Basic Information

Insect: Onthophagus taurus
Gene Symbol: -
Assembly: GCA_000648695.2
Location: NW:2325253-2327685[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00052 0.04 14.0 4.6 1 23 66 88 66 88 0.98

2 12 1.7e-06 0.00013 21.8 5.9 1 23 114 136 114 136 0.99

3 12 0.00055 0.042 14.0 9.1 1 23 142 164 142 164 0.95

4 12 0.0014 0.11 12.7 7.0 1 23 170 192 170 192 0.98

5 12 0.0013 0.096 12.8 1.4 1 23 198 220 198 220 0.95

6 12 1.8e-06 0.00014 21.8 0.3 1 23 226 248 226 248 0.97

7 12 5.6e-06 0.00042 20.2 0.6 1 23 254 276 254 276 0.98

8 12 0.00033 0.025 14.7 1.2 1 23 281 303 281 303 0.97

9 12 0.00082 0.062 13.4 0.5 2 23 310 331 309 331 0.94

10 12 0.0024 0.18 12.0 3.1 1 23 388 410 388 410 0.97

11 12 8.3e-05 0.0063 16.5 3.9 1 23 464 486 464 486 0.98

12 12 0.0043 0.33 11.1 5.3 1 23 496 518 496 518 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00052	0.04	14.0	4.6	1	23	66	88	66	88	0.98
2	12	1.7e-06	0.00013	21.8	5.9	1	23	114	136	114	136	0.99
3	12	0.00055	0.042	14.0	9.1	1	23	142	164	142	164	0.95
4	12	0.0014	0.11	12.7	7.0	1	23	170	192	170	192	0.98
5	12	0.0013	0.096	12.8	1.4	1	23	198	220	198	220	0.95
6	12	1.8e-06	0.00014	21.8	0.3	1	23	226	248	226	248	0.97
7	12	5.6e-06	0.00042	20.2	0.6	1	23	254	276	254	276	0.98
8	12	0.00033	0.025	14.7	1.2	1	23	281	303	281	303	0.97
9	12	0.00082	0.062	13.4	0.5	2	23	310	331	309	331	0.94
10	12	0.0024	0.18	12.0	3.1	1	23	388	410	388	410	0.97
11	12	8.3e-05	0.0063	16.5	3.9	1	23	464	486	464	486	0.98
12	12	0.0043	0.33	11.1	5.3	1	23	496	518	496	518	0.97

Sequence Information

Coding Sequence: atgccCATGTTTTTACTAAATAATGTCCCCGTTGAAGACATAGTTACCTACGGAAGATACTACGAAGGCGAGGCGTTCGAAAATAGCCACTTTTTGTCCCCGCTGGCCAGCTTTAAGATTAACCATGAGGAAGCGCAAAGAAACTCGTATCCGAATCAACGCAATCAAAAcgaaaatcaagaaaaaatgaaacaatacAATTGTTCTAAGTGCGGAaaagtatttctttttaaacatcaTTTGGTGGCGCACGAGAAAACCCACAACaacatcaatatttttgaGCCCTCACAAACTAATGATAAACCAAAACCCCCGCCGGAAGCCAAACCCCGACCGTATGTTTGtcaaaaatgtggaaaatcgtTTTCGTTGAAGCATCACTTGACATCGCACGAACGTACGCATCTCGGGATTCGACCCCACGCGTGTGAATTTTGtggaaaaacttttacacATAAACATTGCCTTAATACCCACTTGTTATTACATTCTAGTGAGAGACCTTATCATTGTGGTGAATGTAAGAAGAGGTTTACGttaaaacatcatttattATCACACGCAAAGGTACATAATCGAGAGAAACCATTTAAATGCGTCGATTGTGGATTAGCGTTCGCATTACGACGGCATTTAGTAACACACAGTAAATTTCACGCGGGGAAGCGACCCTACGTTTGCGAAGAATGCGGGGAGACCTTTTCTCAAAACGATCAATTGGTGATGCATTCGAGATTTCACGGCTCCCTCAATTCGTACGTTTGCAACGTTTGCGGTGATACATTCACGAGAAAATTCGAATTGGTTACCCATCAAAAGATCCACGGAAAGTTACCACACGTTTGCGAAATTTGTTTCAAAGAGTTTCTTCAAAAACGAACTTTAATCGCACACATGAGAGATCACTCGAAGAAGATTTCTTTGTCTTGTCAAGAGTGTGGATGTGTTTTTACCACACAAGAAGCCTTAGCGTTTCATGTAAAAGTCCATACGACAACGACAACGGAAAAACCAAACCATGAATACCCAAATATGTTATCGAATAACCAACAACAACcgttcatttttaataattgcgatagaaataattttaatttaaataaacttcaTCAGAATGCGATCAAAATTGATCCGACAACGACAACCGGGAAAGGGACTTATTGTTGCCCGGAATGTAATTGCGGTTTTTATAGTGAAGAAGCTTTAACTTTACACAAAAAACTTCATTACGGAGACACAGCTTTAGTTAACGATATTTGTACGTTAGCAACTAATATTCAAAGGGGAAACTTAACCAACCCGAATTTAATGCCtgttaatgtaaatttaaccaattcgcataaaaacactttaaatcACCATCATCCggaacaaaaagaaaagaaatttatttgcGAACATTGCTCGAAAGGGTTCGTTGGTAAACATGGCTTACAACAACATAGACGGAGACACCCAGATGGAACTTGTGTTTTAAAATCGCACGTTTGCGCCACTTGTAGTAAAGCATTCCATCAAAAGAATCATTTAATACTTCATGAAAGGCAACATATGGATTTAAAGGGAAGAAATAATAAGCAAACAGTGATTTATTCAAATATGGAACCAGTTAAGGTCGGGGAAAATCAATTTAGTTGTGAAGTTAAAAGGGAGCAATTGCATGAGAATAAGAGTGATATTActatacaaaatttgaattaa
Protein Sequence: MPMFLLNNVPVEDIVTYGRYYEGEAFENSHFLSPLASFKINHEEAQRNSYPNQRNQNENQEKMKQYNCSKCGKVFLFKHHLVAHEKTHNNINIFEPSQTNDKPKPPPEAKPRPYVCQKCGKSFSLKHHLTSHERTHLGIRPHACEFCGKTFTHKHCLNTHLLLHSSERPYHCGECKKRFTLKHHLLSHAKVHNREKPFKCVDCGLAFALRRHLVTHSKFHAGKRPYVCEECGETFSQNDQLVMHSRFHGSLNSYVCNVCGDTFTRKFELVTHQKIHGKLPHVCEICFKEFLQKRTLIAHMRDHSKKISLSCQECGCVFTTQEALAFHVKVHTTTTTEKPNHEYPNMLSNNQQQPFIFNNCDRNNFNLNKLHQNAIKIDPTTTTGKGTYCCPECNCGFYSEEALTLHKKLHYGDTALVNDICTLATNIQRGNLTNPNLMPVNVNLTNSHKNTLNHHHPEQKEKKFICEHCSKGFVGKHGLQQHRRRHPDGTCVLKSHVCATCSKAFHQKNHLILHERQHMDLKGRNNKQTVIYSNMEPVKVGENQFSCEVKREQLHENKSDITIQNLN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01097843;
90% Identity: iTF_01097843;
80% Identity: -