Basic Information

Insect: Onthophagus taurus
Gene Symbol: -
Assembly: GCA_000648695.2
Location: NW:852499-855692[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 1.1e-06 8.5e-05 22.4 0.8 1 23 25 47 25 47 0.99

2 19 3.6e-05 0.0027 17.7 3.3 3 23 54 74 53 74 0.97

3 19 0.082 6.2 7.1 0.2 2 23 81 103 80 103 0.94

4 19 0.032 2.5 8.4 0.9 1 23 109 132 109 132 0.95

5 19 2.5 1.9e+02 2.4 7.9 1 23 137 159 137 159 0.95

6 19 4.3e-05 0.0032 17.5 1.2 1 23 168 190 168 190 0.99

7 19 0.00016 0.012 15.7 1.5 1 23 196 218 196 218 0.98

8 19 9e-07 6.9e-05 22.7 0.8 1 23 224 246 224 246 0.98

9 19 4.9e-07 3.8e-05 23.6 1.5 1 23 252 274 252 274 0.98

10 19 6.5e-05 0.0049 16.9 1.7 3 22 282 301 280 301 0.95

11 19 0.00052 0.04 14.0 1.5 3 23 369 389 368 389 0.98

12 19 0.0055 0.42 10.8 2.9 1 23 395 417 395 417 0.98

13 19 0.087 6.6 7.0 2.5 1 21 423 443 423 445 0.84

14 19 0.0001 0.0079 16.2 2.4 1 23 451 474 451 474 0.98

15 19 6.5e-05 0.0049 16.9 2.4 1 23 486 509 486 509 0.96

16 19 0.00074 0.056 13.6 1.0 3 23 520 540 519 540 0.98

17 19 2.5e-06 0.00019 21.3 0.6 1 23 546 568 546 568 0.98

18 19 1.7e-06 0.00013 21.9 0.3 1 23 574 596 574 596 0.98

19 19 0.013 0.95 9.7 0.2 1 21 602 622 602 623 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	1.1e-06	8.5e-05	22.4	0.8	1	23	25	47	25	47	0.99
2	19	3.6e-05	0.0027	17.7	3.3	3	23	54	74	53	74	0.97
3	19	0.082	6.2	7.1	0.2	2	23	81	103	80	103	0.94
4	19	0.032	2.5	8.4	0.9	1	23	109	132	109	132	0.95
5	19	2.5	1.9e+02	2.4	7.9	1	23	137	159	137	159	0.95
6	19	4.3e-05	0.0032	17.5	1.2	1	23	168	190	168	190	0.99
7	19	0.00016	0.012	15.7	1.5	1	23	196	218	196	218	0.98
8	19	9e-07	6.9e-05	22.7	0.8	1	23	224	246	224	246	0.98
9	19	4.9e-07	3.8e-05	23.6	1.5	1	23	252	274	252	274	0.98
10	19	6.5e-05	0.0049	16.9	1.7	3	22	282	301	280	301	0.95
11	19	0.00052	0.04	14.0	1.5	3	23	369	389	368	389	0.98
12	19	0.0055	0.42	10.8	2.9	1	23	395	417	395	417	0.98
13	19	0.087	6.6	7.0	2.5	1	21	423	443	423	445	0.84
14	19	0.0001	0.0079	16.2	2.4	1	23	451	474	451	474	0.98
15	19	6.5e-05	0.0049	16.9	2.4	1	23	486	509	486	509	0.96
16	19	0.00074	0.056	13.6	1.0	3	23	520	540	519	540	0.98
17	19	2.5e-06	0.00019	21.3	0.6	1	23	546	568	546	568	0.98
18	19	1.7e-06	0.00013	21.9	0.3	1	23	574	596	574	596	0.98
19	19	0.013	0.95	9.7	0.2	1	21	602	622	602	623	0.94

Sequence Information

Coding Sequence: ATGAGTCATATAAAATTCATACAGTTTTATATGTCTACACCTCGTTTgAATCTTTTATCATCatcaaaagaatttaaatgttCCGTCTGCAATCaaggttttgaacaaaaagcaaaattaaaagatcACATGCGTATACataaaccaaaaaatcgaTGTTGTGACATATGTGGAAGTAAGTTTAAAACCAATTATGAATTAAGCAACCATCAACGAAGCcataattcacaaaaaaacaTCCAATGTACACTTTGCGAAGCAAAATTTTCATCGGAGATTGGCAAGAAACAACATATAACAAGGGCTCATCTTAAAACGTATCCCTTTAAATGCGATCAATGCGATAAGGGTTATTTATTCGAATCTGTTTTGAACAACCATAAAAAATCGGTTCATTTAGGAATGGTGCATAAGTGtgataaatgcaataaaaattataaatgcgGGTTTGCGTTTAAACAGCATTTAAAATCGCACGAAGTGGGGTACAAAAAACCGGAATACTCCTGTTCGATATGTTCAAAATTGTTGTCTTCAAAGAGAAGTTTAGAATCACATCTTCGTACTCACGAAGATTCAACAAGATATGTGTGCAAGTTTTGTGGGAAAACATTAGGTTCTCGACATTATTTACAAATCCATGAACGCGCACACAAAGGAGAGAAACCTTTTGTATGTCAATATTGCCCTAAAACTTTCGTGTCAAATTATTTGCTTAAAATGCACGAACGCATTCACACCAAAGAAAGGCCGTATGTTtgtaaaatatgtaataaagcATTTAATCGACATGCGTCGCTTACAATTCATACTAGAATTCATACAGGTGAACGACCGTTTGGTTGTCATCTTTGTGATCAACGATTTTCTTCAAGAACTAATTTAAAGGTGCATCTAAAAaagaaatcaatgaaaattggTAAAAGGTGTATACTTACACGAAAAAGAaaggataataataatacttcacACGATGATGCAACAATTCGATTAAACGAGCTTATCATAAAAGATGAGCCATACGATGTAAATTCCGATGGAGAAATTAACCAAGTTGAAAACACCAAGAAAGAAAGTGAAGAGAAAACATCGGAAGCGATACTTTGCGAAGTTTGTGATCAAACATTTACCAACAATATCGAATTCTGCTTACACACGATTACTCATAGTGAAGATGGTAAATATCATTGTTATCTATGTAATTATAGAAGTGCTTCGAAATATAGTATCGAATCACATATCAGAACTCACGATGGCACTGCTAAGTATAAATGtgaaatatgtaataaagGTTTTGGAATAAGGACACATGCTTCacaacataaatattttcatagtGGAGAAAAACCGTTTCAATGTGAAATATGCGgaaaacattttatgttttccTGGTTCTTAGCATCTCATCGAAGATCTCAACATTGGGAAATACTAACTGGAAAGCCATTAGTCAAGTACGATTGTCGAATTTGTAAAAAACATTATACATCATCAACTGGATTAAAACGCCACCAAGCTAGCATTCATAATATGGGGAAACGTGAAGCATCCCGCTTGTGCGATATTTGCGGTAAAAGTTTGTCtagtaaagaaaaattgaaatttcataGAAGAATTCATACCGGATACAAACCATACGCTTGTACGGTGTGTTCAAAAgcatttacaaaaaaagaacaattaaaagaaCACGAAAGAGTGCACACCGGTGAAAAACCGTATATTTGCAACTTTTGCGGAAAAGGATTTAGTCAAAGAAGTCCTTTAAGAATACACGAACGTATACATACCGGTGAACGTCCATATAGTTgcaaaatatgttttagggGATTTGTTTCTAAAGGAGTCATGGACATACACATGAAATCTTGTCAAGGACAGACTCGACAAAGTTCTCGcaacacaaataaaatataa
Protein Sequence: MSHIKFIQFYMSTPRLNLLSSSKEFKCSVCNQGFEQKAKLKDHMRIHKPKNRCCDICGSKFKTNYELSNHQRSHNSQKNIQCTLCEAKFSSEIGKKQHITRAHLKTYPFKCDQCDKGYLFESVLNNHKKSVHLGMVHKCDKCNKNYKCGFAFKQHLKSHEVGYKKPEYSCSICSKLLSSKRSLESHLRTHEDSTRYVCKFCGKTLGSRHYLQIHERAHKGEKPFVCQYCPKTFVSNYLLKMHERIHTKERPYVCKICNKAFNRHASLTIHTRIHTGERPFGCHLCDQRFSSRTNLKVHLKKKSMKIGKRCILTRKRKDNNNTSHDDATIRLNELIIKDEPYDVNSDGEINQVENTKKESEEKTSEAILCEVCDQTFTNNIEFCLHTITHSEDGKYHCYLCNYRSASKYSIESHIRTHDGTAKYKCEICNKGFGIRTHASQHKYFHSGEKPFQCEICGKHFMFSWFLASHRRSQHWEILTGKPLVKYDCRICKKHYTSSTGLKRHQASIHNMGKREASRLCDICGKSLSSKEKLKFHRRIHTGYKPYACTVCSKAFTKKEQLKEHERVHTGEKPYICNFCGKGFSQRSPLRIHERIHTGERPYSCKICFRGFVSKGVMDIHMKSCQGQTRQSSRNTNKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -