Obir010727.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ooceraea biroi
Gene Symbol
gata4
Assembly
GCA_003672135.1
Location
NC:1764463-1824619[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.8e-18 1.6e-14 52.6 3.2 1 34 664 696 664 698 0.97
2 2 8.1e-19 1.3e-15 56.0 3.1 1 35 718 751 718 752 0.98

Sequence Information

Coding Sequence
atgaagagaaggaggagtgACGACGACGCGAAACCGGCCGCCAAGTACCGACATCGGGAGTACCTGTTGATCGAGTACGTTGGAGCCATGGAGCCGGCATCGCAGACTGTCCGGGAGCCAGTAATTaagcaggaggaggagggagaggTGATAAAGAACAACGAAGACGTCATCGAGCACGAAGTCGGCCAGCAGCAagagcaacagcagcaacaggcacaacagcaacaacagcagctgCCGTACGTGCCGAACAGCGAGGAGGTCGGCGAGGAGAACGGTGTGGGCGTGCTGGAGGCGGGACAGCCGGAAATGGAAAATGGCGCCATGGTAGAGCCAAGCGGTGTCGAAGCGGTCGCTATTGCGGTCGCCGCTGCCACTGCCGACAATCCCGTCGACCAGGACCCCAATGTTACCTACACCCTCCACGATTTGGGCTACCATCCCGCGCAGATCATTCACGAGAGTTTCGGGGGCGGTGACATGAGGgaggagcagcagcagcagcagcaacaggtCCCGCAGCCGCCCCACCAATCGCACCACCACCATCAGCAGccgccgcagcagcagcaccacCATCAGCAAGCGCAACAGTACGTCCAACTTGGGGCGAGAGAGGTCCCGGTTCCCGAGGGAGGGGATAACCGGCACCCGGCGGAGGCCTCCGTCGCGCCGGAGGGACGCCGCGCCAGCAGTCACATGCCTCACTGCACGATGCATCGGTACGGCACCGAGACGCTCTCACCGACCACGACGGAGCACCATCATCAGTCACAGCAACATCATCACCATCTATCGGAGCTGCATCACGCCGCACTCTCGTCCGCCCACCGTCACCTGGAcgagcaacaacagcagcaacaacagctgCACCATCATCAAGACACTGATGTGGAGGACGTGGATCGTGGCGTGAGCGGCATCACTGCGGCCATGAGGGGCGCCCGGGGTGACTACCTGGGTGTCCTCTTCCCGAATCTCGCGAATCTGTCGAACGGTCCGGCGTCCAGCAATGGTGGCGGCaatcaccatcaccatcatcaccaCGCGTCGCACCACCTGGACGAGGTGTTGTCCGAGGAGCCGTATCTACAGCACCAGATCCGTGGCGGaagtggtggtggcggtgctAGCAGTGCTGGCGCTCCGACAGGCGACGTTTCCCCGACGATGAGGACCGTCGGCGGTTCGCCTAGCTCCAGCCACAGTCCGCACGACGATCAGGCCCTGTCGTCGCCGCACCGTGGCCAGGCTCAGGAGGCCGGCTACAGTCCCACCGATCAGAGCAGATTGCACACGTTCGCGCACCTCACTGCGCTGCAACCGCCACCGTCGGTGCAGACCAGTCACGGGCTCCAAGAGGCCGAGCGAGTGTCCGATCAGCTGTACATGGATTCGATCTACTCGCATCACGCGGCTGCCGGCACTCCGCATCATCATCAGGAGCAGCACGAGCAGGTCGCGTCTGCGCCCCATTCGCCTAGCGGCCCGCTCTCCAGCTCATTGTACCGATCGATGAGTGGCGTGAGCACAATGGGCACCGGGACCGGAGCTGGGGCCGGCTATGCTCTCCCTTACATGAACAGCCCCACGGAGCTAACGTCACCGTCTCAACTTTGGAACACTCAGGTTTCAGGCCTGAGCACCGGACTCCCCATCTCCGAGGATTACAGCAGCAAAGCGTCGAGCACCGTGCCCCATCAGTCTTTGCCAGCGTTCTCACAACCCTTCGGAGCTCGTACGAACTTTCGCGGTTACAGTCCGCCGTACTCGTCGTCCCAGCAGAGCACCGGGGGCACTGTCAGCGCCGAGGCCAGTGGTTCCTGGACGTATGCGTCACCCACGAGTGATCCGCTAACGACGCAATACGGCGCACCGTCGAGGCGGCAAACCGTTAACCCAACGACACCAACGCAGCTAAGCGCCGCGGCAAGTCTGACTGCAATGCATAACATCGAGGCGGAGTACTACACGGAGGGCCGCGAGTGCGTGAACTGTGGCGCGATTTCCACGCCATTGTGGCGAAGAGATGGCACCGGGCATTACTTGTGCAACGCATGCGGTCTCTATCACAAGATGAACGGGATGAATCGGCCTCTGGTGAAACAACCACGCCGCTTGTCTGCCTCGAGGCGCGTCGGTCTCTCTTGCAGCAATTGcgagacgacgatgacgtcgcTTTGGCGTCGCAATTCGGTGGGCGAGCCAGTCTGCAATGCATGTGGTCTGTACTACAAATTGCACGGCGTCAACAGGCCGTCGACTATGAAGAAGGATAGCATTCAAACACGCAAACGGAAACCCAAGGGTGGAATGAAGACCAGCGACACGCCACTCTCCACCAACGTCGCCCAATGTGCgaacaacaataataacaacaacaacagcgtCAAGCTTGAGCCAGATACCTACAGAGACCTAAGGATGGCTCACAGCGGTGGTGTGTCAGTGACGCACGCAGTGACATACGCAAACAGCTTCTTCGACAATGCCCAGTCCTCCAGCAGGATAGTGTCCTACCAGGCGAATCCGACGCTGTACTACGATATGATCACCtcgcagcaacagcagcagcaacagcagcaaccgCACCAGCAACTGTTGGAAAATCATTCGCCAAAGATCGAGTGCCCGTCACCGCCTTGCGCCACGCGATCACCTGGAATGGTCTCGGCCGGACAATCGCCTGATCATCATCAGCTCACCTCGCCGCACATCGTCACGCTGGGCAGTCCGTCGACCAGCCCAACCGGATCGAAGATCATGCTGGACAATGGTCACCTGGAGAGGCCCACGGTTGTCTCTATATCGTCTTAA
Protein Sequence
MKRRRSDDDAKPAAKYRHREYLLIEYVGAMEPASQTVREPVIKQEEEGEVIKNNEDVIEHEVGQQQEQQQQQAQQQQQQLPYVPNSEEVGEENGVGVLEAGQPEMENGAMVEPSGVEAVAIAVAAATADNPVDQDPNVTYTLHDLGYHPAQIIHESFGGGDMREEQQQQQQQVPQPPHQSHHHHQQPPQQQHHHQQAQQYVQLGAREVPVPEGGDNRHPAEASVAPEGRRASSHMPHCTMHRYGTETLSPTTTEHHHQSQQHHHHLSELHHAALSSAHRHLDEQQQQQQQLHHHQDTDVEDVDRGVSGITAAMRGARGDYLGVLFPNLANLSNGPASSNGGGNHHHHHHHASHHLDEVLSEEPYLQHQIRGGSGGGGASSAGAPTGDVSPTMRTVGGSPSSSHSPHDDQALSSPHRGQAQEAGYSPTDQSRLHTFAHLTALQPPPSVQTSHGLQEAERVSDQLYMDSIYSHHAAAGTPHHHQEQHEQVASAPHSPSGPLSSSLYRSMSGVSTMGTGTGAGAGYALPYMNSPTELTSPSQLWNTQVSGLSTGLPISEDYSSKASSTVPHQSLPAFSQPFGARTNFRGYSPPYSSSQQSTGGTVSAEASGSWTYASPTSDPLTTQYGAPSRRQTVNPTTPTQLSAAASLTAMHNIEAEYYTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCETTMTSLWRRNSVGEPVCNACGLYYKLHGVNRPSTMKKDSIQTRKRKPKGGMKTSDTPLSTNVAQCANNNNNNNNSVKLEPDTYRDLRMAHSGGVSVTHAVTYANSFFDNAQSSSRIVSYQANPTLYYDMITSQQQQQQQQQPHQQLLENHSPKIECPSPPCATRSPGMVSAGQSPDHHQLTSPHIVTLGSPSTSPTGSKIMLDNGHLERPTVVSISS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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