Basic Information

Transcription Factor Domain

TF Family: CP2
Domain: CP2 domain
PFAM: PF04516
TF Group: Beta-Scaffold Factors
Description: This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 4.1e-06 0.035 13.3 0.1 26 50 74 98 62 99 0.90

2 3 3.3e-08 0.00028 20.2 0.2 80 116 98 132 97 132 0.96

3 3 1.3e-21 1.1e-17 64.0 0.7 154 221 130 193 127 195 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	4.1e-06	0.035	13.3	0.1	26	50	74	98	62	99	0.90
2	3	3.3e-08	0.00028	20.2	0.2	80	116	98	132	97	132	0.96
3	3	1.3e-21	1.1e-17	64.0	0.7	154	221	130	193	127	195	0.93

Coding Sequence: gaaGCCCTTCTGTCGCTGCCATCATTGGCAGTCTTCAAGCAAGAGGCTCCGTCTCCTACCGGCGCCGTGCTGTCCCCGCCGCGTGGGGCCTGGCCCCATCGCCGCCCTGATGACAGACAGAGGCCTCATACATCATTGGCAGTCTTCAAGCAAGAGGCTCCGTCTCCTACCGGCGCCGTGCTGTCCCCGCCGCGTGGGGCTTGGCCCCATCGCCGCCCTGATGACAGACAGTTCCAGTATGTCCTCGCGGCAGCCACCTCCATAGCCACGAAGCAGAATGAGGAGACCCTCACTGTGATCAAAATTTGCTTCCACGAGCGCCGTCTCCAGTACATGGAGCGGGAGCAGATCTCGCACTGGCACGCCGAGCGGCCGGGGGAGAGGATCGTGGAGGTGAACTGCATCTCGACGGAATTCACCGCCAAAAAGCACGGCGGCGAGAAAGGCGTGCCGTTCCGTATACAGGTCGAGACCTGCTTGGCGAGCGACGAGCTCAGCCGTCTGCATGCGGCCGCCTGTCAGATCAAGGGAGCCGATCGCAAACACAAGCAAGACAGAGAGAAGGTGATGCGTCGCTCTCGCTCTGACATCGATAAGTACCAGCCAGGATGCGAGGCCACTGTTCTCACTACATTGTCCAACGATGCCATGATGCCGCCGCCGTCGCTGGTCACCACCTCGCCGCCATACTCTCCAGAAATATGG
Protein Sequence: EALLSLPSLAVFKQEAPSPTGAVLSPPRGAWPHRRPDDRQRPHTSLAVFKQEAPSPTGAVLSPPRGAWPHRRPDDRQFQYVLAAATSIATKQNEETLTVIKICFHERRLQYMEREQISHWHAERPGERIVEVNCISTEFTAKKHGGEKGVPFRIQVETCLASDELSRLHAAACQIKGADRKHKQDREKVMRRSRSDIDKYQPGCEATVLTTLSNDAMMPPPSLVTTSPPYSPEIW

Sequence clustering based on sequence similarity using MMseqs2