Otau004270.1
Basic Information
- Insect
- Onthophagus taurus
- Gene Symbol
- -
- Assembly
- GCA_000648695.2
- Location
- NW:10742-13850[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-11 3.3e-08 32.7 0.0 1 43 52 94 52 95 0.91 2 2 1.9 2.3e+03 -2.0 0.0 16 22 169 175 166 183 0.68
Sequence Information
- Coding Sequence
- ATGGCAAGCGGCAAGATCCTCTTTCGCGACCGAGGAGGTGGTCCATCTATTCTGGACAATCGGGATAGATGGACCATGTTAATTTGGGATAGATGGACCAGAAAAATGCCAACTAAATATAATAGAAAGGGGACATCAAAAAGAGGAGACTGGTCCGAAGAGTCGTTAGTAAATGCTGTTAAAgcgataaaacaaaatgaaattggtGTAAATGCTGCTGCTAAAGCTTTCGGCATACCAAAAACAACTCTAAAAAGGCGTCTTAAATCAAATAACTTTAGCAAGGGTTCCATGGGGAAACCTTCACTCCTTGGTaccgaaaatgaaaaaaaaatcgccgcacacataaaaaaattacagtcACATGGTTTCACGCCTACTAGAGACTCCGTTAGATACATGGCTTACTATTTGGCCGAAAGTCTGAAGTTAGTACACAGCTTTAACACTGAACGCAAACAAGCAGGATATGACTGGCTGTTATCGTTCCTATCTAGAAATCCACAACTCTCCATTCGTCAAGCGGAGGGTGTTTCAATCGCGAGGGCAAAAGGTCTTAACAGAGAAACTGTTGACAATTATTTTCAGCTTTTAGGAAATGTTTTAAGAGAAAACAACTTAATTGATAAACTAGGGCACGTTTTTAACATGGATGAAACGGGTTTGCAGTTAAACAATAAACCAGGAAAGGTTATCGCAATCAAAGGTTCCAAGAATGTGACATCTGTTACTTCCGGAGAAAAAGGTGAAACGATTTCAGTATTAGCATGTGTTAATGGAGAGGGAACATTCTTACCACCTTTTTGTATTATGAAAGACGGACATACGTCACACACTAGTTGCATTGAAATGCTTGAGTTTGCAGATAACAACGACATTATTTTAATGAGTATTCCTCCGCATACCAGTCATTGGCTGCAGCCATTAGATCGAACTTTCTTCAAGTCTTTAAAGAGTAACTACTACTCTGCTTGTAACAGCTACATGATAAATAATCCATCTAGAAAGATAACTCGACTGCAATTTGGCACCCTTCTTAGATTAGCTTGGGGGAAGTCTGCAAACGTTGATAATGGCGTTAGTGGCTTTAGAACATGTGGAATACTACCTTTTGAGCCCAAAGCTATCCCTGACTACGCGTTTCTAACTGAAACCAATGAATCGACACAAGTTCAACCGGAACAAATAACTGCTGCAACTAAGTCTAGTAAAACGAATAATGCCTCAGCAAGTGATCAACCAGCTGTTGCTAGACTCAGTTTCACAAATGAAGCTCTCGCTGTTCCTGGCCCGAGCTCAACCCCGATATTCAAACTGTTTCAGAAGGTGAAGTTGTCAACATCTGCAAGTAGTCCTCAAGCTTCGCCCgttttagaacaacttttatctTATAATACCGAAATTCTATCATCACCACCAGCAGTTATTCAAGTAGAACCTCATTCAGAAACATATTCACAGTTTACACTTTCAAACTCAGGAAATACAGAAGAAAACGAATATTCTATTACTGGTAAAATAGGTAACTTTGTCTCCAACTTTGAAGCGTGA
- Protein Sequence
- MASGKILFRDRGGGPSILDNRDRWTMLIWDRWTRKMPTKYNRKGTSKRGDWSEESLVNAVKAIKQNEIGVNAAAKAFGIPKTTLKRRLKSNNFSKGSMGKPSLLGTENEKKIAAHIKKLQSHGFTPTRDSVRYMAYYLAESLKLVHSFNTERKQAGYDWLLSFLSRNPQLSIRQAEGVSIARAKGLNRETVDNYFQLLGNVLRENNLIDKLGHVFNMDETGLQLNNKPGKVIAIKGSKNVTSVTSGEKGETISVLACVNGEGTFLPPFCIMKDGHTSHTSCIEMLEFADNNDIILMSIPPHTSHWLQPLDRTFFKSLKSNYYSACNSYMINNPSRKITRLQFGTLLRLAWGKSANVDNGVSGFRTCGILPFEPKAIPDYAFLTETNESTQVQPEQITAATKSSKTNNASASDQPAVARLSFTNEALAVPGPSSTPIFKLFQKVKLSTSASSPQASPVLEQLLSYNTEILSSPPAVIQVEPHSETYSQFTLSNSGNTEENEYSITGKIGNFVSNFEA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -