Basic Information

Insect: Ooceraea biroi
Gene Symbol: stc
Assembly: GCA_003672135.1
Location: NC:3149181-3159796[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.59 3.4e+03 -2.4 0.6 14 19 482 487 479 487 0.76

2 14 0.13 7.4e+02 -0.3 0.2 4 10 516 522 515 524 0.94

3 14 5e-06 0.029 13.8 12.9 3 18 531 546 530 547 0.92

4 14 1.7 9.5e+03 -3.9 0.4 6 10 573 577 572 577 0.86

5 14 2.8e-08 0.00016 21.0 15.6 1 18 583 600 583 601 0.98

6 14 5.1e-07 0.0029 17.0 14.2 1 19 639 657 639 657 0.98

7 14 0.45 2.6e+03 -2.1 1.4 5 10 686 691 686 691 0.96

8 14 8.2e-05 0.47 9.9 12.2 4 18 704 718 697 719 0.86

9 14 2 1.1e+04 -4.6 1.6 5 10 748 753 748 753 0.90

10 14 0.0083 47 3.5 11.3 1 11 759 769 759 781 0.88

11 14 2.8e-09 1.6e-05 24.2 9.9 1 19 786 804 786 804 0.98

12 14 2 1.1e+04 -8.7 11.7 10 19 851 861 837 861 0.76

13 14 1.5e-05 0.087 12.2 13.6 1 16 897 912 897 923 0.86

14 14 5.5e-06 0.031 13.7 13.4 1 19 929 948 929 948 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.59	3.4e+03	-2.4	0.6	14	19	482	487	479	487	0.76
2	14	0.13	7.4e+02	-0.3	0.2	4	10	516	522	515	524	0.94
3	14	5e-06	0.029	13.8	12.9	3	18	531	546	530	547	0.92
4	14	1.7	9.5e+03	-3.9	0.4	6	10	573	577	572	577	0.86
5	14	2.8e-08	0.00016	21.0	15.6	1	18	583	600	583	601	0.98
6	14	5.1e-07	0.0029	17.0	14.2	1	19	639	657	639	657	0.98
7	14	0.45	2.6e+03	-2.1	1.4	5	10	686	691	686	691	0.96
8	14	8.2e-05	0.47	9.9	12.2	4	18	704	718	697	719	0.86
9	14	2	1.1e+04	-4.6	1.6	5	10	748	753	748	753	0.90
10	14	0.0083	47	3.5	11.3	1	11	759	769	759	781	0.88
11	14	2.8e-09	1.6e-05	24.2	9.9	1	19	786	804	786	804	0.98
12	14	2	1.1e+04	-8.7	11.7	10	19	851	861	837	861	0.76
13	14	1.5e-05	0.087	12.2	13.6	1	16	897	912	897	923	0.86
14	14	5.5e-06	0.031	13.7	13.4	1	19	929	948	929	948	0.97

Sequence Information

Coding Sequence: ATGGCCACCTGGGACGGCTCGTATGCGGAGGATCCCAGTTACCTCGTGTATTCCGATCAGAGTATGTCCGACAAGACCACCGCGGGAAATTGGCCACACTTTGCAGGGAATCCCGCGTATCTGCCAAACGCTTCCGCAACGCTCGGGAGAAATTATTATCCGGCAGCCGGCGGAGGCCGGCACTTATACGGGCAGAACAACGGATCCGTTTCTGCTCTGAGGAATCAGGTTGCTGCGGACGGTGTTCTACCGTCGATGCCATCGACCATGGTACCTGTAAGAAACCCCTATCAGGAACACATACTGCCAAGCACCGCGTCTGTGAACAGCCCGTCAGATGGTTTGCAATATTCAGCAAACAGTATCGCCTCAACTTCGCATAGCGCATCGTTTTTCCATGGTAATAATCAGAAAGCAAAGTACAGGAAAAGAAGAACGACCAATAGTAAGCACACGCTGTCAGCGGAAGGTGACAGCGTCAGATCCGATATAGTGGAGAACTCGAAATTACATGCTACAGCCAACGAATTTGTGCCAAACAACGTTAAGTTTAAGAGGGATAAATTTAGTAAGTGGAATGGTCGCAGCAATGCACCGGGAAATAGCTTTAACGCCTCCGCGCAAGCTTTTCGATCGAAATCATTCGCGATGAATGCGTCTCTACTGGATAATAGATACAAAAATGAGAGCTATTTCAATAATAGGAGAGATGGGAATTACAAACAGAGGAACTCACAGCAGAGTATGCAAGCACTGCCAAGATCTAGTTACAATGATAggtcgtataataaatttcagaaCGGCAAATATCACAATAGGAAACATCAATCTGATGTGTCCTCTGTAGGGGATGCTCACACGTCTACGACTGAGCTTGGTGTTTCAGCTGCATCGAATAGTCAGCAAACTAAGGCCTCTATTGAGGAGTTCCAGAAGGATGATTCATCTCTAAACACAGAAATGAGTACAAATAGAGAGGTATTCACCGGCGAGAATAATGATCCAGATAATGCATCGCTGTTGAAAGTCGACACACAACGAAGTAGATCTAAACGATTCAATACTGCTAACTCACTGAATTATTCCAAAAGCGATTTTTATGATGACCAATCAGAGTCTAGATATAATAAAACCATGAGATATCCGCGTAGAAGAAATGAAGCGAATACAAGTAAGGAAAAACTGGACAACTGGAGGGATAAAAAGGAGAATAAGGACACAGCGCAAGGGAAGAGTCTGAGCAAGAAATACGAAATTGATGACGACGCGAGTCAAAGGGAGAGATTAATGGAGCAGCTGAACAGGGGAATACTGGAGTGCTTAGTTTGTTACGAGCACATCAAGCATACCGACTACGTCTGGTCCTGTAGCAACTGCTACCACGTATTGCACTTAAAGTGTATTAAAAAGTGGGCCAAGTCGTCACAAAGCGACCACAGTTGGAAATGCCCGGCCTGTCGTTACGTCAGTTTCCTCGTACCCGAGGATTACTTCTGCTTCTGCGGCAAGGCAAAAATGCCGGAATGGAATCGCAGGGACGCGGCGCACTCGTGCGGCGAGATCTGCGGTCGCAATCTGTCCAAGAACTGTACGCATAAATGTACCCTGCTTTGCCACCCTGGCTCTTGTCCACAGTGCGTGGCGATGGTGACGAAATATTGTGGTTGTGGAAGAACCTCGAGGATGTTGCTGTGTAGCACGCACCAATTGCTGTCGTGCGACTCGGTATGCGGGAAAGATCTGTCATGCGGCGAGCACTCTTGTCAAAAAACATGCCATCAGGGAGAGTGCGAACCCTGCGACAAAACTGTGCAACAAATCTGTTTCTGCGGTAACAAGACTCAAGAGGTACCATGTCGGATCAATGTCGCGGATACGTATTCTTGCGACAGTGTTTGTAACAAGCTGTTGGATTGCGGGAAGCATAATTGTCAGAAGATCTGCCATCCGGAGTCCTGCGAGCCGTGCTCGTTAACACCCGAGAGGATCATAACGTGCTGTTGCGGTCAAACGGAGTTAACGGAAAAGAGAGACAGTTGTTTAGACCCGATACCAACTTGCGAGAAAATCTGCTCGAAGAGGCTGAAGTGCGGTCAACCTAGTAATCCGCACATCTGCAAGGCGCCGTGCCACGTGGGCGAGTGCCCGGACTGCGACTTGAGCACCGACGTGAAGTGCCGATGCGGTAACATGGACCGCGAGATCGCCTGCCGGGACCTGACCAGCAAGGCGGACGACGCGCGCTGCGAGAAGCGCTGCAAGAAGAAGAGATCCTGCGGCAAGCACAATTGCAACCAGTTGTGCTGCATCGATATCGAGCACATTTGCCCGTTGCCGTGCTCGAAGACGTTGAACTGCGGCCGGCACAAGTGCCAGGACAGGTGTCACATGGGAAGGTGTCTACCCTGCTGGCAGAGCAGCTTCGACGAGCTGTACTGCGAGTGCGGCGCCGAGGTGATTTATCCGCCGGTAGCGTGCGGTACGAGGAGGCCCGCTTGCTTCCGGCCGTGCTCGCGCCAGCACTCCTGCGATCACGAGGTATTGCACAACTGTCACAGCGAGCCTACGTGTCCACCTTGCAGCGTGCTCACTCAGAGGTGGTGCCACGGTAAACACGAGCTTAGGAAGGCCGTACCGTGCCACGTGAAGGAGATCTCGTGTGGTTTGCCGTGCAACAAGCCTCTCACGTGCGGACGGCACAAGTGCATCACGATGTGCCATGCAGGTGCCTGCGAGAAGCCTGGGCAACAGTGCGTGCAGCCTTGCACCACCACGAGGGAGCTGTGTGGACACATCTGTGCCGCACCGTGCCATGAAGGCAGCTGCCCGGACACGCCGTGCAAAGAAATGGTCAAGGTCACGTGTCAGTGTGGACACAGAACAATGAGTCGCGTTTGCGCCGACAACGCGAGGGAGTATCAAAGAATAGCGAGCAACATACTGGCCAGTAAAATGGCCGATATGCAGCTCGGACATTCCGTCGACTTGGAGGAAGTGTTCGGGCAAGGCGCGAGAAAGCAAAATCAGCTGAAGACCTTGGAATGTAACGATGAGTGCAAGACGATCGAGAGGAACAGGCGACTCGCGTTGGGATTGCAGATCGTCAATCCGGATCTGAGCGGCAAGCTATTGCCCAGATACAGCGATTACATGAAACAATGGGCCAAGAAAGATCCGCACTTCTGCCAGGTGGTGCACGACAAGCTCACGGAATTGGTGCAGCTGGCAAAAACGTCGAAGCAGAAATCGCGAAGTTACTCGTTCGACGTCATGAACAGGGACAAGCGCCATTTCGTGCACGAATCGTGTCAGCATTTCGGCTGTGAGAGTCAGGCGTACGACGAGGAACCGAAGAGAAACGTCGTCGCCACTGCCGTGAAGGATAAGTGTTGGCTACCGAGCTACAGTTTATTGGAAATGGTGCAGCGGGAGAAAGGGCAAAGAAAAGTTCCAGGACCGGTACTCAACACTTCTAAGAGAAATAGTTCCACAAAGACTGTTCTTTCATTACCCGTGAAACAGAATCAGCAATCGTTACCGTCGTCGTCAAGCGCGAAGGCGCCTGAGAAGGAGATAGATTATTTTGATTATCGATAA
Protein Sequence: MATWDGSYAEDPSYLVYSDQSMSDKTTAGNWPHFAGNPAYLPNASATLGRNYYPAAGGGRHLYGQNNGSVSALRNQVAADGVLPSMPSTMVPVRNPYQEHILPSTASVNSPSDGLQYSANSIASTSHSASFFHGNNQKAKYRKRRTTNSKHTLSAEGDSVRSDIVENSKLHATANEFVPNNVKFKRDKFSKWNGRSNAPGNSFNASAQAFRSKSFAMNASLLDNRYKNESYFNNRRDGNYKQRNSQQSMQALPRSSYNDRSYNKFQNGKYHNRKHQSDVSSVGDAHTSTTELGVSAASNSQQTKASIEEFQKDDSSLNTEMSTNREVFTGENNDPDNASLLKVDTQRSRSKRFNTANSLNYSKSDFYDDQSESRYNKTMRYPRRRNEANTSKEKLDNWRDKKENKDTAQGKSLSKKYEIDDDASQRERLMEQLNRGILECLVCYEHIKHTDYVWSCSNCYHVLHLKCIKKWAKSSQSDHSWKCPACRYVSFLVPEDYFCFCGKAKMPEWNRRDAAHSCGEICGRNLSKNCTHKCTLLCHPGSCPQCVAMVTKYCGCGRTSRMLLCSTHQLLSCDSVCGKDLSCGEHSCQKTCHQGECEPCDKTVQQICFCGNKTQEVPCRINVADTYSCDSVCNKLLDCGKHNCQKICHPESCEPCSLTPERIITCCCGQTELTEKRDSCLDPIPTCEKICSKRLKCGQPSNPHICKAPCHVGECPDCDLSTDVKCRCGNMDREIACRDLTSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLNCGRHKCQDRCHMGRCLPCWQSSFDELYCECGAEVIYPPVACGTRRPACFRPCSRQHSCDHEVLHNCHSEPTCPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLTCGRHKCITMCHAGACEKPGQQCVQPCTTTRELCGHICAAPCHEGSCPDTPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGARKQNQLKTLECNDECKTIERNRRLALGLQIVNPDLSGKLLPRYSDYMKQWAKKDPHFCQVVHDKLTELVQLAKTSKQKSRSYSFDVMNRDKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNTSKRNSSTKTVLSLPVKQNQQSLPSSSSAKAPEKEIDYFDYR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -