Basic Information

Gene Symbol
-
Assembly
GCA_000648695.2
Location
NW:191726-193133[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.2e-08 4.7e-05 23.0 2.0 1 45 8 68 8 69 0.86
2 2 1.2 7.9e+02 -0.1 0.0 12 28 195 215 193 217 0.81

Sequence Information

Coding Sequence
ATGTCTTGCAAACGAGGAAACAGACTACGCTTTACCAAAGAAGAAGACGAGAAATTGATACGAGAAGTAGGAAATCACCCTGTACTTTACGATTTACAAAATAAGtcatataaaaactttaatataaaagaaaacacgTGGCAAGAAATTAGCAAATTGGTGGTCAAAAGTGttgaGGAGTGTAAAACACGATGGAAAAGtttaaaagatgtttattTCAAGAAAGAAAGACAAGGGAAACAAGGAACAGGATCTGAAGCAAGACGGATAAATAATAACTGGGAGCATATGGAATCACTAGCATTTCTAGAAGTTGCTGGGAAGCGTAGATCGACAATAACCAACGTCTCTGAAACTGAGGATATAAATTCCGACCATATTGACAGTATCAATGTCAGATCAATAAGGAACGCCTCTGAAACTACCATGACGGTAAATGTTTCAGAGAGTCAAGTTGATGAGAGTGTCAATGTCAACGACAGCACAAATGAAACTAAGCTTGAAGACGACATATCACCAGTTAAGAAAAGAAGAACAATGAATGAGAAAGTGCTCGCTGCACGTACTGAAGTTTTGAATAGCATTAAAGAAGCCGTACAAAGTTGTGGAAACCCAGTAAAAACGTTTTTCGATAGTATTGCACAAACAGTAATAACATTTCCTCCTACTCTTATAGTGGACGCAAAAAGGAAGGTGTTGGATGTCATTAGCGATTTAGAATTACAAAATTGCGGCGTTCGACCAATGTCAATTTATAATAGAATATCCAATAGTTGCGCGGATTCAATGACGAATTTCGAAAACtttttgcaataa
Protein Sequence
MSCKRGNRLRFTKEEDEKLIREVGNHPVLYDLQNKSYKNFNIKENTWQEISKLVVKSVEECKTRWKSLKDVYFKKERQGKQGTGSEARRINNNWEHMESLAFLEVAGKRRSTITNVSETEDINSDHIDSINVRSIRNASETTMTVNVSESQVDESVNVNDSTNETKLEDDISPVKKRRTMNEKVLAARTEVLNSIKEAVQSCGNPVKTFFDSIAQTVITFPPTLIVDAKRKVLDVISDLELQNCGVRPMSIYNRISNSCADSMTNFENFLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-