Obir008123.1
Basic Information
- Insect
- Ooceraea biroi
- Gene Symbol
- gatad1
- Assembly
- GCA_003672135.1
- Location
- NC:12992513-13007579[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.5e-10 4.1e-07 28.8 4.8 1 27 9 33 9 40 0.91
Sequence Information
- Coding Sequence
- ATGCCACTCGGTAATAAACCAGAGTGCACAAAATGTGGGACTCATGAGACCCCGTTGTGGCACTCTACTGAAGCTGGCAATCTCTGTAATGCCTGCTTGGAGGAAGAGCGAAGCGCTGAGGCAAGTGTATCTACGAAGACGGACGAAGAGGATAAGAACAGTTCACTGAGGCCTAGGAGAAGTACCAGGATCACCAGATACTGCAATTCGAAGGCAACTGGACCACACAGAGTGGTGCCCAAGGGCAAGGGCCGCAGGAACTTATTCAAAAAAACACCAGTCAAAGCACCCACGGCCACTGCGACTCCAGTCACGAGTAACTACGTATTTTATAAAGGCACGTACATTCAAGTCGGAGATATAGTCTCCATGCAGGATATCGACGGTGGTATTTATTACGCTCAAATACGCGGCTTGCTAACCGATCAGTATTGCGAAAAGAGCGCTGCCATTACTTGGCTACTCCCCACTACGGCCAGtCCCCCACCAGAAGAAGGCTTTGTTCCTGAGACCTACATAATTGGACCGGAGGAAGATCTACCGCGTAAATTAGAATGCATGGAATTCGTGATGCACGCGCCGTCGGATTATTTCAAGCTGAAGAACACGCCTTATCCGCCTCTGCTCACGGAAAGAGGACTGGGTTACGTGTGGACGACGCTTAGAAACGAAACGGCTTTGTACAAAAAGTGA
- Protein Sequence
- MPLGNKPECTKCGTHETPLWHSTEAGNLCNACLEEERSAEASVSTKTDEEDKNSSLRPRRSTRITRYCNSKATGPHRVVPKGKGRRNLFKKTPVKAPTATATPVTSNYVFYKGTYIQVGDIVSMQDIDGGIYYAQIRGLLTDQYCEKSAAITWLLPTTASPPPEEGFVPETYIIGPEEDLPRKLECMEFVMHAPSDYFKLKNTPYPPLLTERGLGYVWTTLRNETALYKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00770044;
- 90% Identity
- -
- 80% Identity
- -