Basic Information

Gene Symbol
-
Assembly
GCA_000648695.2
Location
NW:1178195-1180560[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.62 4.1e+02 0.8 0.0 2 18 124 140 123 141 0.83
2 4 9.5e-07 0.00062 19.4 0.0 1 43 202 246 202 248 0.90
3 4 4.8 3.1e+03 -2.0 0.0 23 42 294 312 290 313 0.72
4 4 4.2 2.8e+03 -1.8 0.1 20 26 342 349 332 357 0.64

Sequence Information

Coding Sequence
atgaataaaaataaacaggaaacaaagaaaagaaaacgttCGAATTCGGTGGAGATTAAAACCGAGGGAAATGTAAGCTTCAATCCAAAAGTTGAGGAATTTTCGCTGGAAAACTCTATAATCGAGATAGATACATCTCTATACCgcaataaaaacgaaattaaaagtattaaagatGTAACTAATGATAAATTATGCGACGCTATTAATCGAACGAATAACGAAATGGAACAAATTTTTAGAGATAACcagcatttaatggatttaagaattaaaataccGTTTAAAGTCCCAAAAGCACATCTAATTGAGAAATCAGTGGTTGCAATACAATCGAAAGGTTTATTTGATGGAATTCccataaatacaaaaaaatacacaaaacgtgaagatgatttaattttaagaaacttTAAAGAGTTTTGTGAAGCTCACAAAATCAAACATGATCCAACCCcgtttgtaaattttgttattggtGGGAGACATGTGTTAAGCGTTTATGAACGATTACAATTTGTGCGTTATATTGGAAAGGGGTTAAACGATAGGAAATTATATAGTATTTATAAACGATTTCAGTTATTATGTAGTACAACTAATAAAGGAAGattctCTTCAATTGAagatcaaattttattaacttacatcaataataacaatgatgataaacaaaaatttgctaaaatagccaaaattttaaatcgatccaagagtcaaattttaaaaagatattcGACCATTACAGAATCGATTGAAAAtgattttgccAAAATGACTGGTATACCAAAAATAGAATATTTAGTTTCAAAAATGATGGaggttttaaatatttcgacGATTAAAGAACTTAAAAGTACCGAACTGACGAGTGAATTTTGGGAGGAAATAAGTAAACAATTAGATTATCCcttatatcaattaaaaaggTTTTGGAATGCGAGCGTTGCCACGAAgctttttaaccaaaatatcaaaattaacaaagtttTGAGGAAAATTGTTGATACTTTGCATGAAAAAAACATTACCGATTGGAAAAGTATCGATTGGAACGAAATTTGTAAACCTTTCGAACGCAAATATTACACACCTTcctttatttatgataaatttaagGATTTAAGAAGGTGTAACATCCGCAAAGAATATCAACAAGATCCACAGGTgtgtataaaaatgttgaaggaTTTATTTAGTGAAAATCCGCTTTTATTGAGGAAAATAAAATCGTATGAATATGAAGATGGAAGAATTGCAAAATATTaa
Protein Sequence
MNKNKQETKKRKRSNSVEIKTEGNVSFNPKVEEFSLENSIIEIDTSLYRNKNEIKSIKDVTNDKLCDAINRTNNEMEQIFRDNQHLMDLRIKIPFKVPKAHLIEKSVVAIQSKGLFDGIPINTKKYTKREDDLILRNFKEFCEAHKIKHDPTPFVNFVIGGRHVLSVYERLQFVRYIGKGLNDRKLYSIYKRFQLLCSTTNKGRFSSIEDQILLTYINNNNDDKQKFAKIAKILNRSKSQILKRYSTITESIENDFAKMTGIPKIEYLVSKMMEVLNISTIKELKSTELTSEFWEEISKQLDYPLYQLKRFWNASVATKLFNQNIKINKVLRKIVDTLHEKNITDWKSIDWNEICKPFERKYYTPSFIYDKFKDLRRCNIRKEYQQDPQVCIKMLKDLFSENPLLLRKIKSYEYEDGRIAKY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01097400;
90% Identity
-
80% Identity
-