Basic Information

Gene Symbol
Mblk-1_1
Assembly
GCA_000648695.2
Location
NW:601190-707654[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.8e-18 8.6e-15 53.8 0.0 1 44 346 390 346 391 0.94
2 2 1e-18 1.3e-15 56.4 0.0 1 43 692 735 692 737 0.95

Sequence Information

Coding Sequence
ATGGCGGACTGTTCATATTCGCGATGTATCCAACAGAAAAGAAACATTAGAAGGGAATTACAACGATGGACAAAAAATATGGTGTACATAGTTGggTTGGAAAGGATAGCTGAAGAGCTGATGGGTCGCAGGAAATGGAAACTATACCAAGAGTCTATGTCAAGGAACTATCTGCAGCCGCTAAACAACAACGTAAAGAGAGCGAACGATACGGATCCGGGTACAGCGATCCTGCACCGAGACGCGTCCAGTCCAGACTCGAAGGACCTGGTGAAGGTCGCGAACAGCGTCCACAAGACGCCGGAAGACCATCAAATCGTTGCCGCCCCCGCTGCCGTTGTCTTCGCCACGCCGCCTACAGAGAACGGAACGTCGCGTTCTGGTGGCGAAAATCCTACGGCATCATTACCATTAGAAAACGGCGATATCTCAGCATCCGACACCGGCACCTCCGCCAAAATTACAGCGGATATCATCAAAAAGGAGGAGCCGCTGTTAGAGGCGCCCTCCACAGAGGTTCCGCAGGACGCGGAAGACCAAATAAAAGATTGGTCGCCGCAGAGCAAGTGTTACTTCTGCGTCGACGGCAAACTGGATAGTGAACATAATAATCACGGGGGTTTGagTCCCCGTCATTCGGATTCAGATTCAAGCGATAGTAGAAGCGACGCAGAACCGCCAACGTTGAGTCCAGCAGCGTTTCCAAATAATCGACAGCGTCACCACGGGTCCCATAGGAACATGACCAGCGTCGAACAGAATATGGCTGTAATAGCGGCCGTCACAAACGCCATAAATTCCGGGTCGCCGATGCCGCACCTAGCCCTTTACCCTCAGTTCTATCCATTCATGGGTCAGAACGCGGCTTCGGCTGCCGACGGGGCCGAGGAAAAGACGGGCGAGGAGCCGCTGGATCTCAGCTCGAAATCGAGCAACAACGGGACGGACAAGATGCGCATCCTCGACCCGAAGCTCTTTAGTTTCGATGCTCGGTCAAAGAGCAAGATGCCTCCGGTAGTGGGCAGACGAACGTACACCGAGGACGAACTGCAGGCGGCTCTCAGAGACATCCAGTCGGGAAAGCTGGGCACCAGGAGGGCGGCCGTCATTTATGGCATCCCCCGCTCAACGCTCAGGAACAAGGTATACAAATTAGCGCTAGAGAGAGAGCGCGAGTCACATCTCAACCCGGTCACATTGAAGCTAGACGAAGACGATCCGATGGACGAGGACAAAGACCTGTCCGGGGCCGAGGAGGAGAAGGAGGTGGAGAAGGCCCTAAAGGGTCCGCTCATCTCCATCGAGGACATCCTGCGACTATCCAACCTCAACAGCACGGAGGCGCTTCAGAGGAACGTCGGACCCTACCTCCAAAATCTCCTGCAGCAGGGCGTCGGAGGAGGTGGAGGTGGAGGAGTGGACCCGAAGCCGCAGATCGATCCGGACCCGATCCTGCGAGAGGTCCTCCGGAAGATCGTCGTCGAAGAGAAACTGCGGCCGCACCATCACAACAACGGAGATAGTGAGAAACTAACCCGACCGAGTCCGTCGAATTCGGCCGGTTTGAGGCAAGAGAAAAGGTCTGAATCTGACATGGAAACAGAAGAGGTGCCGTCGAATGTGATACTAAAGATTCCGTCCTTCAAGCCAACCACCACACCAATCGCTCTGCCAAAGAACGGCTGCGATATCATAAAAAACCCAATGGAACATGTCGGTGCTGTGATCTCGCCGCCGGTTACAAGCAACGAGTCCGCATCGCCGCCCATTCAACCCAAGATGTCGTTAAAAGATGTTAAAGATGCCATCGCCAAAAGTATATGCGGCAAGTTCCATCAGAGCCCCGATCCAAGGTTTCCCATTCCGGACCTTGACATCAAACGAGGTTTTACCCCACCACTCGGAGGCCTTCCCATTATTCAAAAGCCACCGCAAGCTGAAATCCCACCACGCCCTAGTTATCAACCGCCCCCGGTACAGTCATCTAAACCTCCGAACACCACGGCAAACACTGCCGCGGCAGCCGCAGGAGGGAAGGGCACTCGACCGAAACGCGGTAAATACAGAAACTATGACCGCGATAGTTTGGTAGAAGCCGTCAGAGCTGTGCAAAGGGGTGAAATGTCCGTACACAGAGCCGGTAGTTATTACGGCGTTCCACATTCGACACTCGAATATAAAGTGAAAGAGCGACATCTAATGCGTCCGAGGAAAAGGGATCCCAAACCTAATCCGGTTGACGAGAAAATCGCTTCTCTCAAACAAAACGACCTCCGCAACGCAGAGAAATTCAAACCAAATCCACCACCACATCTCAAAACCTTACAAAGGTTACCGCCGACATCTCCTAACGGACGAATGCCAATCATCGATCCAAATTGTCCAATTCAGTATCCACCTCCATTCCCATTTTGGCATAATTTCTCAACCTTTCCACCAGCAGCAGCTTTCCCAACAAACCCTGAACAGTACTATGCCTCCCAGATGATGCAAAAGCTTCAAGAAGAATCATCTCGTACAACGCCTCATACAAACATAGTAAATCCAATACCTCCAGCATTACCTAAAAATACAAGACAAATAGCCGAATCCCTCCTGACCTCAGGAGCCAACGGATCATTCCTCGACGGCATTATCCGTTCTAGTTTAGAATCTGGAGTACCAACATCCAACGATGACGACTcaataaaagaagaaaccACAAAACCAATAGCACCAGAAAACATGTCAAATAAAGCCTTACTCGACCAACTGTGTCGAAATAGTCGCTTAACCCCCTTACCGAAAATGTCAGAACCGAGCAGTTCGTCAGGGGACGAAAGCTATAGAAAAGGGACGAGTCCCCCGAACGCCTCGGACAACAACAAAGTCACCTCCCCTAAACGAAACGACGAGGTTCACACGATAGAATCGTCTAACGATTCGAACGATGCGTCGACGAACGATAAAAAAGTAGAAGAACCACCACTGAAACCTCCTCAAGGGAGAATATACCTAAAAACGGAACTTGCTAACCCGGACAATTTAAAGCCAGAAATGTTGATGCGATTCCGCGACGTTCTTCACGACGTCGATCGAAACGGGGTTGTGGAAACTAACGATGGCCAAACGATCCAGGACTGA
Protein Sequence
MADCSYSRCIQQKRNIRRELQRWTKNMVYIVGLERIAEELMGRRKWKLYQESMSRNYLQPLNNNVKRANDTDPGTAILHRDASSPDSKDLVKVANSVHKTPEDHQIVAAPAAVVFATPPTENGTSRSGGENPTASLPLENGDISASDTGTSAKITADIIKKEEPLLEAPSTEVPQDAEDQIKDWSPQSKCYFCVDGKLDSEHNNHGGLSPRHSDSDSSDSRSDAEPPTLSPAAFPNNRQRHHGSHRNMTSVEQNMAVIAAVTNAINSGSPMPHLALYPQFYPFMGQNAASAADGAEEKTGEEPLDLSSKSSNNGTDKMRILDPKLFSFDARSKSKMPPVVGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERESHLNPVTLKLDEDDPMDEDKDLSGAEEEKEVEKALKGPLISIEDILRLSNLNSTEALQRNVGPYLQNLLQQGVGGGGGGGVDPKPQIDPDPILREVLRKIVVEEKLRPHHHNNGDSEKLTRPSPSNSAGLRQEKRSESDMETEEVPSNVILKIPSFKPTTTPIALPKNGCDIIKNPMEHVGAVISPPVTSNESASPPIQPKMSLKDVKDAIAKSICGKFHQSPDPRFPIPDLDIKRGFTPPLGGLPIIQKPPQAEIPPRPSYQPPPVQSSKPPNTTANTAAAAAGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLRNAEKFKPNPPPHLKTLQRLPPTSPNGRMPIIDPNCPIQYPPPFPFWHNFSTFPPAAAFPTNPEQYYASQMMQKLQEESSRTTPHTNIVNPIPPALPKNTRQIAESLLTSGANGSFLDGIIRSSLESGVPTSNDDDSIKEETTKPIAPENMSNKALLDQLCRNSRLTPLPKMSEPSSSSGDESYRKGTSPPNASDNNKVTSPKRNDEVHTIESSNDSNDASTNDKKVEEPPLKPPQGRIYLKTELANPDNLKPEMLMRFRDVLHDVDRNGVVETNDGQTIQD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-