Basic Information

Gene Symbol
ARID4B
Assembly
GCA_000648695.2
Location
NW:968169-977983[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.9e-28 2.3e-24 85.2 0.3 1 89 305 390 305 390 0.95

Sequence Information

Coding Sequence
ATGCAAGGAGACGATCCCCCGTATTTGTCCGAGGGGACCGCTGTTAGTGCTAAGTATAAAGGTGCATTCTGTGAGGCCAAAGTGAGCAAAGTTGTGCGATTGGTAAAATGCaagGTTACTTTTAAAATGGGTTTGGGAACAGCCACCGTTCACGACGATAACATTAAAGGAACGTTAAGAGTAGGACAAATCGTACAAGCTAAACACCcggaaaaaaaagaatttttcgaCGCTACAATCACTAAAGTACAAGATTGTAGTCAATACACCGTTGTCTTTGATGATGGCGACATCACAACGTTAAAAAGGACGGCACTTTGTCTGAAAAGTGGTCGACATTTTAACGAAAGTGAAACCCTGGATCAACTTCCGTTAACCCATCCCGAACATTTCGGGAATCCTGTCGTTGGAGGGCGGAGAGGGCGCAGAAATAGACAGCTTAATTGTTTCTTACAAAATTCATCATCTTTTAGGGAAGATAGTAGCGAAGGAGAACAAGAAGAAGATAATGAACCCGATCTTGAACTCTATACTGCAGATATTGGTCGTGTTGTTAGTGTGGAATCTAGTGAGAAAAAACGAAACAAAGATAATTGGTTTCCAGGACTTATTGTGATGCCTTCTGCTCAACCCACAGTTAAAATCAATATGAAGGATGAATTTTTAGTTCGATCTTTTAAAGATGGACGATAttACACAGTGCCTAAAAAAGAAGTAACCGAATTTACTAAAGAATTAGGTGCAAAAGTTGAAAATTCCATTTTGGCTGAAGCCGTtgaaaaagctttaaaatatttaaatgaagatTCTTTACCTGATCATTgggaaaaaagtattttgtttAATCCACAAAATCAATATACGGATTCAGAAGAAAATTTCACAGACAGTTCTGATGATGAACCACGTGAAGAAAAAGACCATTTCGTAGCccaactttataaatttatggatGATAGTGGAACCCCTTTAAATAAAAGCCCAATGATTGGGAGTAAAGATGTTGATCTTTACAGACTCTTCCGCGTTGTTCACAAAATTGGTGGTTACAATAGGgttacaaatcaaaataaatggCGAACAGTTGGGTTACGCTTAAAGTATTCCAACAACCAAAACACATTTAATCAAGTTAAAGCAGtctacaaaaaatgtttgtactCATATGAGTCCTTTTATCGAACTTTAGGTTGTACGATGTCCGATCATACGAGAAGTTCCAAAAAGAATAGAGGTCGACCTTTAATACGGGATAAAGATCGTGTTACCCCCGTTCAAAGCCCTCGACCTGATAGCgtaaaagaagaaatcgaagagaaaaaggaagaaattgatgaaaaagacaaagataataacaaattaaaagtaaagaaagaggagaaaaagaaaaatagtgAAAGTAGCGATCAGAGTATCAGCGAAAATATAGAAATACGTCATTCTCCAATAGAACCGGTTGTTGCAAGTACTTCTAAGGAGGTCGTTAAGGTTAAAAAACCTGATACACCAAAACcaattaaagagaaaaagggaaaaattatcgaaaagattaaagaaaaagatgaGAAGAAAGAAAAGGAGAAAGAGAAGGAGAAGGAACGGGAAAAAGAGAAGGAAAAAGATGAGAAAAGCGATAAAGAAGAAAGGACTCAGCAGAGTACAAGAACGAAATTTCCTTCTTTGAAAGCTAAAGAAGCTATGACAccagaaagaaaaattaaggaGAAAATGCCTATGAGAGATGCTGCAGCTAAAAATATGGCTTTGAAAGCGATCAAAAAGGATGAAAGAAGAGGGAGAAAAAGGGTTAATTCTGAAGAAAAATCTTCACATGAAaatACAACTATTGAAACAATACCAACACCACTTGTAAACGTTGGCGATAAATTAATGGTTTATTATGGCCCTACACATGATTCAAAAGTAGCTACATATGAAGCAAAAGTGATAGAAATAGGTACTGATTCTCAAGGACCAATTTACATGGTACATTATACAGGTTGGAATACAAGATATGATGAATGGATCCCACCACAAAGAATTGCTGAAAATGTTAGCGTTTCAACTAAAGccaaaagaataaaacaaagttCAAATCTTATCTCTAAGtCTACAACATCTTTACCTAATTCATCATCAACTCCTACTACAAAATCGTTACCTAGTAAAAGAGGTAGAGGTACTTCTTTTACGGGTAAAACAACTACAGTGGAACCCACAAGATCAACAACTCCCTCAAGTGTAACATCATCATCGAGTAGAACAAAAAGTCCGGCAACTCCAGCTACAAGAAATCGAGTTAATACGCGACACGGAGAGTCTACGAGACGGACGAGGAGAACTTCTGTTCAAACTGATATTTCAATGCATTCTGATTCAGATTCGGAATCATCCGAATGTGACGGGGAGCAatctagaaataaaaatggtgGAAAAAGTGAAGATTGTGAGGTTAAAACTCCGAAAAAAcgattaataaaaactaaaCTCGAGAAACGTAAAGATGATGATGACACTGAAAAAGAAGACGAAGAAAAGCCCAAAAAACCACTAAGAAAACTCAAAAAAACACCAGAAGTAATAAAACCAAGTGATGAAAGCGACGAAGATAGCAGCAGTCATCCAAAAGGACgcgattttgatttaaatcagATTAGATCTGAACTGAAAGGttttaccaaaataaaaatgacagAAACTAGCGAAAAAGATACATCATCTGATGATTCAACCCCAACTTCTGAGGTTAAAGTTTTACCGGACGAATGTgatgataaaaaagaaaaaattgaaagtacTTCGAGTTCGGAAgatatttatgaatttaaagaACCGGAGCCGTTTGAATTTGAAAGTCCGAAAACTATCgatgaaaagaataaaaaaaggtttGTTCCGCGTGTTTTGGAGCCCGTTGAAAAATCACCAAGGAAAAAGAGCCCAAAATCGAAAGTCGAATCGAAAGAAgatgagaaaataaaaaaatttaggcGTACTCCTAAAAAGGACGAAGACgatgatgaagatgaagaaaaaattaaagatgaaccGGATCCTTTTGATAAATTGGTTGAGTCACCTTCGTTTCATATTGGGAAATCAACtgaaaaagttgaagaaaaaaaaattattcctaAAGTGCTCAATATGgatcttttatttaaagaacTTCCTTCGTCAATAGATGAATCTGATGAAAGATTAGATATTTCAGATGCTGAAGATACCAGTGAGCCATTGTTTTCAAATAAAGGGCAATTATTTGCTGGGTCATTTTCAAAACCATCGCCTAACCATGGTTCTGATCCTGAATGCACGGGATTTACAACAAAATCAGATGATAGAAAAACAAATACTagtgatgatgaagaaattattaaaacaacaatgaaaaatgtattagaaTTCGATAATGAtagtaatgatttattgagTCAACCatcagaagaagaagatgcaATTCAAAAAGATGAAACCATCACTTTGAATCGAGTAGAAAGTGAAGACGAAATGAAACCTGACGTTTTAGTCGAAACGGTGTGTACTCAAGAAAAATTGGCGTCATTATCAAGACAAATAGCACCAGTTTTCCAAGAAACGGACTCCGCTTTATTAAGAGATTTATAttctcaacaatttttaacaacaaaagttgatgaTGTAAAAGATATCAATTACAAAATTGGTACAAAAGTTGCCGAttctattttacaaaaattgaacaaaaatattaaagaggttaaaaaagatgaagaaataaaagaagaagttaAACCTATTCAGgaaattcaagaaattaaagaagatgaagaagaggaggacgaagaagaagaggaggaACAAATACCTCTTCCTGAAGTACCAAAATCTCCCGAACAACCTAAActagaaattaaaatgaaagaaaaaccGAAAGTTGATGTTCGTAAATCACCAAGAAAAGCAATCAGTAAAGAATTTATTGACGAATCTGACTCTGATAGTTCCGATTCGGAGGAAAGATTAATAATGGATGAAGATTCCCAAACTAGTTTATCCCAAGATataaacaaattcataaaagaCCAAGAAGAATCATCATCAAAACCCGAAACGGAAACGATCGAAACCGAacccaaatttaattttgacgtcaTCAAAGAAgaagttaaagaagaaaaaccaGAAGAATCTTGCAGCATAAAGGAAGAGGATGGCGATCCAGATGCTTTGTTGTATTGTGGCGAAACTTTACCAGGAAGTCCAGCTCCAGCACCATCTACagaaccaaaacaaaaaactaaaagtgaacTTCCGTTCGCTAGCGTTCCATGTAGTAGTAGCAGCAGTAACAGTAGCTGTAGTAGTTCTTCAAGTTcaactaataataaagttgttgCGGTTGAAAAGCCAGGAAGTAGTAATAATGTTATTGTTGGTGTGattaaagaaagaaatgttGAGAGGCCACCTCAAATTGTACTACCGGTTGTACCACCTGTTGAAATCCCTGAAATTAGGGATGCTGCTGCTGTACTAGATAATACTCCTCCAACTACACCTGAGAGTACAATTAGTAATTTATCGCCAAGAAGAGAAAACTGTGATTTATCACCAAACACTGCTGACAATGATAGTTGTAAATCAACGGAAGCCGAAGTTGAATCAAATAACCAAAGGAAAATTTCCACAAATAGTAAAGTTTCACCATTTAGTGAAGaagATACAATTATGAACAGTGAACAATGTGCTACTTCATCTAAAAAACGTGAAGATGTCGTAGCTGGATCCTGCAGAAAACGGCGAAGATCATGCAAAGGTGGAGATGACGTAGTTCTTCCTGTTAAACGAGGGCGGAAACCGCTTAATCGTTCTCGACATAATAGTGATAGTGATGATAATTCTGAGCACTCCGCTCAAGGAAATGGAAGTGGTGGGTCTTCGGGTAACGGTGATGGACGATTATCAAGGTCGCCAAAACCatcaaaatacaatttttgtgaaCCTCTCGATCCAAGTTTAGACTGTAGTCAAAGAATAGCGGTTCTTCAACAAAAATTGGCTGATGTCAGGAAAACTTATGCTGATATCAAAGCGGAATTGGCTACAATTGAACGAAGACGTAAAAGATTAAGAAGAAGGGAAAGAGaagcGGCAAAAGCAGCAAAACAAGAAGCAACCAACACGTGA
Protein Sequence
MQGDDPPYLSEGTAVSAKYKGAFCEAKVSKVVRLVKCKVTFKMGLGTATVHDDNIKGTLRVGQIVQAKHPEKKEFFDATITKVQDCSQYTVVFDDGDITTLKRTALCLKSGRHFNESETLDQLPLTHPEHFGNPVVGGRRGRRNRQLNCFLQNSSSFREDSSEGEQEEDNEPDLELYTADIGRVVSVESSEKKRNKDNWFPGLIVMPSAQPTVKINMKDEFLVRSFKDGRYYTVPKKEVTEFTKELGAKVENSILAEAVEKALKYLNEDSLPDHWEKSILFNPQNQYTDSEENFTDSSDDEPREEKDHFVAQLYKFMDDSGTPLNKSPMIGSKDVDLYRLFRVVHKIGGYNRVTNQNKWRTVGLRLKYSNNQNTFNQVKAVYKKCLYSYESFYRTLGCTMSDHTRSSKKNRGRPLIRDKDRVTPVQSPRPDSVKEEIEEKKEEIDEKDKDNNKLKVKKEEKKKNSESSDQSISENIEIRHSPIEPVVASTSKEVVKVKKPDTPKPIKEKKGKIIEKIKEKDEKKEKEKEKEKEREKEKEKDEKSDKEERTQQSTRTKFPSLKAKEAMTPERKIKEKMPMRDAAAKNMALKAIKKDERRGRKRVNSEEKSSHENTTIETIPTPLVNVGDKLMVYYGPTHDSKVATYEAKVIEIGTDSQGPIYMVHYTGWNTRYDEWIPPQRIAENVSVSTKAKRIKQSSNLISKSTTSLPNSSSTPTTKSLPSKRGRGTSFTGKTTTVEPTRSTTPSSVTSSSSRTKSPATPATRNRVNTRHGESTRRTRRTSVQTDISMHSDSDSESSECDGEQSRNKNGGKSEDCEVKTPKKRLIKTKLEKRKDDDDTEKEDEEKPKKPLRKLKKTPEVIKPSDESDEDSSSHPKGRDFDLNQIRSELKGFTKIKMTETSEKDTSSDDSTPTSEVKVLPDECDDKKEKIESTSSSEDIYEFKEPEPFEFESPKTIDEKNKKRFVPRVLEPVEKSPRKKSPKSKVESKEDEKIKKFRRTPKKDEDDDEDEEKIKDEPDPFDKLVESPSFHIGKSTEKVEEKKIIPKVLNMDLLFKELPSSIDESDERLDISDAEDTSEPLFSNKGQLFAGSFSKPSPNHGSDPECTGFTTKSDDRKTNTSDDEEIIKTTMKNVLEFDNDSNDLLSQPSEEEDAIQKDETITLNRVESEDEMKPDVLVETVCTQEKLASLSRQIAPVFQETDSALLRDLYSQQFLTTKVDDVKDINYKIGTKVADSILQKLNKNIKEVKKDEEIKEEVKPIQEIQEIKEDEEEEDEEEEEEQIPLPEVPKSPEQPKLEIKMKEKPKVDVRKSPRKAISKEFIDESDSDSSDSEERLIMDEDSQTSLSQDINKFIKDQEESSSKPETETIETEPKFNFDVIKEEVKEEKPEESCSIKEEDGDPDALLYCGETLPGSPAPAPSTEPKQKTKSELPFASVPCSSSSSNSSCSSSSSSTNNKVVAVEKPGSSNNVIVGVIKERNVERPPQIVLPVVPPVEIPEIRDAAAVLDNTPPTTPESTISNLSPRRENCDLSPNTADNDSCKSTEAEVESNNQRKISTNSKVSPFSEEDTIMNSEQCATSSKKREDVVAGSCRKRRRSCKGGDDVVLPVKRGRKPLNRSRHNSDSDDNSEHSAQGNGSGGSSGNGDGRLSRSPKPSKYNFCEPLDPSLDCSQRIAVLQQKLADVRKTYADIKAELATIERRRKRLRRREREAAKAAKQEATNT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01097209;
90% Identity
iTF_01097209;
80% Identity
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