Basic Information

Gene Symbol
ct
Assembly
GCA_000648695.2
Location
NW:86892-135184[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.5e-27 2.4e-23 81.5 0.0 2 72 370 441 369 446 0.95
2 4 0.08 5.5e+02 0.3 0.0 26 55 574 603 567 607 0.82
3 4 1.3e-32 8.8e-29 99.0 0.0 2 77 753 829 752 831 0.96
4 4 1.1e-30 7.2e-27 92.8 0.0 3 75 997 1070 995 1074 0.95

Sequence Information

Coding Sequence
ATGCAACCATCAGCATCGGTTTCATCGCCCACTGAGATGGACTTGCAAGCAATGCAATCGATGAGCTGGTTGttcaaaaaggaaaattttttcaacctGGCCCAATTCTATCAACACaCTGCCGCATTGAAAGATAAAGATATAGCCGAATTAAAAGGACAGGTGGCTTccttagaaaataaattagaagCGAATATGGATCGGCATAGCTTCGAAAGTGAGATAACCGCAAAAGAAAAACAGTTTTTGTTACAGATTTCGCAACTCGTCGAAGAATTACAACGAAAAGAAGCTACGATAGCGAAACTACACGAGGGTTTCTCAAAAGTGCCGATTTTAGAGGAACAACTGGACCAAAAGAACCAATACATAGCCAAATTGGAGGCGAAATTGGAGAGTCAAAAAGATTacgaagatatcaaaaaagaattgagCATTCTTAGGCTTTCGACGCCGACGACGACGCCGTCGCTGGAAAATCAAAAACCGTTAAATTTGGATAACCTAAAATTGGAGCCGGTCATTACGAAAAGTCCCGAGCCTTCGTTACCGGAAGAGCGAAAATCCCCGAAAACAACGCCATTTCCCCCGCATTTTCAAAACGTTGAAACTTTCGGAACGTTACTCGGCGAAGAAATTGTTGCGAATTGGAAGCGAAGTATCGAAACTTTAAGCGGGAAAGCAGTTTTAAGTGAAACTGAGACAACCGAAAAAAGCACAGCTTCAACCCCGCAACCTCAAGAAATTATCCGACAAAATTCGCCGATTATTAACGGTCAAAATAACCCTAAAAGCCCggaagataataataatttaagtcacaacaataacaacaacaacatcccaattttaacctcaaacgtAACAGTTTTGgcaaacaatttcttaaaaacgGAAGATTTAAAAAGCCCATTTCGATTCGAAGACCACCAAccccaacaacaacaacacccacaacaacaacaaagatCGTTTCGGTTTGCCGAAGACATGGGACTCCCGCCCGGTTCGATGGTCGGGCGTTTAGGTGAAAGTTTAATTCCAAAGGGCGATCCGATGGAAGCGAGGTTACAAGAAATGTTGAGGTTCAACATGGATAAATATGCGAGTCAAAATTTGGATACGTTGCATATCTCGAGGAAAGTTCGAGAGCTGCTTTCGATTCACAATATAGGTCAAAGACTGTTCGCCAAATACATTTTGGGGTTATCGCAGGGCACCGTTTCGGAATTACTCTCAAAACCGAAACCTTGGGATAAATTAACGGAAAAAGGGCGAGATAGTTATCGGAAAATGCACGCGTGGTCATGCGATGAAAATGCGGtgcttttattgaaaagtttaATACCAAAGAAAGATAATTTTTCAACAGGCAAAGAGATTGCATCTTACGGTGGTCGTCAAGAGACGGGTCCTCGCGAAGCCGATTTCAACGACGAAAGAATCGCTCACATCCTAAACGAAGCTTCGCAAATCCACGGCTCAAAACATAACCTCCAAACCACCGAAGACACGCACAGCAACGAAGACTCGAAATCGCCGCAAGGATGTTCGAGCCCCTTCTCGAAGGACTCGTCACAAAAccgaaaactaaaaaaatacgaaaacgacGATATCTCCCAAGAGAAAGTCGCGCGAATTTACCAAGAAGAGATGGCCAAATTGATGGGGCGAAGAATCGAAGATTTTCGGACATCTCGCGATGCGATGTTTTTACCTCAAATTTTTGCTGGGGGACATCTTGAGCGTAGTCAGGAAGAGATGCGAGCTCTTTTGGATGCTTACCATCAATTGGCGAAGATGAATTCGTGCGGAAATCAAGGTGGGTTTGGAAATTTTGGGTTATTAGCGCTTCATCAGCAGGCGTTGGCGCAACAAAATGGGGGGGTCCAAGATTTATCATTaccaaaagacaaaaaaatcaaCGGAGATGACCAATCCAAAGAAGATAACAATACCAAAGACGATTCAAATTTACCCAATTCAAAAGTAGGAAGTGCTTTTAGTTTGGTTAAGCCAAAACTTGAAACATCTTCATCGACGACATCAAGTCCTTTGGGTAATACGATTTTACCACCGATAGGGGGAGGGGGTGATGTTGATTTTGGTACGGCAGCTTCGGCGAGTCCGCTTCAAAGAATGGCTTCGATTACGAATTCTTTAATCTCTCAACCTCCTTCGCAACCTCACCCCACCACGAATCAACGACCTTTAAAAGCGGTTCTTCCCCCGATTACTCAACAACAATTCGATATGTACAATAATCTTAACACTGAAGATATCGTGAAAAAAGTGAAAGAACAATTGAGTCAATACTCGATTTCTCAACGATTATTCGGCGAAAGTGTTTTAGGTTTAAGCCAAGGATCCGTTAGTGATTTATTAGCAAGACCTAAACCTTGGCATATGTTAACGCAAAAAGGTCGAGAACCTTTTATAAGAATGAAAATGTTTCTTGAAGATGATAACGCCGTTCATAAATTGGTGGCGAGCCAATATAAAATAGCCCCGGAGAAATTAATGCGGACCGGAGGTTATGGTGGAGCTTGTAACATCAAAggtaatttaaatcaaaatactaaGATTCTCACGGACGCCACTGGAATTTTAACTCAACTCTCGAAAGACGTTCAAAACCCTCTTCTCCCGcctaattttaatcataaccTTACGAACCTCGCCCAAAAtcaattatcaaatttaacatCGAATCAACTTTCGAATTTGAGTTCGAATCATTCGGCGACGCCGATGTTGTTGACCCCACCCGGGGTTCCCCCGCATCACGCGATTAGTTTGCAAAGTCAACAAGATCACCAACAGCAGCAGCATCAGATGAAAAAATCTTCGGTTAGTCCGCATTTGGGGATGGGACCAACTCCTGGGGGGGTTGTTCcaaatcaacaacaacaacaaccacATGGAGTTGCGATGAGGTCGTTACATCAACACATTTCGCCTAGTGTCTACGAGATGGCGGCGTTGACGCAAGATTTGGATACTCAAGTGATTACGACGAAAATTAAGGAGGCTTTGTTGGCGAATAATATTGGACAGAAGatttttggtGAAGCCGTCCTCGGTTTATCTCAAGGCTCAGTCAGCGAACTCCTTTCAAAACCAAAACCTTGGCACATGTTGAGTATAAAAGGTCGCGAGCCGTTCATCAGAATGCAGCTTTGGCTAAACGATGCTCACAACGTTGATCGTTTGCAAGCTTTGAAAAACGAACGTCGCGAAGCGAACAAACGCCGAAGAAGTTCCGGCCCCGGAACGCACGACAACAGCTCCGACACTTCCAGTAATGACACCTCAGAGTATTACCATTCAAATTCACCAGGCCCCGGACCTCCAGTTCCGAAGAAACAACGAGTTTTATTCACCGAGTATCAAAAGATCGCTTTAAACGTAgcttatgatttaaaaaattacccgAATCAATCTGACACCGATTTTCTCGCGATGGAGTTAGGATTACCAGATCGAACCGTTAGCAATTGGTTTCATAATCATCGGATGCGATTAAAACCAAGCGGAAATACAATCGATCGAGAACAAAGTCAAAATCAACCCGGTTTGGATCCGACACGAtttcgattattattaaataaaaaaatgcttGAATTAAGTCAAGAAAGAATCGGATTAGCTAATTTACCCATAGGTTATCCGTATTTAGCGTCAAATCCGAATATTGCAGCCGCTTTAATCAGTCGTGGATTACTTCCATCTGAATTAGATTTGAATTCGTTAAATAACGCGGTGAAAGAACAAATGTCCGGTTTAGATTTAACGATTTCTTCATCGGGGATTAAAAGGGAATCTCCGGATTTCGTTGAAGATGACGAAGAAATCATCAGCAACGCTTCCGAGGATTCAAATTTATCCGAAAACCATTTAAACTCAACtcaaaacaaagaaaattcgaATCGAACGTTGCCAAATCATCAAAACCCACATCAAAATCAACATCAAATTCACCATCATCACCACCACCACCAAAATAACCAAAGTCGATCGTCACGAAGAAAACCTGCAGCTCCACAATGGGTCAATCCAGATCAAAATCATCACCAAACGCACCATCAAAACGATGAAGTCATCATCAATGGGGTTTGCGTGATGCAAACTGATGATTTTTCGCGAAGAAATTCGTTAGAAACCGTTCGAATCGAACCCCAAGCTGTCGTTGATGGTTTTGACGTTGACGATCGAAGCGAAACATCCTCAGTGAGTCAAGAAAACGACCATCATCACAATCGCGATCACCGAGAAGGCGATCAAAGGCGATTAAGTGAAAGTTTAGCGGAGAAAAACGACGGGGATGATGTAAAAAATGAGAATGATGGTGTTGAAGGGGTCGTCGAGCGGGTTAAACAGGAACGGGACGACGAAGACGGTCACGAAGGGCTCGACGATAGTCGATGGGATTATTAA
Protein Sequence
MQPSASVSSPTEMDLQAMQSMSWLFKKENFFNLAQFYQHTAALKDKDIAELKGQVASLENKLEANMDRHSFESEITAKEKQFLLQISQLVEELQRKEATIAKLHEGFSKVPILEEQLDQKNQYIAKLEAKLESQKDYEDIKKELSILRLSTPTTTPSLENQKPLNLDNLKLEPVITKSPEPSLPEERKSPKTTPFPPHFQNVETFGTLLGEEIVANWKRSIETLSGKAVLSETETTEKSTASTPQPQEIIRQNSPIINGQNNPKSPEDNNNLSHNNNNNNIPILTSNVTVLANNFLKTEDLKSPFRFEDHQPQQQQHPQQQQRSFRFAEDMGLPPGSMVGRLGESLIPKGDPMEARLQEMLRFNMDKYASQNLDTLHISRKVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWSCDENAVLLLKSLIPKKDNFSTGKEIASYGGRQETGPREADFNDERIAHILNEASQIHGSKHNLQTTEDTHSNEDSKSPQGCSSPFSKDSSQNRKLKKYENDDISQEKVARIYQEEMAKLMGRRIEDFRTSRDAMFLPQIFAGGHLERSQEEMRALLDAYHQLAKMNSCGNQGGFGNFGLLALHQQALAQQNGGVQDLSLPKDKKINGDDQSKEDNNTKDDSNLPNSKVGSAFSLVKPKLETSSSTTSSPLGNTILPPIGGGGDVDFGTAASASPLQRMASITNSLISQPPSQPHPTTNQRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACNIKGNLNQNTKILTDATGILTQLSKDVQNPLLPPNFNHNLTNLAQNQLSNLTSNQLSNLSSNHSATPMLLTPPGVPPHHAISLQSQQDHQQQQHQMKKSSVSPHLGMGPTPGGVVPNQQQQQPHGVAMRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGTHDNSSDTSSNDTSEYYHSNSPGPGPPVPKKQRVLFTEYQKIALNVAYDLKNYPNQSDTDFLAMELGLPDRTVSNWFHNHRMRLKPSGNTIDREQSQNQPGLDPTRFRLLLNKKMLELSQERIGLANLPIGYPYLASNPNIAAALISRGLLPSELDLNSLNNAVKEQMSGLDLTISSSGIKRESPDFVEDDEEIISNASEDSNLSENHLNSTQNKENSNRTLPNHQNPHQNQHQIHHHHHHHQNNQSRSSRRKPAAPQWVNPDQNHHQTHHQNDEVIINGVCVMQTDDFSRRNSLETVRIEPQAVVDGFDVDDRSETSSVSQENDHHHNRDHREGDQRRLSESLAEKNDGDDVKNENDGVEGVVERVKQERDDEDGHEGLDDSRWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01097323;
90% Identity
iTF_01097216;
80% Identity
iTF_01098395;