Basic Information

Insect: Onthophagus sagittarius
Gene Symbol: -
Assembly: GCA_036711965.1
Location: JASERS010000006.1:12253817-12255669[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00047 0.058 15.3 0.1 1 23 175 197 175 197 0.99

2 12 1.3e-05 0.0016 20.2 1.5 1 23 203 225 203 225 0.98

3 12 5.4e-06 0.00067 21.4 0.7 1 23 242 265 242 265 0.96

4 12 1.1e-07 1.4e-05 26.7 0.7 1 23 276 298 276 298 0.99

5 12 5.8e-06 0.00072 21.3 1.0 2 23 305 326 304 326 0.95

6 12 6.2e-08 7.7e-06 27.5 4.6 1 23 332 354 332 354 0.98

7 12 2.8e-06 0.00035 22.3 3.2 1 23 360 382 360 382 0.98

8 12 6.5e-05 0.008 18.0 3.7 1 23 388 410 388 410 0.97

9 12 7.8e-05 0.0096 17.8 4.3 1 23 416 438 416 438 0.98

10 12 1.5e-05 0.0019 20.0 1.2 1 23 444 466 444 466 0.98

11 12 0.00016 0.02 16.8 4.5 1 23 472 494 472 494 0.99

12 12 1.6e-05 0.002 19.9 2.2 1 23 500 523 500 523 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00047	0.058	15.3	0.1	1	23	175	197	175	197	0.99
2	12	1.3e-05	0.0016	20.2	1.5	1	23	203	225	203	225	0.98
3	12	5.4e-06	0.00067	21.4	0.7	1	23	242	265	242	265	0.96
4	12	1.1e-07	1.4e-05	26.7	0.7	1	23	276	298	276	298	0.99
5	12	5.8e-06	0.00072	21.3	1.0	2	23	305	326	304	326	0.95
6	12	6.2e-08	7.7e-06	27.5	4.6	1	23	332	354	332	354	0.98
7	12	2.8e-06	0.00035	22.3	3.2	1	23	360	382	360	382	0.98
8	12	6.5e-05	0.008	18.0	3.7	1	23	388	410	388	410	0.97
9	12	7.8e-05	0.0096	17.8	4.3	1	23	416	438	416	438	0.98
10	12	1.5e-05	0.0019	20.0	1.2	1	23	444	466	444	466	0.98
11	12	0.00016	0.02	16.8	4.5	1	23	472	494	472	494	0.99
12	12	1.6e-05	0.002	19.9	2.2	1	23	500	523	500	523	0.97

Sequence Information

Coding Sequence: aTGAAGTTTGATAAGATTTGTAGGGTATGTTTAATAGAAAAAACTGCTCTCAAACCCATTTTTAACGCTTGCATACCAAACATGTTGATGAGTTGTGCTGCAATTCagGTAATCGAAGGAGACGGTTTGCCCCACCAAATATGCACTCAATGTTTACAAACTGTGAATCGTTCCTATACGTTTAAAACCCAGTGTGAAAAGTCCGATGGTATTCTAAGACAATACATCAATATTATCCCTTTGGAAACCACTCAAAGTATTATATCCGACGATAAAAACGACCACATATTTAGTTCTAGCGAAGTTTTACAACAAagttcgatttttaatgatatttttgatGACGCCGAAACACACTCATTAGTCGATAATTTCACATCCCAAAATTCcgATCTTGCCGAAACCATGCAAAGTTTACGTACAATTGCTGAACAGTGTTTACCAGCGACTTGGGAAAATGAACAAAATTTATCGACAGAAAATGTAACAACAACTTGTGATGGTTTCAATTTAGAACAATTATATAAGTGCCAATTTTgtgaagaaatatttaaagatgAATGGAGTTTAGGTGAGCACATAAAAATTCATACAGGCCAAGCTAAATATTACTGTGAAATGTGCGGTAAAGAATGCAACACCCCCTCAGCGTTAGAAAACCATTTACATGTGCATACATTAGATAGAACCATTGATAGGGTagtagaaaagaagaaaataagtTACACATGTAATttatgtGGCAAAGAATTTCCTGatgttaaaacattaaaaagacATTACAGGGATGAGCACacagaagaaaacaatttattagaGCGAAAATACGTTTGTAGCATTTGTGGAAAAcgttataaacaaaataaactcttAATAATCCATATGAGATCACACACCGGTGAACGACCCCTTAACTGTGAAATTTGCGGCAAAAGCTTCTCATTACCTAGCTCTTTACATAAACACAAATTAATCCACAACGAAATTAAAAAGCATAAATGTAATTTATGCGGGAAatcgtttcatcaaaattctaACTTAAACGCTCATATCCGTACTCATACAGGAGAAAAACCCTTCGTTTGTAACATATGTGATAAAAGATGCTCGACAAATGTTCATTTAGAAATCCATTTGCGCTCTCATACGGGATTAAAACCGTATCAATGCTTAAAATGCGATTGTGCCTTCACCactcAAGGACAATTAAAAAAGCATAACTTACGCCACACTGGTGAACTTCCTTATAAATGTTGGCATTGTGGGAAATCTTTTCGCCAAAAAGATACCCGCgatacacatgttagatatcaCACTGGGGATAGACCATACGCTTGCTCTTTTTGTCCAAAAAAGTATATCGCAGCAAGTCATTTACGGGTTCATATGAAAACCCATACAGGGTTGCGAAAATTTCAGTGTAACATTTGTTGCAAATCGTTTACAGAATCGAAAACGTTGAAAACCCACATTATGACTCACACCGGGCAGAAGAGGTTTCATTGCAACGTTTGCGGAAAGGGGTTCATTCAACAAGGAGCTTTTAATGTGCACATTAGAAACTGTCATATTTAA
Protein Sequence: MKFDKICRVCLIEKTALKPIFNACIPNMLMSCAAIQVIEGDGLPHQICTQCLQTVNRSYTFKTQCEKSDGILRQYINIIPLETTQSIISDDKNDHIFSSSEVLQQSSIFNDIFDDAETHSLVDNFTSQNSDLAETMQSLRTIAEQCLPATWENEQNLSTENVTTTCDGFNLEQLYKCQFCEEIFKDEWSLGEHIKIHTGQAKYYCEMCGKECNTPSALENHLHVHTLDRTIDRVVEKKKISYTCNLCGKEFPDVKTLKRHYRDEHTEENNLLERKYVCSICGKRYKQNKLLIIHMRSHTGERPLNCEICGKSFSLPSSLHKHKLIHNEIKKHKCNLCGKSFHQNSNLNAHIRTHTGEKPFVCNICDKRCSTNVHLEIHLRSHTGLKPYQCLKCDCAFTTQGQLKKHNLRHTGELPYKCWHCGKSFRQKDTRDTHVRYHTGDRPYACSFCPKKYIAASHLRVHMKTHTGLRKFQCNICCKSFTESKTLKTHIMTHTGQKRFHCNVCGKGFIQQGAFNVHIRNCHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01098673;
90% Identity: iTF_01098673;
80% Identity: -