Obrm008223.1
Basic Information
- Insect
- Operophtera brumata
- Gene Symbol
- kn
- Assembly
- GCA_001266575.1
- Location
- JTDY01002486.1:45210-54461[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 7.1e-52 4e-48 164.0 0.0 210 294 3 95 1 96 0.98 2 3 2.3e-32 1.3e-28 99.6 0.1 335 387 96 148 94 153 0.98 3 3 6e-06 0.034 12.4 2.6 421 519 157 262 149 269 0.80
Sequence Information
- Coding Sequence
- ATGTTGGTGGTAATATCAACGCAAGTGATGGTGGACGGTCCTCTGCTAGCAATATCCGACAACATGTTCGTGCATAACAACAGCAAACACGGCCGGAGAGCGAAGCGACTCGACCCTACTGAAGCGGGTCTCTACCCTCCGCTACCCGTGGCTACCCCTTGTATCAAAGCGATATCACCGAGTGAAGGCTGGACATCTGGAGGCTCCACTGTTATCATAGTTGGTGATAATTTCTTCGATGGACTACAAGTTGTGTTTGGGACCATGCTTGTTTGGAGTGAGGTAACAGCGCTCAACGAGCCGACGATAGATTACGGCTTTCAGCGGCTTCAGAAACTTATACCGAGGCACCCCGGCGACCCGGAAAAACTACCGAAGGAAATTATCCTAAAACGTGCAGCGGACCTAGCAGAAGCGCTATACAGCATGCCTCGGAACAATCAATTAGGCCTAGGAGGTCCAAGATCACCTTCTAGTATGCCTTTCAACTCCTACACGGGGCAGTTAGCTGTCAGCGTCCAAGACACGGCTGCTTCACAATGGACTGAAGTGTCACTAGGGCCGTATCACCCTGCCAACATGAATGGACTATCTGACCATCACTATAACGCGTATAATACGAAAGATAGCACGTATTACACTGAAAGGAATGATTCTAAGAGCGGTGCTGACTGTCCGGCAAACACTCACTCAAAATGCACGACTGGAATGAAAGGGGATGAGAATAAAGGCGGAAAAAGGAGCGCTTTTGCGGTAGTGAGACAGAGTCCACCAAGGGTGCCCAATGCTCAACTGTCGCACCACAATTGGCAGCTCGCAGTCCAATGTTAG
- Protein Sequence
- MLVVISTQVMVDGPLLAISDNMFVHNNSKHGRRAKRLDPTEAGLYPPLPVATPCIKAISPSEGWTSGGSTVIIVGDNFFDGLQVVFGTMLVWSEVTALNEPTIDYGFQRLQKLIPRHPGDPEKLPKEIILKRAADLAEALYSMPRNNQLGLGGPRSPSSMPFNSYTGQLAVSVQDTAASQWTEVSLGPYHPANMNGLSDHHYNAYNTKDSTYYTERNDSKSGADCPANTHSKCTTGMKGDENKGGKRSAFAVVRQSPPRVPNAQLSHHNWQLAVQC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01099621;
- 90% Identity
- iTF_01099621;
- 80% Identity
- iTF_01099621;