Basic Information

Insect: Onthophagus sagittarius
Gene Symbol: -
Assembly: GCA_036711965.1
Location: JASERS010000005.1:9299437-9300644[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.00065 0.081 14.9 1.3 1 23 86 110 86 110 0.94

2 7 4.5e-06 0.00056 21.7 0.1 1 23 116 140 116 140 0.96

3 7 2e-07 2.4e-05 25.9 2.5 1 23 146 168 146 168 0.99

4 7 0.00069 0.085 14.8 0.5 1 23 174 198 174 198 0.98

5 7 5.3e-07 6.6e-05 24.6 0.5 1 23 204 228 204 228 0.98

6 7 3.3e-05 0.0041 18.9 0.3 1 23 234 258 234 258 0.97

7 7 9.6e-06 0.0012 20.6 2.5 1 23 264 287 264 287 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.00065	0.081	14.9	1.3	1	23	86	110	86	110	0.94
2	7	4.5e-06	0.00056	21.7	0.1	1	23	116	140	116	140	0.96
3	7	2e-07	2.4e-05	25.9	2.5	1	23	146	168	146	168	0.99
4	7	0.00069	0.085	14.8	0.5	1	23	174	198	174	198	0.98
5	7	5.3e-07	6.6e-05	24.6	0.5	1	23	204	228	204	228	0.98
6	7	3.3e-05	0.0041	18.9	0.3	1	23	234	258	234	258	0.97
7	7	9.6e-06	0.0012	20.6	2.5	1	23	264	287	264	287	0.96

Sequence Information

Coding Sequence: atgtCCCGTTTTACattaaaggaAAATTTAGAAGTGAATCAAGAAATTCTTGAAGAACCTAACACTGTAACCATTCCTGAAGTAAACGCAGTGGAAAATTCAGAGGAAGTTTTAAATGAAGATGAATATCAAGAAATTAGATTTGAAGATGGCATAAGAGCTATAATTGATAAAAAGTTATGGATGAGCCTAATGGAAAATAATGGTGTTAAAGAGGTCCAAGAGGAGGAAGAATCTGAGAAAAAAACGAAGAAGTATCCTTGTGTGTACACTGGCTGCAACAAAGTTTATAGCAGCTTGCAACATTTAATGgtgCACTTTAGAAATCATACAGGAGATCGTCCATATGTGTGTTTAGTGGAAGGATGTGATAAATCATTCGCAACGGGTTACTCCTTGAAAGCTCATTTAAGAACTCATACAGGAGAAACACCTTATTCTTGTCAAACATgtacaaaacaattcaaaacatCAGGAGATTTAcaaaaacatattagaactcaTACAGGTGAAAAACCTTTTAAGTGTCCAATAGAAGGTTGCAATCGATCCTTTACCACTTCAAATATTCGTAAAGTTCACATTCGTTCACACACAGGCGAAAGGCCATATGTTTGCCAAAAAGAAAAGTGTGGAAAAGCTTTTGCTTCAGCaactaattataaaaatcatatGAGGATACACTCGGGTGAAAAACCATACGTTTGTCCTGTTGCTGATTGCAACAAACGTTTCACAGAGTACTCCTCGCTTTACAAACACAATATGGTTCATAAGCCTTTTAAGCCCTTTAAATGTGAGTATTGTGGGCAAAGGTGCAAACAAGAATCGACGTTAAAAGCGCACAAAAGGGCCGCACATGGTTTGCTTATAACGCAGGATGGAACAGAGATTGAAATTATACTTAATgataattatcaaaataattattaa
Protein Sequence: MSRFTLKENLEVNQEILEEPNTVTIPEVNAVENSEEVLNEDEYQEIRFEDGIRAIIDKKLWMSLMENNGVKEVQEEEESEKKTKKYPCVYTGCNKVYSSLQHLMVHFRNHTGDRPYVCLVEGCDKSFATGYSLKAHLRTHTGETPYSCQTCTKQFKTSGDLQKHIRTHTGEKPFKCPIEGCNRSFTTSNIRKVHIRSHTGERPYVCQKEKCGKAFASATNYKNHMRIHSGEKPYVCPVADCNKRFTEYSSLYKHNMVHKPFKPFKCEYCGQRCKQESTLKAHKRAAHGLLITQDGTEIEIILNDNYQNNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01098713;
90% Identity: iTF_01098713;
80% Identity: -