCKECGERFPNRYTMVVHANKVHKGPANYHNCNACDRVFELKQQLVKHIRRDHLMERRYQCSVCSKAFFTNSFLLKHEVTHSGEMKYSCNVCGKRFKFKTSLGPHMAIHSGVRRFKYVLSSTDEDELPLAAEKSITLCRKVNFSSFISIPPGGTPETNKTSHKKKKLPQKVQKRKISEVVEEKPPEKVELKRTLPTRKSASKRKNTSEQRVKIPHPNPKTRLTEMDWHLDNIRTILNCSNATPIHAKEDGGHSCSYCFQKFSKLTELKKHCFSNHKKGKPDFLKMRPGKILSKHIVYLDISSLKCRVCRADIESLEMLMEHLQNAHDETMHLVIKNQIMPLRVVDEILRCAVCAVDVEFDKVADHMSQHYRNYVCEFCDASFVIRCKMLDHKKTGT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -