Obir008359.1
Basic Information
- Insect
- Ooceraea biroi
- Gene Symbol
- bab2
- Assembly
- GCA_003672135.1
- Location
- NC:3847541-3858318[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-13 1.2e-10 40.2 0.0 1 45 354 398 354 398 0.96
Sequence Information
- Coding Sequence
- ATGGAAACTACCTCGTCTCAACAATACCGCCTTCGCTGGAATAATCACCGTACGAATCTCCTGAATGTCTTTGAAGAACTCCTGCAAAACGAAGAGTTCACTGATGTGACTCTCGCCGTGGAGAACAATCTCATCATCAGATGCCACAAGATCGTCTTGGCCGCGTGTTCTTCCTACTTCCAGAGACTGTTTCTCGAGTTGCCATGCAAGCACCCGGTAGTCGTGCTCAAGGATGTCAAATACTCCGAAATAAAAGCTATTTTGGAATACATGTACCGCGGCGAGGTGAACGTCGCTCAGGAGCAATTGACCGGTATGCTAAAGGTCGCGGAAGCGTTAAAGGTGAAGGGCCTAATAGACGAGAACGGCGGTGAAGGCTCAGTGCACGACGATTCCCGTCGCGAGGATAGGCACGTGGAAACCTCGATGTCACCACCACCGGCTATTAGCACCAGCACTGGTACTAGTACTACGGTAGCGCACAGCAGTGCTCATGACGCATCACCGCCGCATTCGACTGATGGCGCCTATGGTTCCTACGCCAAGTCCGCGATCGATCACGGTCACAATCGTCTCGCCTTATCAATGTGGGGGTTACCAATGCACCATGCAGCTCACCAATCTTCGCCACATTCTTCTTCCGTCGCCGCTGTCCTCGGCACTAGCTCGTACGACAACGGCTTTGAGAACGTGCCGTTCAAGCGCAGAAAGTTGCTTCATTCCAACTTGCTGATGAATCGCGACACGCCGATACTGCGCACAGTGCTTGGCCAGGGCCACGCTGACAGTTCGCAGAGCATATCCACCTTGCCACCGCCTGACGGTCACGAAGCAGTCAACTTCCGTACGAGCAGCAATGGTTCTGCCAACGATAACGATAACCGTCGCAGCAGCAGTGATCTTGCACACGGCGAGGTGGCCCACAGCCCTTATACGGACGTCTCCTTCATGGACGAAGATGAGAAACAACCATCGCCGCAGTCGTATCCTGGTGATAGTAAATCAGGCATCGCGAACTACGTCCCGCAGAAACCCGAGTGGAAACGATATAAGCAGTACACCCGGGATGACATTATGTCTGCGATTGAGGCGGTGAAAGGTGGCATGAGTGCTGTACAGGCAGCGCGTAAACACGGTGTACCGTCGCGCACGCTTTATGACAAGGTGAAGAAGCTCGGCATCACAACATCACGGCCATTTAAACGTTCCGCGTCCAACGGCAGCAGCGGTGCTTGCTTCCCGTATGGTATTGGCGGCAACGTGAATGGCGGAATTTACAGCGGTGCCCTGTCCGAAAACGAGAGCAGTAACGTCAACATCGCGGAAAGTACGGCTAGCAGGGGCTCCGCCGCGCTCGAAACCACCTACGCTAAGGCGAAGGATGTTCCACCAGATCGCGATTCAGTATCGGACTCGATGGCACCCTGCAGTCCTAGTCCGGTCATGCGTTGTGCTAAGCAAAAACAACAGCAAGAAAGCATGGACGATCAGGTTGAGGATCTTTCGGTGAGTCGTAAGTCCGATGTTCCAGTGATAGTTCCGCCGTCTACTGCGCCAGATGCGATTAAGGTCGAAGCGCAGGACGTTGGGCCAGATAACAGCGACTGTTGCGACTACAATTAA
- Protein Sequence
- METTSSQQYRLRWNNHRTNLLNVFEELLQNEEFTDVTLAVENNLIIRCHKIVLAACSSYFQRLFLELPCKHPVVVLKDVKYSEIKAILEYMYRGEVNVAQEQLTGMLKVAEALKVKGLIDENGGEGSVHDDSRREDRHVETSMSPPPAISTSTGTSTTVAHSSAHDASPPHSTDGAYGSYAKSAIDHGHNRLALSMWGLPMHHAAHQSSPHSSSVAAVLGTSSYDNGFENVPFKRRKLLHSNLLMNRDTPILRTVLGQGHADSSQSISTLPPPDGHEAVNFRTSSNGSANDNDNRRSSSDLAHGEVAHSPYTDVSFMDEDEKQPSPQSYPGDSKSGIANYVPQKPEWKRYKQYTRDDIMSAIEAVKGGMSAVQAARKHGVPSRTLYDKVKKLGITTSRPFKRSASNGSSGACFPYGIGGNVNGGIYSGALSENESSNVNIAESTASRGSAALETTYAKAKDVPPDRDSVSDSMAPCSPSPVMRCAKQKQQQESMDDQVEDLSVSRKSDVPVIVPPSTAPDAIKVEAQDVGPDNSDCCDYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01099330;
- 90% Identity
- iTF_01099330;
- 80% Identity
- iTF_01099330;