Basic Information

Insect: Onthophagus taurus
Gene Symbol: Rreb1
Assembly: GCA_000648695.2
Location: NW:121636-150850[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.93 71 3.8 5.0 1 21 89 109 89 111 0.95

2 16 6.5e-05 0.0049 16.9 0.5 1 23 124 146 124 146 0.97

3 16 2.4e-06 0.00018 21.4 2.6 1 23 152 174 152 174 0.98

4 16 0.086 6.6 7.1 0.1 1 23 267 291 267 291 0.91

5 16 0.02 1.5 9.1 0.2 2 23 297 319 297 319 0.97

6 16 0.065 5 7.4 0.6 1 20 367 386 367 388 0.91

7 16 0.0071 0.54 10.5 0.2 1 23 498 520 498 520 0.98

8 16 6.7e-06 0.00051 20.0 0.6 1 23 529 551 529 551 0.98

9 16 0.0011 0.083 13.0 3.6 1 23 557 580 557 580 0.97

10 16 0.00051 0.039 14.1 2.1 1 23 924 947 924 947 0.95

11 16 0.00012 0.0088 16.1 0.4 2 23 1176 1197 1175 1197 0.97

12 16 0.078 5.9 7.2 6.3 1 23 1203 1226 1203 1226 0.97

13 16 0.0015 0.11 12.6 2.4 1 23 1256 1280 1256 1280 0.94

14 16 0.45 34 4.8 3.7 1 23 1326 1349 1326 1349 0.93

15 16 0.01 0.78 10.0 0.4 3 23 1404 1424 1402 1424 0.93

16 16 0.0046 0.35 11.1 5.9 1 23 1430 1452 1430 1452 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.93	71	3.8	5.0	1	21	89	109	89	111	0.95
2	16	6.5e-05	0.0049	16.9	0.5	1	23	124	146	124	146	0.97
3	16	2.4e-06	0.00018	21.4	2.6	1	23	152	174	152	174	0.98
4	16	0.086	6.6	7.1	0.1	1	23	267	291	267	291	0.91
5	16	0.02	1.5	9.1	0.2	2	23	297	319	297	319	0.97
6	16	0.065	5	7.4	0.6	1	20	367	386	367	388	0.91
7	16	0.0071	0.54	10.5	0.2	1	23	498	520	498	520	0.98
8	16	6.7e-06	0.00051	20.0	0.6	1	23	529	551	529	551	0.98
9	16	0.0011	0.083	13.0	3.6	1	23	557	580	557	580	0.97
10	16	0.00051	0.039	14.1	2.1	1	23	924	947	924	947	0.95
11	16	0.00012	0.0088	16.1	0.4	2	23	1176	1197	1175	1197	0.97
12	16	0.078	5.9	7.2	6.3	1	23	1203	1226	1203	1226	0.97
13	16	0.0015	0.11	12.6	2.4	1	23	1256	1280	1256	1280	0.94
14	16	0.45	34	4.8	3.7	1	23	1326	1349	1326	1349	0.93
15	16	0.01	0.78	10.0	0.4	3	23	1404	1424	1402	1424	0.93
16	16	0.0046	0.35	11.1	5.9	1	23	1430	1452	1430	1452	0.98

Sequence Information

Coding Sequence: ATGCAAGGCAACGTTTGTATGCCTCAAGATCTGGAAACTGGGTCGTCGCCGCCACCACAGAACAATTCAGatatcaaTGAGAGCGGAATGGACTTAAGCATGAACGAACCAAAGATAAAAGCAGCCAAAGAGCTGATACAAAATCACCAAAGCATTATCAACGACTCCGGATTTATATCCTCGAGCAACACAACCCATCATACAGATAATAACCAAAGCGATTCGGATAATCGAAGCGATTGTAGCAGTTCGCCAGAAAAAACTTATTGTTGCCCGATTTGTAACAACATGTTAACCGGCCAACACGAATTTACCCTCCATATAAGATGTCATAACGAATCAGCAACAACCAACGAGAAAGGAGCTGGGTATATTTGTCGAATTTGCGGCAAAGTTTTGTGTTCAAGTTCAAGTTTAGATCGACACGTTTTAATACATAGCGGGGAACGACCATTTTCATGCAACATTTGTGGCGATACATTTACTACAAATGGAAATATGCATCGGCATATGAGAACACATTCGATTAAAAACGATTATGAATCGGATAGTGGTGGAAGTAGTGATGGAAGAAGCGATACAAGAAGTGAAACAAGAAGTGAGACAAGAAGTGAGACGAGAAGTGAGACAAGGAGTGAAACTAGGAGTGAGGCAAGGAGTGAAACGAGAAGTGAGGCAAGAAATTCTTGTATTAAagagtttaataataatcaaattgaaaaaggTTTTAAACGAAAGCTCGAAGATAtggatgaatttaaaaatgcaagAATCAAAATTGAGTTAGATGATGAGCAATTTAAATGTCCTGTTTGTGAAAGAGAAGATTTTAATTcgattgaaaatttaaagatacATTTAATAGATAACCATCCAGATCATCCTGCTGAATGTGATTTATGCAAAGCGAATTTCCCCAATATAAAAGCGTTAAACTTACATCGAAACACAGTTCACGCCGATCAAAACGGAAAAAAATCCTCAATTATAGGATTTAGGGAtttaacagataccgatttTTCGAGCGAAAAGTTTCCTCACATTGCTAAATATCGTTGTGAAGAGTTCCTGCATAAATCGTCATCGAGCGATGTTAAATAtcaatgtcaaaaatgtcCGAGGGCTTTCCCATGCGCAACTTCGTTACAGTTACATGAAAAAGATTGCGCTGCGACCGGAATTAATTTTCCCATTCCAAAAATGGATCCTTCCTTAGTCAGAAAAaccgaattttttaatacgcTAGACCTCCAAGATAACTCCCCAgaaaaaatccataaaaaaatccttgataacgtcaaatttgataaCACCAAAGACCTTGCTGATATTCAAAGCATCATTTCAATGACAGCTAATGGAAGCTTTCTGCAACACTTAACAAAAACCGATTCGCTCCCCCAAGATAACCTGCAATCAGAAAAAactgaagaagaagaagccCAAGATTTATTCGCGATCGAATTCAGAAAGATGAAATTGCGCGGGGAGTTCCCCTGCAGGTTATGCACCGCGGTTTTTCCGAATTTGCGAGCTTTAAAGGGCCATAATCGAACCCATTTAAACGGAAATAACAACGGAACTTATCATTGCAATATGTGCCCTTACTCCTCACCCGATAAAGCAGCTTTAATCCGACACATGAGGACTCACAACGGAGATAGACCATACGAATGCTCTTTATGCAAATACGCCTTCACCACCAAAGCTAATTGCGAGCGGCATTTGCGAAATCGCCACGCTAAATCAACAAGGGAAGAagttaaaaatgcaataatttaTCACCCCTCCGAAGACCCAACAAACGacgaattaaataaattggcgAAAGAcgacaaaaaattaaacgtttacGGAGATGAAATCGAAAAGAGTTCGCCTAAAACACCATTGAATGAGCCATATCCAAGAAGGGAGATGAATCAATTTCCGTGGGGGAACCAAAACGTTCCAAAAACCCCTCCTAAACCATCTTATAGCATccaagaaatcataaaaaatttaagcgAAAATAAATCTCCGATGATTCCGTTAAATTATTCAACACCCCCATTGATAACTCCCCCTAACTCAATGCATACATCAACCCCGCAAAAACCAAAGAtccatgtaaaaaatttagagGCCCTCCAACACATCGATTATGAATCCGACGACCATATCGACAAACCAATCGATTTAagcacaaaaaaatcaatctcAATGGAAAGCATCAACAACGACGACGATAAATCAGAAGATGATGACTCGGATCATCGCGAAACCCCGGAAGATTTAACCAATAAAACCCCCCCAATGATGCGCTTCAACAACATGTTCCCCCAATTGCTTCAAAATAGCCCCAACCCCAACCTATACACCCAATTAGCTTTGATGAACATCTCAAACATCCCCCCATGGGGGGCATTTTCCCCATTATTCCTCCAAGCGATTCAAAACCCTTTATTACAACAAGAACAAGAAAGACTCAAAAGGCAATTAAGCGGGGGTTCCGTCGTTAACATGACAAACAAAGAAGTATTCCCAATCCCCCAATACCCCCATCAATACTCCCATCAACCCCCACTAATAAAACCACCAATCGAAGACATCAAACCTTTATCAATCACAGTAGATCCAAACTTCACCGAAAACATCAGCAAAATTCAAAGCCCCCAACAACCAAAACAATCCGAAATCACCCACTCACCAAATTCCGTTAAAATGGTCATCAAAAACGGGGTGTTAAtgccaaaacaaaaacaaagaagaTACCGAACCGAACGTCCTTTCGCTTGCGAACACTGCTCTGCGAGATTTACGCTACGTTCGAATATGGAGAGACACATCAAACAACAACATCCTCAATATTGGTCGCAACGACAACGTTCGAATTCGAATCCCGGACGAAAACCCAACGGGaatcaaccgatttcgattcCTAATTACGAACCGCAAAGGATTAATCCGAATCaaaacgatgatttaaaagataacaatcaaatttcttataaattaaaacacgCCATTTTGGCGCAACATCTACGTGGTACTCATAATAGTCAAGAATATAAAGCGGCGAATTTGTTGAATCCGATTCCGATTCAACCGAAACGCGAAGAGGATGATGAGTGCGCGTTGATTATTGATGAACCGGTTGATGATCGTATGGATACTGAAGAAGATGAATGCGTTGAAATGGAACGAAAACAACGGTTGTGCTTGGAGGAGAAATTGAGGGAATTTCAACAACCGAAATTCGATGTGTTGTTGAATCAGAAAAGGAATGAGGATGGACAGGATTTAGTTCCGGTTTCGAGGTTGTTGGATAATGCTTCTCAACAAccttttaaagattattttaaaagtgaacGGGAGGAACACGATGGTGATATTGTTAGTGAGGAGGATGAAGAGGGTTTAGTTGCTAGTGGAAGTACAAGTGAAGCTAATTCTGGAACGGATGAGAATAAatctgAATCCGAAAATCCAACTCAAGGCCcggtaaaaaagaaatcagcATACTCTTTGGCCCCAAATAGAGTAAGTTGTCCGTATTGCAATCGAAAATTTCCATGGACATCTTCGTTGCGTCGTCATATTTTGACTCACACCGGTCAAAAACCGTTCAAATGCAGTCACTGTCCCTTATTGTTCACAACAAAATCGAATTGTGACCGCCATTTATTAAGAAAGCATGGAAATTCCGCAACAACCATCGTTAACGACGTCACCAATAATAATTCcaacaataattttcttgttaGAAACGTACCAGAGCGTCCGTACAAGTGCAATAATTGCCCGAGTAGCACATTTTCGACAgcttcaaatttaaaaaaacacattcACGGCAAACATCAATCGAATGAAGATAAAATAAGCCACGGTTATGATGCTGGAAGTAGCGAGGATGAGAAGCAACATCATGAATGGGaccatcaaaatttaaatgttaaaagtaCCGATGTAATAGCGTCATCTTCTGATTTACCATTTAAGTGCCATTTGTGTGATGGATCTTTTTCGGAACGAAACGATTGTTTAGATCACATAAGAGATAAACATCCGTCCGAATTTGATTTGTTACTATCGAAAAATGCTCTTGATAACAACGCATCTTCACCTCAAGAAGAGAACTCTCCGAACCATCATAATCAAAACAACAACGACGAAGACGACCAAGAAAATCGCGGTAAATTTCCAGATTATTCAAATCGGAAAGTAATATGCGCATTTTGTATGCGACGTTTTTGGTCCGCCGAAGATTTAAGAAGACACATGAGAACACACACCGGTGAACGACCATTCAGTTGCGACATATGCCGTAGGAGATTTACATTAAAACACAGCATGTTACGTCATCGTAAAAAACATAGTGCTTCGAGTGAAAATGACACGAATATTAATAGCGATGAGGATGTTAATCCAAGTTTAGaagttaaaatgaaaaatttaatgaaaacgaATCTAACTGAGGATTCCGATGGAAACGAAAGCGGCGATTTGATTAGTAATTTACTTGGTATTCAAGGATCAATTGTTGATCAAGTTTTGACAGCTACAGCCGATGACGCTGCTAAACTTTTGGGGgttaaaaatcaagaaaaataa
Protein Sequence: MQGNVCMPQDLETGSSPPPQNNSDINESGMDLSMNEPKIKAAKELIQNHQSIINDSGFISSSNTTHHTDNNQSDSDNRSDCSSSPEKTYCCPICNNMLTGQHEFTLHIRCHNESATTNEKGAGYICRICGKVLCSSSSLDRHVLIHSGERPFSCNICGDTFTTNGNMHRHMRTHSIKNDYESDSGGSSDGRSDTRSETRSETRSETRSETRSETRSEARSETRSEARNSCIKEFNNNQIEKGFKRKLEDMDEFKNARIKIELDDEQFKCPVCEREDFNSIENLKIHLIDNHPDHPAECDLCKANFPNIKALNLHRNTVHADQNGKKSSIIGFRDLTDTDFSSEKFPHIAKYRCEEFLHKSSSSDVKYQCQKCPRAFPCATSLQLHEKDCAATGINFPIPKMDPSLVRKTEFFNTLDLQDNSPEKIHKKILDNVKFDNTKDLADIQSIISMTANGSFLQHLTKTDSLPQDNLQSEKTEEEEAQDLFAIEFRKMKLRGEFPCRLCTAVFPNLRALKGHNRTHLNGNNNGTYHCNMCPYSSPDKAALIRHMRTHNGDRPYECSLCKYAFTTKANCERHLRNRHAKSTREEVKNAIIYHPSEDPTNDELNKLAKDDKKLNVYGDEIEKSSPKTPLNEPYPRREMNQFPWGNQNVPKTPPKPSYSIQEIIKNLSENKSPMIPLNYSTPPLITPPNSMHTSTPQKPKIHVKNLEALQHIDYESDDHIDKPIDLSTKKSISMESINNDDDKSEDDDSDHRETPEDLTNKTPPMMRFNNMFPQLLQNSPNPNLYTQLALMNISNIPPWGAFSPLFLQAIQNPLLQQEQERLKRQLSGGSVVNMTNKEVFPIPQYPHQYSHQPPLIKPPIEDIKPLSITVDPNFTENISKIQSPQQPKQSEITHSPNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHIKQQHPQYWSQRQRSNSNPGRKPNGNQPISIPNYEPQRINPNQNDDLKDNNQISYKLKHAILAQHLRGTHNSQEYKAANLLNPIPIQPKREEDDECALIIDEPVDDRMDTEEDECVEMERKQRLCLEEKLREFQQPKFDVLLNQKRNEDGQDLVPVSRLLDNASQQPFKDYFKSEREEHDGDIVSEEDEEGLVASGSTSEANSGTDENKSESENPTQGPVKKKSAYSLAPNRVSCPYCNRKFPWTSSLRRHILTHTGQKPFKCSHCPLLFTTKSNCDRHLLRKHGNSATTIVNDVTNNNSNNNFLVRNVPERPYKCNNCPSSTFSTASNLKKHIHGKHQSNEDKISHGYDAGSSEDEKQHHEWDHQNLNVKSTDVIASSSDLPFKCHLCDGSFSERNDCLDHIRDKHPSEFDLLLSKNALDNNASSPQEENSPNHHNQNNNDEDDQENRGKFPDYSNRKVICAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRRFTLKHSMLRHRKKHSASSENDTNINSDEDVNPSLEVKMKNLMKTNLTEDSDGNESGDLISNLLGIQGSIVDQVLTATADDAAKLLGVKNQEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01097845;
90% Identity: iTF_01097845;
80% Identity: -