Basic Information

Insect: Onthophagus taurus
Gene Symbol: salm
Assembly: GCA_000648695.2
Location: NW:982170-1058118[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.44 33 4.8 0.2 2 19 56 73 55 75 0.91

2 10 3.3e-06 0.00025 21.0 0.9 1 23 358 380 358 380 0.98

3 10 4.5e-06 0.00034 20.5 1.9 1 23 386 408 386 408 0.98

4 10 0.041 3.1 8.1 3.8 2 23 715 736 714 736 0.98

5 10 2.8e-08 2.1e-06 27.5 0.6 1 23 742 764 742 764 0.97

6 10 3.9e-05 0.003 17.6 2.6 1 23 774 796 774 796 0.98

7 10 0.008 0.61 10.3 2.5 2 23 1063 1084 1062 1084 0.97

8 10 0.048 3.7 7.8 1.2 1 13 1090 1102 1090 1104 0.92

9 10 9.1e-07 6.9e-05 22.7 4.0 3 23 1266 1286 1264 1286 0.96

10 10 1.3e-07 9.9e-06 25.4 0.9 1 23 1292 1314 1292 1314 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.44	33	4.8	0.2	2	19	56	73	55	75	0.91
2	10	3.3e-06	0.00025	21.0	0.9	1	23	358	380	358	380	0.98
3	10	4.5e-06	0.00034	20.5	1.9	1	23	386	408	386	408	0.98
4	10	0.041	3.1	8.1	3.8	2	23	715	736	714	736	0.98
5	10	2.8e-08	2.1e-06	27.5	0.6	1	23	742	764	742	764	0.97
6	10	3.9e-05	0.003	17.6	2.6	1	23	774	796	774	796	0.98
7	10	0.008	0.61	10.3	2.5	2	23	1063	1084	1062	1084	0.97
8	10	0.048	3.7	7.8	1.2	1	13	1090	1102	1090	1104	0.92
9	10	9.1e-07	6.9e-05	22.7	4.0	3	23	1266	1286	1264	1286	0.96
10	10	1.3e-07	9.9e-06	25.4	0.9	1	23	1292	1314	1292	1314	0.98

Sequence Information

Coding Sequence: ATGTCTCGCAGGAAGCAGAGCAGGCCCATCAGGCATCTTGAGGAGGATGATGGTGTCACACCAACACCACAAAATATTGGCGATGAAGAACAGCAGACGGACCAAGACTTTGCAAAGAGTGAGTCATCGCCGCTTAACGAAGAACCACACTACGAAAGGCCACTCATGTGTCCGCGGTGTCAAGAACAATTCACCGACGTCCAGGAGTTCCTAACCCATAAAACGGAGTGCTCCTTGAAGGCGAAGAAACATGACGAACCCGCTCATTCCGATCCCGAAGATATGGTGGTGTCAGAAGATGAGGACGAAGACACGGGGGGTAAGAGGTTGGAAAGGATGAGGAGGTACCGGCAGGATGCGGCGAACAATAACAGTGTTGATGGGGAAGAAGAGGCGGCACCGAGATTAGACTTCAGGTTTCCAGTACCAGGGGGACACGTGACCTTGGAAGCATTAGAAAATACCAAAGTTGCCGTGGCGCAATTCGCAGCGAAAGCCATGGGGAATAATCCAGACGAAGCTGCCCTCCAAGATCTCGCGGTACTCCAAACAACATTATTTACTTTACAACATCAACAAGTTCTTCAGCTACAACTTATTAATCAATTGCAGCAACAACTATCAATCAATCGATCGAAAGCGAGTAGTCCTGCTTCAATGATTAACGATAACGAACCCCCTGAGCCGCCCCCATCAGAATCGCCACCTCCTCAAATAGCACCCCCAAGAGAACCAAGCCCCGTACCTCCAATTGGTCCGATAGTACCAAAAGCAGAACCAATTCAAGAACCACCAACCTCCGAATCATCCCCATTATTAATTCCCACCCCCTTACCACATTGCGCAGTTTCATCATCATTCGCATCAACAATCATCACACACACAGAACCTCCCCCATCAATGGATGAACCAAACACACTTGAAATGCTTCAAAAGCGCGCCCAAGAAGTCTTAGACAACGCCAGCCAAGGACTTCTTGCAACAAATCTCGCTGACGAATTAGCATTTCGAAAAAGTAAAGGATCCATGTCTCCGTACGATTCGAAAGGTCGAAACGAACCCTTTTTTAAACATCGATGTAGATATTGTGGAAAAGTTTTCGGGTCCGATTCAGCTCTCCAAATACATATCAGATCTCACACCGGCGAACGTCCTTACAAGTGCAACGTATGCGGGAGTAGGTTCACAACCAAAGGAAACCTTAAAGTCCACTTCCAGAGACACAACGCCAAGTTTCCTCACATTAAAATGAACCCTAACCCAGTTCCAGAACATTTAGATAAATATCATCCCCCGTTACTAGCCCAAATGGGCCAACAACCCGCTTTATCACCCGGAGGTCCCCCACCACCACCTCATTTAAGTTTTCCACCAAATCATCCATTCCCACCTACGACTCTTCCATTATATCGACCCCCAGGACCACCAACGGAACTTTTACCCACAAGATTACCTCCTTCCCCGCACAGACCTCCAGAACCTTCGAGATTATTTCCATCACatcaattatttatgaaacgAGAGGAACAAGAAATGCCGGAAAATTTAAGTAAACCCCCAAGAAGTCCAACGCCGCCTTTAGAAAGAACGGAACATCTCGAACAACCCGAAAacgataatcaaaaaatcctCGAAGGAGATAGCAAACCACCGACTGAAATAACACCTAAACAAGAAATCGATACGGAATTTGAACAAGACCAGGAGCAAGAAAGGTACCCATCTCCAGGTCCATATCCCGATGATTGTAGTATCGATAGTAGTAAATATAGCAATGAAGACATGTTAGGGCAAAGAAGTACGCCCGGTATGGAAAATGTTCAAGATGAACCggaaaatttatcacaaaaaggTTCAATAGGCccattaaatataataaccgGACAAAGATTACCTCCTAGTTTCAATTTCGGACACGCGACCTCTCCTCCAAGCAGTGCATCATCCGGAAGTTTGGGTCCTTTTCCAACTACACCACTTCCAGATCCAGCAAAAGATCCGGCAATATACACCAGTCTCCTTCCTCGACCAGGAAGTAACGATAATTCTTGGGAGAGCCTTATTGAAGTAACGAAAACATCAGAAACTAGTAAATTACAACAACTCGTAGATAATATTGAACATAAATTATCAGATCCGAATCAATGCGTTATCTGTCATAGAGTTTTATCGTGTAAAAGTGCTCTCCAAATGCATTATAGAACACACACCGGAGAACGACCATTCAAATGTAAAATTTGCGGAAGAGCTTTCACAAcgaaaggaaatttaaagaCTCATATGGGTGTTCATAGAGCAAAACCACCGATGAGAGTCCTTCATCAGTGCCCCGTTTGCCATAAAAAATTCACCAACGCATTGGTTCTTCAACAACATATCAGACTCCATACAGGAGAACCAACAGATCTCACACCAGAACAGATACAAGCCGCAGAAGTGAAAGATTTCCCATCCCCTGGGGCTTTTCCTCAGATACCTAATTCCATGCATCCATTCCTAGGACAAAACTTCCCCGTACCGGGTTTGTCCCCACTGGGACCTGGAGGATTTCCCGTCAATATGAAGATGGAACTCGATAGGGACGTGAAATCAGAAACTGATTATTTAGAAGACGAAGATGAAGATGACGATGCTATGAGCAACTCGGAACATATCATTTACTCCAGCTCATCTCCTGAAAATCATCATCACAATTCGTTTGTCAACACCACCGTGCAAAAAATGATGTTGCCCAGGCTAAATTGCACACCGGAAGAGATGAATAGAATTTTACCACCGTCATCACCTATAATTCAAAACGGGGAGAAGACACCCGAAGAGCCCAGTCCAAGTCCCGGGATTGAAATTAGGTCTTCTCCTAATCAAATATCGAACACCGTCCagGTTACACGTCCAATTTCTCCACATCACGCGAGTCCTACACCTTCCGAATCAAATTCATTAGGTGCCTTGGATTTGACGCCAAAAACATCTCAGGCACCTATTTCAAGTCCAGGGCCGAATCCAGCACCTCCATCGCTGTTCTCTTCGTTCGGATTACTTCCACCAGGCCAAACGAGTTCCCCTCTGATGACGTCAGCGTTATCATCACTAACTTCCTCGGTGTTAACGTCAACTACGTTCAGTCCTTTGAGGTTAGCTGTTGGTCCAACGGTATTTGATTTGGTTTCAGTGAGGGGGAATACGACTTGCACGCTGTGTTTCAAGACGTTCGCATGCAACTCGGCGTTGGAGATCCACTACAGGAGCCACACGAAGGAGCGTCCTTTCAAGTGCACGGTCTGCGATAGAGGCTTCTCGACGAAGACCGGCGAGGACTGTCTGTGCGGACAGAGGCGTATCCAGGCCACAGGAAGCAGCGAGAAAGCGCAAAGAAAACGCAAACCGAAGAAGGTACCGTCGGTCTTCCCGTTGCCGATGAGTCCTGGATACGCCACTGCTTCCCCGCCGATCCCAAACTGGTGCCAGCTCGCGGGTAACATGAAACAACATATGCTCACGCACAAAATACGAGACATGCCCCAACACATGTTCGACAAACCGCCGCAACTCACCAATTCAGAACCAGAACTAAATCATCCTCAACAACAACCTCTTCAAGCAACAACACCACAACCGCCACCGCCACTACAGATACCAACCATACCACAaattaaggaaattaaatCGGAACCGGAAGTTTCGCAACAAATCATCCAAAACGATACACCCAGCGAACCAGTTAAAAGAGCGCCATCGGAAAACGACCTTCCATTGCCCAAAAGACCTCCAAGCTTACAGGCTAATAAGCACTTGTGCCACGTGTGTAATAAGAACTTCTCGTCCAGCTCGGCCTTGCAGATACACATGCGAACCCACACGGGCGACAAGCCGTTTCGGTGCACGGTCTGCCAGAAGGCGTTCACCACCAAAGGGAACCTCAAGGTTCACATGGGCACGCATATGTGGAGCAACGGGGCATCGCGACGCGGCCGTCGCATGTCTCTCGACCTACCACCCATACCCATGACTCCCAAGGATTCAGAATTTCTCCAGCGGAGGCCAGACCTTTTTTACCCGTACCTACCGGCTCCGTTCCTTAACGGCATGCAGCaaaagcTTAATGAGATCTCAGTGgttcaaaatcaacaaaatggAATGGCAGGTGCAGGTGCGGGAAAGTTTAACCTTTTAGGTTTCGGATATCCACCACCGGACGTTCTGAGACCCGCCACTGGGTCACCAGAAAGACCTCCTTCGAGACCGGCGAGTAGAAGTGAAGCTGACCGGCTTTGGGACCTGCATTTCGAGCGGAAAACCAGCTCTGACACGTCACGGGAGGAGCTGCTTCCTCCAGGAAGAGAAGGTTTGGCCGCATGA
Protein Sequence: MSRRKQSRPIRHLEEDDGVTPTPQNIGDEEQQTDQDFAKSESSPLNEEPHYERPLMCPRCQEQFTDVQEFLTHKTECSLKAKKHDEPAHSDPEDMVVSEDEDEDTGGKRLERMRRYRQDAANNNSVDGEEEAAPRLDFRFPVPGGHVTLEALENTKVAVAQFAAKAMGNNPDEAALQDLAVLQTTLFTLQHQQVLQLQLINQLQQQLSINRSKASSPASMINDNEPPEPPPSESPPPQIAPPREPSPVPPIGPIVPKAEPIQEPPTSESSPLLIPTPLPHCAVSSSFASTIITHTEPPPSMDEPNTLEMLQKRAQEVLDNASQGLLATNLADELAFRKSKGSMSPYDSKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHNAKFPHIKMNPNPVPEHLDKYHPPLLAQMGQQPALSPGGPPPPPHLSFPPNHPFPPTTLPLYRPPGPPTELLPTRLPPSPHRPPEPSRLFPSHQLFMKREEQEMPENLSKPPRSPTPPLERTEHLEQPENDNQKILEGDSKPPTEITPKQEIDTEFEQDQEQERYPSPGPYPDDCSIDSSKYSNEDMLGQRSTPGMENVQDEPENLSQKGSIGPLNIITGQRLPPSFNFGHATSPPSSASSGSLGPFPTTPLPDPAKDPAIYTSLLPRPGSNDNSWESLIEVTKTSETSKLQQLVDNIEHKLSDPNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVCHKKFTNALVLQQHIRLHTGEPTDLTPEQIQAAEVKDFPSPGAFPQIPNSMHPFLGQNFPVPGLSPLGPGGFPVNMKMELDRDVKSETDYLEDEDEDDDAMSNSEHIIYSSSSPENHHHNSFVNTTVQKMMLPRLNCTPEEMNRILPPSSPIIQNGEKTPEEPSPSPGIEIRSSPNQISNTVQVTRPISPHHASPTPSESNSLGALDLTPKTSQAPISSPGPNPAPPSLFSSFGLLPPGQTSSPLMTSALSSLTSSVLTSTTFSPLRLAVGPTVFDLVSVRGNTTCTLCFKTFACNSALEIHYRSHTKERPFKCTVCDRGFSTKTGEDCLCGQRRIQATGSSEKAQRKRKPKKVPSVFPLPMSPGYATASPPIPNWCQLAGNMKQHMLTHKIRDMPQHMFDKPPQLTNSEPELNHPQQQPLQATTPQPPPPLQIPTIPQIKEIKSEPEVSQQIIQNDTPSEPVKRAPSENDLPLPKRPPSLQANKHLCHVCNKNFSSSSALQIHMRTHTGDKPFRCTVCQKAFTTKGNLKVHMGTHMWSNGASRRGRRMSLDLPPIPMTPKDSEFLQRRPDLFYPYLPAPFLNGMQQKLNEISVVQNQQNGMAGAGAGKFNLLGFGYPPPDVLRPATGSPERPPSRPASRSEADRLWDLHFERKTSSDTSREELLPPGREGLAA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01097814;
90% Identity: iTF_01097814;
80% Identity: -