Obir009883.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Ooceraea biroi
Gene Symbol
ZFX
Assembly
GCA_003672135.1
Location
NC:9776049-9834244[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 46 1.9e-05 0.0014 18.4 1.1 2 23 319 340 318 340 0.96
2 46 3.2 2.3e+02 1.9 1.0 2 23 370 392 369 392 0.88
3 46 0.13 9.5 6.3 1.4 1 23 412 435 412 435 0.89
4 46 9.3e-06 0.00067 19.4 0.8 1 23 441 464 441 464 0.97
5 46 0.0015 0.11 12.4 5.6 2 23 470 492 469 492 0.95
6 46 0.00061 0.044 13.6 0.9 1 23 497 520 497 520 0.97
7 46 5e-07 3.6e-05 23.4 0.5 2 23 527 548 526 548 0.97
8 46 1.2e-05 0.00085 19.0 0.9 1 23 554 576 554 576 0.97
9 46 0.0012 0.085 12.7 0.5 3 23 584 604 582 604 0.96
10 46 0.017 1.2 9.1 0.2 2 23 820 842 819 842 0.91
11 46 0.69 50 4.0 0.4 1 23 854 877 854 877 0.95
12 46 0.081 5.8 7.0 3.5 1 23 890 913 890 913 0.93
13 46 6.9e-05 0.005 16.6 4.8 1 23 919 941 919 942 0.95
14 46 0.084 6 6.9 0.6 2 23 948 970 947 970 0.95
15 46 0.0014 0.1 12.5 1.5 1 23 975 998 975 998 0.98
16 46 1.2e-06 9e-05 22.1 0.5 2 23 1005 1026 1004 1026 0.96
17 46 1.2e-05 0.00089 19.0 1.7 1 23 1032 1054 1032 1054 0.97
18 46 6.6e-05 0.0048 16.7 1.1 1 23 1060 1082 1060 1082 0.98
19 46 0.00016 0.011 15.5 2.2 2 23 1193 1214 1192 1214 0.97
20 46 0.00026 0.018 14.8 1.5 1 23 1216 1239 1216 1239 0.96
21 46 0.002 0.14 12.0 1.5 1 23 1244 1267 1244 1267 0.97
22 46 0.00045 0.032 14.1 2.1 1 23 1273 1296 1273 1296 0.95
23 46 0.0024 0.17 11.8 2.0 2 23 1303 1325 1302 1325 0.95
24 46 0.0087 0.63 10.0 0.3 1 23 1330 1352 1330 1352 0.96
25 46 0.0014 0.098 12.5 0.5 3 23 1360 1379 1359 1379 0.98
26 46 1.2e-05 0.00089 19.0 0.1 1 23 1385 1407 1385 1407 0.97
27 46 0.0019 0.14 12.1 0.4 1 23 1413 1435 1413 1435 0.97
28 46 1.1e-05 0.00079 19.1 0.6 2 23 1535 1556 1534 1556 0.96
29 46 0.066 4.8 7.2 3.5 1 23 1558 1581 1558 1581 0.96
30 46 0.15 11 6.1 3.5 1 23 1586 1609 1586 1609 0.95
31 46 0.00059 0.043 13.7 2.1 1 23 1615 1638 1615 1638 0.96
32 46 0.033 2.4 8.2 0.8 3 23 1646 1667 1644 1667 0.95
33 46 0.00034 0.024 14.4 0.2 1 23 1672 1694 1672 1694 0.97
34 46 1.2e-05 0.00084 19.0 0.1 2 23 1701 1722 1700 1722 0.97
35 46 8.8e-06 0.00064 19.4 0.1 1 23 1728 1750 1728 1750 0.98
36 46 0.0011 0.08 12.8 0.8 1 23 1756 1778 1756 1778 0.97
37 46 0.026 1.8 8.5 5.3 1 23 1813 1836 1813 1836 0.96
38 46 2.3e-05 0.0017 18.1 0.7 1 23 1842 1864 1842 1864 0.97
39 46 0.01 0.75 9.8 4.4 1 23 1870 1892 1870 1892 0.98
40 46 0.0015 0.11 12.4 1.8 1 23 1898 1920 1898 1920 0.97
41 46 0.13 9.7 6.3 7.8 1 23 1926 1948 1926 1949 0.96
42 46 0.00024 0.017 14.9 3.4 1 23 1964 1987 1964 1987 0.96
43 46 0.057 4.1 7.4 0.6 3 23 1999 2019 1997 2019 0.95
44 46 6.5e-07 4.7e-05 23.0 0.9 1 23 2025 2047 2025 2047 0.99
45 46 2.5e-05 0.0018 18.0 1.9 1 23 2053 2075 2053 2075 0.97
46 46 5.2e-07 3.8e-05 23.3 0.5 1 23 2081 2103 2081 2103 0.99

Sequence Information

Coding Sequence
ATGTCCTCCCTCGACTATCTCGACTTGTGTCGATTGTGTCTCGTGAAGGACCGCGTCTCCGTGCCGATTTTCGAAGGCGAGGGCGACGTACGGCAGATTTATTTCAAGATCGCAGCCTGCCTGCCGGTCAAGGTTGCTAGGGAAGACAAATTACCTAAAAAGTTATGCAACGACTGTGTGTATAAAGTAGAATTATGTTATCAATTTTGGAATACGACGGCGAATGCGGAGAAGCAGTTGCTGCAATGGCTCGGCGAGGTGAATATGGAAGACAAGCAGGGTTATGTCGGCGCTGTTCACAATCCgAACGACATGAAACCAGAACAGAGCAACGAGAACAGGTTAGATGGTACTGTGATGCAACAAGTAAGCGAACATCAGAATACCACCATGAATATTGGCATGATGGACAATATGGGTATGGGTATGCCGATGATGATGAGCAATGCTCAGCAACAAATAACCTCAGTTCCTATGGACAACAGTGGTAGCTCCGTACAGAATGTCCAGCCAGTTGCTGGACCGAGTACGCAAACGACACATGACCAAATTGCACAGAATCAAACGGACGCGCCTACGCAACAGGAGGATGAAGAGGAAAGTAGTGAAGAGGAGGACAACTCGGACGACGAGTGCGAGGGAGATGAAGGCCTACCTATAAAAGAAGAGGGTGAAGAGGACCCTAACAATAGCAGAACTATTGAGCCTACTACCTTTGTAAATGTTTCCTTGGCGTGCGACGAAGCAGGACCTTCCGGGCTTCAGCAAAAAATTGCTGACATGCCAGAGATGGTGATGCCGCAGGCAGCAGACGTGGATCCGAAAACTGGGAGGCCAGCGGTGAGCGTTCTCATTGACGCAGTAACGAAAGAAGAAACTCGTGGGAAAGCACCCATCGCTGAATGCAAGCAAGAAAGAAAGTTCCAAGAAAAGGATCATATACGTATTTCGCTCGTCTGCGACGCTTGTCCTAAACGCTTCAAGAACAGGTATTTGCTGAAGCGGCACAGACTCACGCACACGGAAATTGAGCCGCGAACGGTGGAACTGAGCGTGAAGAAGAGCACCACGTTCACCGATACGGTGCCGCGGAATCAGGAGGCGCTCTCATGTGTGGCATGTGACTTTCGATGCAACAAGAGATCCACGATGATCGCGCATCTGGCTGAGAAGCACGAGGGAGGCACCGTGGACGATGATAACTGTGCTGCGAGCGGCAAGCGCAAGCAAGAGTTCACGTGCATTGTCTGCGGCCTGGTGTGCGCCCGCAAGGAAACCCTGCGCTCGCACTTTGTGCGCAAACACACGCAGCACTATGACTATTCGTGCGAGTACTGCGGCAAGGAGTTCAAGATCAAGGGTGACCTTACCACGCACACTAGGCTCAATCATCGGGAGTCTCCGGTGATGTGCGACGTGTGCGGCAAGACGTGCCGCAACAGTCACAGCCTGTACACGCATCAGAAGCACGCGCACTATAAGGCGAAGTACGAGTGTCCGCGGTGCCACCGACGGCTCGTCACGCAGGAGAATCTGGACCAGCATGTGCTGACGCAGcacgagagaaaggagaaatcAGTGTGCGAGGAGTGTGGCAAGACCTTCTTCGAGAACTATGACCTAAGGAAGCACATGAGGATCCACACCGGCGATAAGCCATACGATTGTAAGGTGTGCGGTAGAGCGTTCGCCAGGCACAGCAGTCTCAGCCAGCATCTCCTTCTGCACACCGGTGAACGTATCTATGGATGCGACGTGTGCGGCAAGTCCTTCGCGCAGAAGGCTGGCCTGATTTGCCACCGGAAGATCCATTCGGGTGCATACAATTCTCGTGGTATTTTCATCTTTGATAAAGAATCCGTGGTAATGAAGAAATGGCAGATTATGGAATTAAATGGCAGATCATATTACGCGTTTGTGCCTGAAGATGATACGTCTTTGTTGGACGAAAGCTTATCAGGTCACCTGGAGGAGCAAATGGAGGAGCGACTGGAAGAAGATTTGGAGGAGCCAGTAGAAGAGGAGCATTTAGAGGAAATGAAGGAGGACGATGTAACCGAAATGAAGGAGGAACTATTTGAAGAGGAGGGTTCGCAGTATGATTCTATGGAGGAAAGACTGTATGAGGACGATGAGGACGAGAACATCTTTAACGGCAATTTCGAGGAGCAGGACGAAACAGATGAGAAACCGATTACCCTCAATGGAATCAGCGAAGCGACAGACGACAAGGCTGTATCAGGTGATCTGTACCAGGTGAAGGTACAGGGCAGCATGGTGACGATCGAAAAGCTCTCGTCTGCGGAGTTGGATGTGAAGACGAATGAGTACCAGACGGAGGACGCGTACAATGATGATGAGGGAGAGATCGAGTACCTTGAGGAAGAAATGTTAGACTCTCCCAGCGATAACGTGGTGGTGACGAAAGCGCCTGTGAAGAATCCAAGCGGAGTCTTGAAGTGTAGAGTATGCTCGGAAGTATTCGATTCATCTATAGCCTTTAGGAAACACGTAGCGTGGACGCACAAAAAGAAAGTGTGTATCAAGGAGGACGGTGCCTACATATGCGCCGTGTGCGATTACAGAACTCTGAAGAAGAGTTCGTTTGCCGTGCATCTGGAGAGGAAACATGAGACTTGGTCCAGGAAACGGTCTAGCAATACGATGTTCCCGTGTGCGGCTTGCGGATTCGTTTGCCGGTCGAAACATTCGTTGCAGTCGCATTTCATCAGGAAGCACACAGACCGATACGAGCACCAATGTGACTTCTGCCCAAAGAAATTCAAGGTCAAGGGTGACCTGACAAATCACATACGATTCCACCACAAGGAGAAACCCGTTAAATGCAACGTGTGCGGCAAACTATGCCTGAACAGCGGCTCACTATACGTACACCAGAAATGGGCGCATTACAAACCGAAGTACGAGTGTCATATCTGCAAGAGACGCATGGTCACGCAGGAGAACCTGGATCAACATCTACTGACGCAGCACGAGAAGCATGAGAAGATAGTCTGCGCCGAGTGCGGTAAGACATTCACGAAGAAGGATTCCTTCAAGAGGCACATGGTAGTCCACACGGGATGCAAGCCACACTCTTGTATGATCTGCAAGAAGCCCTTCGCCAGACGATCGCAGCTGCGCCAACATTTGCTAATCCACACCGGCAAGCGACCATTCGAGTGCGACATTTGCGGCAAGGCGTTCACGCAGAAGCCAGGCTTGATCTGCCACAGAAAGACTCATCCTGGTCCTCATCCACCGTTACCCGTTATGCCGATCGCAGACATCGTAAAAGAATTCACTGACGGATACTTACAGGAGATAAACGCGCGAAATAAAGAGGATAATATTGAAGATATTGAAGAAGCAGTTGCAGATCCGTTGAAAGTCGAATTCAGTGTCGTTCAGAAATCATTCGCCAAAAACGAATGCGAACGGACGAGAAGGAAGAAACTGTCGATGGATCACGAGGAACGAATAATGGGACAGATAAACGCAGACTTAACGGCCAGGGAATCCAATCCGCGACTTGCCGAAGGGAATCGggcgacgaggaggaaagcgATGTGCGTGGAATGCGATCATTGTCGCCGCAAGTTCCCGAAGAAGAGCAATCTCGTGGAGCACCTGAAGCAACACAGGCACAAGTGCACCGACTGCCCGAGGACTTTCAGCTTACGGCGTTACCTGGCTGCCCACGTCGAGAAGAATCACCGGCAGCAAGTGTACGAGTGCAGCGTGTGCAAGTACAAGAGCAACAACAAGGGTACCCTGAAGAACCACTATATCCGACTGCATACGAGCAACTACGACTACGCATGTGACACCTGCGGCAAACAGTTCAAGATCAAGAAGGCCCTGAATCATCACGTGAAGCAGAACCACAGCGGCGCGCCGCCGATAGTGTGCGACGTGTGCGGCCACTTCAGCAAGAACCTCCATGCGCTGAAGGCGCACATGAAGTACAGGCACTACAAGCCAGAGTTCGTCTGTCGGATATGCCGGCGGGGTATGACCACGCAGGAGAATCTGGAGCAGCATCTCACGTGGCACGAGACCAGGGAGAAGGTGCTCTGTCCTACCTGCGGCAAGAGATTTCGCGGACGCGATCTCGACTCGCACATGAGAGTGCATACTGGGGTAAAGCCGTTCCCGTGTCCCGTATGCGGCAAAACGTTCCGACGACAAACGGCTCAGGAGCAACACGTGCTGATCCACACCGGCAAGAGACCTTATATCTGCGATATCTGCGGCCAGGCGTTCGCCCAGAAACCCGGTTTGATCTGCCACAGGAAGAGACATCCGGGTCCGCTGCCTCCGTTACCAGTGGTCTCCATCAAGAACATTGTCACGGAATTTACGAGAGAtGACTCATCTGTGGATCCTCTGAACGTCGTGGATACCAGTAATTCAGAACACTCGCTGATTGAGAGTATAGAATGCACACCCGAGTACAACTCGTTACCGAATAGAATCAAACGACACATTGTGAAGAAAAGAAACCTATCGAAGCAGGAGAATCATTGTACGAAGAAAGACACCAGAAAGCAGAGATTCAATCAGACCAGAGTTGAGAGGAGAAAATCGGAGCTCATGTTGGAATGCGCTACGTGCGGGAAGCGTTTTAGCCAGAAGGCTACCATGATAAAGCACATGAACCAGCACAAGTATCAGTGCCAAAGCTGCTGCCAGAGTTTTAGTCTGAAGCGGGATCTGAAACGCCACGTTGAGAAGGCCCACGGACCTCTGCTTTATCCTTGCAGCATCTGCGAGTACAAGAGCAACAACAAATGCACCCTGAAGGACCACTTCATACGGAAGCACACCAGCGGCTTTCAGTATTCCTGCACGGTCTGCAAGAAGCAGTTCAAGATCAAGAACGACCTGAAGCAGCACACGAATCAGGTGCACAGCGGCGAACCACCCATCATTTGTAGTATCTGCGGCCACGCCTGCAAGAACGTGCCCGCCATAAAGGCGCACATGAAGTACCGTCACTACAAGCCGGCCTACGAGTGCAAAATATGCAAGCGTGGTCTGACCACGCAGGAAAATCTCGACCAGCATCTAATCTGGCATGAACGCAAGGAGAAGGTCGTCTGTCCCACTTGCGGCAAGACCTTCGGTCAAAAGCGGGACCTGGACCTTCATCTGAGAATCCATCAGGGTATCCGGCCATTCTCCTGTCCGGTCTGCGGCAAGACCTTCCCGCGGAAGACCGCGCAGGAGCAACACATATTGATTCACACCGGCAAGAGGCCGTACATCTGCGACATATGTGGGCAAACCTTTGCACAAAAACCTGGTCTCATCTGTCACAGGAAGAGGCATCCTGGTCCATTGCCGCCGTTACCTGTAGTATCCATTAAGAAGATAATCATGGACTTTACTTCTCCTTATTCCAGGCAACGAAGAGGCAAGTCGCGCACGGAGCACCAATGCGTGATGTGCGGGGCCTGCTTCCGTCATACGCGAAAGCTCGTGGAGCACTTGAAGAACTTGCACAACATCGACCGAGCCTTCAGCTGCAATGAGTGCAACAAGACCTTCCGCAGCCCGATGAACATAGCTCGCCACAAGCTGATCCATACGGGGCTGAAGATGTTCACCTGCGATCTCTGCGAGTACAGCACCAACCAGAAGTCCAATCTGGAGTGCCATCGTCGTCGACACGCGAAAGATTATAGCTTCAAGTGCGAAACGTGCGGCAAGGGCTTCTTCCACAAGATTGAGTACCTCGAGCATCAGAGCGCGCACACGAGCAAGAATCTCTATCGTTGCGAGCACTGCCGCAAGTGTTATCTGTACAAGAAGAATCTGTCGGTGCACCTGATGGCACACCACGCGGACCAGCAGACCAGCAGCGCGAGGCACGCGAAGACCAAGCACGTGTGCAGTTTCTGCCCGGAGAGATTCGTGTACAAGCGACTGCTGAAGAAGCACATGAAGAATCAGCATGGATTCGCGGACAAGGCCCCGACGAAGCACCTGTGCGACCTGTGCGGCGCGGTACTGTCCTCCAAGAGACGATTACTGGCGCATAAGCGTGGCCACGCGGGCGAGAAGATCTTCAAGTGCGACGTGTGCAACAAGGCGTTCATCAGCAAGGAAAATCTGAGCGTTCACAAGCGCACGCACACAGGCGAGAAGCCGCACGTGTGCCCACAGTGCGACAGGAACTTCACGCAGAGGACGTCGCTGGTCCTGCACTTGCGATATCACTCGGGCCAGAGACCTTATCAGTGTCCAGATTGCGGCAAAGGTTTCGTGTCCAATACTCTGATGAAGAGACACCGCAAGGTGCACGAGAAAACCATGCTGCAAAAAACGTGA
Protein Sequence
MSSLDYLDLCRLCLVKDRVSVPIFEGEGDVRQIYFKIAACLPVKVAREDKLPKKLCNDCVYKVELCYQFWNTTANAEKQLLQWLGEVNMEDKQGYVGAVHNPNDMKPEQSNENRLDGTVMQQVSEHQNTTMNIGMMDNMGMGMPMMMSNAQQQITSVPMDNSGSSVQNVQPVAGPSTQTTHDQIAQNQTDAPTQQEDEEESSEEEDNSDDECEGDEGLPIKEEGEEDPNNSRTIEPTTFVNVSLACDEAGPSGLQQKIADMPEMVMPQAADVDPKTGRPAVSVLIDAVTKEETRGKAPIAECKQERKFQEKDHIRISLVCDACPKRFKNRYLLKRHRLTHTEIEPRTVELSVKKSTTFTDTVPRNQEALSCVACDFRCNKRSTMIAHLAEKHEGGTVDDDNCAASGKRKQEFTCIVCGLVCARKETLRSHFVRKHTQHYDYSCEYCGKEFKIKGDLTTHTRLNHRESPVMCDVCGKTCRNSHSLYTHQKHAHYKAKYECPRCHRRLVTQENLDQHVLTQHERKEKSVCEECGKTFFENYDLRKHMRIHTGDKPYDCKVCGRAFARHSSLSQHLLLHTGERIYGCDVCGKSFAQKAGLICHRKIHSGAYNSRGIFIFDKESVVMKKWQIMELNGRSYYAFVPEDDTSLLDESLSGHLEEQMEERLEEDLEEPVEEEHLEEMKEDDVTEMKEELFEEEGSQYDSMEERLYEDDEDENIFNGNFEEQDETDEKPITLNGISEATDDKAVSGDLYQVKVQGSMVTIEKLSSAELDVKTNEYQTEDAYNDDEGEIEYLEEEMLDSPSDNVVVTKAPVKNPSGVLKCRVCSEVFDSSIAFRKHVAWTHKKKVCIKEDGAYICAVCDYRTLKKSSFAVHLERKHETWSRKRSSNTMFPCAACGFVCRSKHSLQSHFIRKHTDRYEHQCDFCPKKFKVKGDLTNHIRFHHKEKPVKCNVCGKLCLNSGSLYVHQKWAHYKPKYECHICKRRMVTQENLDQHLLTQHEKHEKIVCAECGKTFTKKDSFKRHMVVHTGCKPHSCMICKKPFARRSQLRQHLLIHTGKRPFECDICGKAFTQKPGLICHRKTHPGPHPPLPVMPIADIVKEFTDGYLQEINARNKEDNIEDIEEAVADPLKVEFSVVQKSFAKNECERTRRKKLSMDHEERIMGQINADLTARESNPRLAEGNRATRRKAMCVECDHCRRKFPKKSNLVEHLKQHRHKCTDCPRTFSLRRYLAAHVEKNHRQQVYECSVCKYKSNNKGTLKNHYIRLHTSNYDYACDTCGKQFKIKKALNHHVKQNHSGAPPIVCDVCGHFSKNLHALKAHMKYRHYKPEFVCRICRRGMTTQENLEQHLTWHETREKVLCPTCGKRFRGRDLDSHMRVHTGVKPFPCPVCGKTFRRQTAQEQHVLIHTGKRPYICDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKNIVTEFTRDDSSVDPLNVVDTSNSEHSLIESIECTPEYNSLPNRIKRHIVKKRNLSKQENHCTKKDTRKQRFNQTRVERRKSELMLECATCGKRFSQKATMIKHMNQHKYQCQSCCQSFSLKRDLKRHVEKAHGPLLYPCSICEYKSNNKCTLKDHFIRKHTSGFQYSCTVCKKQFKIKNDLKQHTNQVHSGEPPIICSICGHACKNVPAIKAHMKYRHYKPAYECKICKRGLTTQENLDQHLIWHERKEKVVCPTCGKTFGQKRDLDLHLRIHQGIRPFSCPVCGKTFPRKTAQEQHILIHTGKRPYICDICGQTFAQKPGLICHRKRHPGPLPPLPVVSIKKIIMDFTSPYSRQRRGKSRTEHQCVMCGACFRHTRKLVEHLKNLHNIDRAFSCNECNKTFRSPMNIARHKLIHTGLKMFTCDLCEYSTNQKSNLECHRRRHAKDYSFKCETCGKGFFHKIEYLEHQSAHTSKNLYRCEHCRKCYLYKKNLSVHLMAHHADQQTSSARHAKTKHVCSFCPERFVYKRLLKKHMKNQHGFADKAPTKHLCDLCGAVLSSKRRLLAHKRGHAGEKIFKCDVCNKAFISKENLSVHKRTHTGEKPHVCPQCDRNFTQRTSLVLHLRYHSGQRPYQCPDCGKGFVSNTLMKRHRKVHEKTMLQKT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-