Osag006197.1
Basic Information
- Insect
- Onthophagus sagittarius
- Gene Symbol
- nfxl1
- Assembly
- GCA_036711965.1
- Location
- JASERS010000001.1:90901730-90918505[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 4 5.1e+04 -6.8 5.6 15 19 162 166 161 166 0.81 2 6 0.14 1.8e+03 0.6 0.5 4 10 197 203 196 205 0.93 3 6 1.4e-07 0.0018 19.7 16.4 1 19 211 228 211 228 0.99 4 6 1.7e-10 2.2e-06 29.0 13.9 1 19 264 282 264 282 0.99 5 6 2.6e-08 0.00033 22.1 11.1 1 18 317 334 317 335 0.97 6 6 0.23 3e+03 -0.2 10.0 1 16 370 385 359 386 0.85
Sequence Information
- Coding Sequence
- ATGGGCGATGTTAAGTGGAAATCATCTAAACAACGGGGGCCGTGGACCCAAAATCAGGGGAAAAGACCGGGGGATAatcataacctaaaaaaatcggAAATAAAGTTTAAAGAGGCGACGACCAAATTTCAAGCTGCGGCTGAGAAATACGCGAAAGATTACGATTCTTCGTCTGAAGAGGAAGATTTGGAGTCGAAAAATATCATtgATGGCATCTTTAAATTTTATGCACAAAAAGGAGAAGAAATTGGAAATTTGGGGAGGACTAAAGGATATGTTGAAGATTCGTTTGTGTCGGGGGCAATTACGTGTCTTATTTGTATATCGAGTGTGAAACGAAATGATGagatTTGGAATTGTACCGAATGTTACTGTTCATTTCATCTCCAATGCATTCAACGTTGGTCAAAAGACAGTATCGTCCAAAAGAAAAACGTTTTGGAAGGGCAAATAAtaacgaaacaaataaaattagtaTGGTGTTGCCCAAAATGTCGCCGAGAATATCTCCCAGAAGACACCCCAACACAATACACGTGTTTTTGCACGAAAACGATCAACCCCAAATTCCAATCACTTCTAATTCCACATTCGTGCGGGGAAAAATGCGGAAAACAACTCAAACCGATTTGCGGGCACGACTGTTTATTATTGTGCCACCCAGGACCATGTCCACCTTGTCCCATGACAATCTCGTCCAAGTGTTATTGCGGATCAACTCCCCCAAAATTACAAAGATGCTGTAATAAGGAATGGTCTTGTGGATCAAAATGCAACAAATTATTAACATGCGGTAAACATAAATGTTCGGAATTATGCCACGCGGGTGATTGTAAGCCGTGCCCGaaaaaaagtatacaaaaaTGTCTTTGCGGGGCGTCGCAAAAATTACGGGATTGTTCGACTCCGATTTGGCAATGCGAGTTATTTTGTAATAAACCGTTAAGTTGCGGGTTTCATACTTGCCCGGAGGTGTGTCATATTGGGGATTGTGGCGAGTGCGAATTGTCGAAAGTTAGGACATGCCCTTGTGGAAAATCGAGTTATAATTTACCATGTACTGAGGAAACTCCTACTTGTGAAGATACTTGCGGGAAATTGTTGGAATGCGAGcaacatttttgtaattataaatGTCATAAAGATAAATGTGGATCGAGGCCGGGGAAAATTGCTAACAGACATCTGACCTGGGATATTGGCCAGCCAGATAGTGTGGCGTGTATCTTCAGTTGA
- Protein Sequence
- MGDVKWKSSKQRGPWTQNQGKRPGDNHNLKKSEIKFKEATTKFQAAAEKYAKDYDSSSEEEDLESKNIIDGIFKFYAQKGEEIGNLGRTKGYVEDSFVSGAITCLICISSVKRNDEIWNCTECYCSFHLQCIQRWSKDSIVQKKNVLEGQIITKQIKLVWCCPKCRREYLPEDTPTQYTCFCTKTINPKFQSLLIPHSCGEKCGKQLKPICGHDCLLLCHPGPCPPCPMTISSKCYCGSTPPKLQRCCNKEWSCGSKCNKLLTCGKHKCSELCHAGDCKPCPKKSIQKCLCGASQKLRDCSTPIWQCELFCNKPLSCGFHTCPEVCHIGDCGECELSKVRTCPCGKSSYNLPCTEETPTCEDTCGKLLECEQHFCNYKCHKDKCGSRPGKIANRHLTWDIGQPDSVACIFS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -