Obrm005842.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Operophtera brumata
Gene Symbol
REF6
Assembly
GCA_001266575.1
Location
JTDY01001507.1:70078-87094[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.4e-12 6e-09 36.1 0.0 4 87 914 998 911 999 0.79

Sequence Information

Coding Sequence
ATGCGGAAAAACAAaaaaaaacgaaGAGCTCAGCGGAAGTTTGCTCAGGGTGCATTTATTCCACCGCAAAACAATGCCTCCACATCAGCTCTGTTCTCGCCTACTCCTCACGCACACAGGGCTGGGAGTGTGCCAGGCCCGGTCATGCTCAACGGCTGCACTGCGCAAGACTTGCTCACCAGGACCTCTTTAGGAAAAGCCCATGAGCATATCTGGCTACCTGTAGTAAGCTTAGAATCTGATTACGGAAAGATAAATAGCGAAGCAtcaccgaaaaaaaaaattaaggaaaggaaaaacatcaaattaagcactaaaaagaaaagaaatattCTGCGAAATCGACGAAAAATCTCTTCAAATTTACCCAATACGCGTCGCGTTAGTGTAAGCGACAGCGGCGAGGATACGCCTCTAAGCTACTTGTCGGGTTCACGAATGCTCATAGCTCCAAATGTGACCGCCGTGGTGTCAGCAGTTGTTAAAGAACCATCGCCCAAGGTGGCGTCAGTCGTTGTTGAAGAACCAACTGCGTCAGCCATCATGGAAGAAATGACACTGCCGTCGATAGCAGACATCGAAGAAACACATGGAGGTGTTTCATCCATCCATCTACGGAAGCGTTCGTCTTTAATTCCGGTGATTCTATCGGTTGACACCGGACCTTCTAAACCAGAATATTCCACTCTACATCAGATACCGGGGCTATTACGTAAGAACACGCATTCCTCCAATCAGTCACGAATGCCATCCAACTGCAAAATGTTGGTGGAGGATGTTGCTGACACTACACCGAAACATGCCACTGAACTCTCACCTTCATTACTGACATCTCCACGTATATCCAACAAGCGCACGTCGTCCGGTTCTAAAACTGGCCATGAGCAGACACGCGAGGGGCGCACTCTTACCGCGACGTCAAGAAAGAGCCAGCGCCTGAAGCGAACAACTAAACCCTACCAGGACAAAGAATATTTATATGCCTTTTCGGATATGTCATCTATTGCTAGTCGCCGGCAGCCTTGTGCTTCAAAGAGTGGAGATCCTGATTTCTTACCCAAATCTGCGATAGCTTCGgtaacaaatttaaaatcacaaaaattTAGAGCTGTAAAGGGTAAAGGTATTATAAACAGTCAAAGAAATAAAGTCAAAAGGCAAAAAACTGAATCAAAACTAACGACTCCACGTAATTGTGCTCCTCAAGAATGTGaagtagataacataacaatGCCAATGGAGGCACATGACCAACAGCCATCATTTTCAAAGCGAGCAACTAAACCCTACCAGGACAAAGAATATTTATATGACTTTTCGGATTTATCATCTCTTGCTAGTCACCAGCAGCCTTGTGCTTCAAAGAGTGGAGATCCTGACTTCTTACCCAATTCTGCGACAGCTTCGTCAACAAATTTAACATCAAAAAAATGTAGAGCTGTAAAGGGTGCCCCTCTCAACACAACAAATATGTCAAACGATCAGACAGCGGAGTGGGTCAGAACTCATTATTACCAACGAGATATGCCAAGAAAAACCGTTTCAGAAAGCAGGTCTTTCGTCCCTGGAAGCAGCAGTTTCATGGCTAGTAGGAGCAGCAGTATCACCGCTTTCAGCGACGAAAGTATAATTGCTCCAGAAAGCAGCAGCGCAGTGCCATGCGCCTTAACCCTAGGACATCCAGTGGGAGCTGGCAACCACTTTAAAATGCCGGAACTGCCAGCGCGTTTTGCTAAGCTCACGAAGAATTGTCCGACTCGTTTTATTCGTAGCTTACAGGACCTGCTAAATAGTCACCCCACTAAAAAAGACTCCTTTTGTAATTTGTGCCGCCGGTGCGAGCTATTatccaaatataaaaaagttgCAAGACTATTACCGATCAGCGTAGCGAACGAGCCTGACATATTGGAAATGCCGCCGCATGATGTGTACGAGTTTGACTCCGATGAAGAGGGAATCAAAGTACTAAGACGTGGGAGGGAGCTCGTTCTTAATGTGCTCACTACTAAGAGGTTTCCAATTTGGCTGAGCAATCTGGAAATGAACTTGAAGAAGACTATGTTTAAAGATGAACATAAACTTGGTACATTAAAAAGAAATATAACATTTGAAAAGGATGACGTTACGGACGCATTGGTAAACAAGGTCATAACAAGAGTCGACTATCTCGCTCGGTGTATCGCCGAAGATAAGAAGGAGCTAGATCTAGAACGATCTCGGCAGAGGCTACGGTCGTCGAAGCGCGCTCAGTCGAGCTCGGATCAGCGCAGGAAGGTTCTGCGCCCGCGCCGGAAAGTAATGCGCCTGCGCCGAAACCCGGGCCAACCGGCGCCTGCTGCGGCTTCCACGATGCATGCAGAGGATTCCATGAATCCGCCAGCAGAAGCATCATCGTCTGAGACACGTCATCTAGTGGTCCGTTTGACGCCACTAGAAGTCGTTCCGGAGTTAGCGGAACATTCGACGCCACTGGAAGACGTCTCGCAGCGGGTGGAACGTTCGACGCCACTAGAAGACGATTGGGAGCTAGAAGGACGTATGATGGCAGTAGAAGACGTTCGGGTGTTGGTGGAACGTATGACACCCCTACAAGACGTTCCAAAGCTGGATCCCATTGCTTACATCGAGAAAATTGAAGCTAAGGCTTCAGAATTCGGCATATGTAAAATAATTCCTCCCAAGGGATTTAATATTCCCTGTCACCTGGACAATAGTTGTATGTTTACAACGATTAACCAGTATCTGGGCCGCTTGTACCAGAGATGGGGAAAGAATACCAGAGAGATGACTACCATACAGACCTACCTCGATGGAGTTGAACTGGATTTAGTCAAACTCTATCACCTCGTGCTGGAGGAAGGTGGAATCGAAGAGCTTTTGGCGCACCGAGAGACATGGGCTCGTATTGCAGAACAGATGTCGCTGGTGTCGCCACGCGGAAAACCTGATCCCAAAAAACTTGAGAAGCTTTACTGCAAACATGTGCTGCCGCGATACAGTAGACGACGGAATTATGATGGTGGTTGCTTGTTCACAGACGATCGTAAAATAATTCGAAATAAAGTAGACCACGTTTGGAAGAACCGGGTGAAGGTTGTGACCCGGCGCGCCAAGCGGCCGTTGCACGACAAGCGGCGCATGCTCGGCGAGACCGTGTCAGACGACGACGAGGACCTGGATTCGGACAACGAGACGCGCGAAGTGCGCACCGTCGGCAAGCCGTGCTTCGACCGCGCTGAGGAATGCACCGGCACGCACAAGGGACGCCCCATGAACCTTGCCACCTTCCGCCGGATAGCGGCACAGATCCAGGCGATGCGGTTCCCTAACGAGCCGGCGCCGTCGACCGAGGACGTGGAAGAGAAGTACTGGAGCATCCTCTCGCTGAGCAACGAGCACGTGTGCGTGCTGTCCGCCTTCATCGACACGTCCGTTGACAGCTTGGGCCACCCTGCGGACCCCGCAGCGCCGGGTGGCAGCCATCCCTGGAACTTGAAGCGCCTGAGCGAGAATCCACGGAACATCCTGCGCTCGCTCGGCAAGACCCTGAGCGTGACTGTGCCGACGCTGTGTCTCAACCAACTGTACGCGGTCGCACAGTCGGGTGCGGCGAAGTTCCGGTGCGCGGTGGAAGTGCTGATCCCGTCCGCCGTCCAGAACAAGGGCATCTGGCTGACGTCCGACACCACCATGATCCCGCCCGGCATGCTGCTGGCGCAGGGCGTGCCGCTGCGCCGCCTCGAGCAGCAACCCGGCGAGTTCATCGTGGTCTTCCCCGGCGCATACGCCTCGTCCATCGCCACTGGACTCACCATATCAGAGTGCATATACTTCGAGAGCAAGCGTTGGTTGTACAACATCGATAGTATTTTCCAGGCCATGCAGCAGGACTGCGAGCCGGCGATGTTCTCTAGCACGTTGCTGCTGTTGCGTATGGCGCGCGAGCCCACGCTCAGCCTCGACATACTGAGGCAGGTGCTCAGCTCCATCAAGAAGCTGCTGGTGGTCGAATTCGACTGTCGCCGCAAAGCAATCAAGTTCAAGTGCAGGATACTACTAGACCAGAGTGATCGATCGGATGGGGAGCAGGCGCCGGTCTCGTGGCCCAATCAAGAGGAATGCAGTATTTGCCGCGCGCCACTCATCCTCTCCACGACATGCCGTTACAACGATCCGCGCTCGGTGACGTGCCTGGAGCACGGGCTGGCGTTGTTCAACGCGGCGGGCCCGGACGAGTGCGCCAAGCCGCCACCCGTCACGTTACTCTACTCCAATCAGGAGCTGCAGGCAATCGTCGATGCGCTCGAGCGCCGCGTCATTGAAGCCGCATCGCCCTTCTCTAaagATAAAGTCACAAAGACCACATAG
Protein Sequence
MRKNKKKRRAQRKFAQGAFIPPQNNASTSALFSPTPHAHRAGSVPGPVMLNGCTAQDLLTRTSLGKAHEHIWLPVVSLESDYGKINSEASPKKKIKERKNIKLSTKKKRNILRNRRKISSNLPNTRRVSVSDSGEDTPLSYLSGSRMLIAPNVTAVVSAVVKEPSPKVASVVVEEPTASAIMEEMTLPSIADIEETHGGVSSIHLRKRSSLIPVILSVDTGPSKPEYSTLHQIPGLLRKNTHSSNQSRMPSNCKMLVEDVADTTPKHATELSPSLLTSPRISNKRTSSGSKTGHEQTREGRTLTATSRKSQRLKRTTKPYQDKEYLYAFSDMSSIASRRQPCASKSGDPDFLPKSAIASVTNLKSQKFRAVKGKGIINSQRNKVKRQKTESKLTTPRNCAPQECEVDNITMPMEAHDQQPSFSKRATKPYQDKEYLYDFSDLSSLASHQQPCASKSGDPDFLPNSATASSTNLTSKKCRAVKGAPLNTTNMSNDQTAEWVRTHYYQRDMPRKTVSESRSFVPGSSSFMASRSSSITAFSDESIIAPESSSAVPCALTLGHPVGAGNHFKMPELPARFAKLTKNCPTRFIRSLQDLLNSHPTKKDSFCNLCRRCELLSKYKKVARLLPISVANEPDILEMPPHDVYEFDSDEEGIKVLRRGRELVLNVLTTKRFPIWLSNLEMNLKKTMFKDEHKLGTLKRNITFEKDDVTDALVNKVITRVDYLARCIAEDKKELDLERSRQRLRSSKRAQSSSDQRRKVLRPRRKVMRLRRNPGQPAPAAASTMHAEDSMNPPAEASSSETRHLVVRLTPLEVVPELAEHSTPLEDVSQRVERSTPLEDDWELEGRMMAVEDVRVLVERMTPLQDVPKLDPIAYIEKIEAKASEFGICKIIPPKGFNIPCHLDNSCMFTTINQYLGRLYQRWGKNTREMTTIQTYLDGVELDLVKLYHLVLEEGGIEELLAHRETWARIAEQMSLVSPRGKPDPKKLEKLYCKHVLPRYSRRRNYDGGCLFTDDRKIIRNKVDHVWKNRVKVVTRRAKRPLHDKRRMLGETVSDDDEDLDSDNETREVRTVGKPCFDRAEECTGTHKGRPMNLATFRRIAAQIQAMRFPNEPAPSTEDVEEKYWSILSLSNEHVCVLSAFIDTSVDSLGHPADPAAPGGSHPWNLKRLSENPRNILRSLGKTLSVTVPTLCLNQLYAVAQSGAAKFRCAVEVLIPSAVQNKGIWLTSDTTMIPPGMLLAQGVPLRRLEQQPGEFIVVFPGAYASSIATGLTISECIYFESKRWLYNIDSIFQAMQQDCEPAMFSSTLLLLRMAREPTLSLDILRQVLSSIKKLLVVEFDCRRKAIKFKCRILLDQSDRSDGEQAPVSWPNQEECSICRAPLILSTTCRYNDPRSVTCLEHGLALFNAAGPDECAKPPPVTLLYSNQELQAIVDALERRVIEAASPFSKDKVTKTT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-