Basic Information

Insect: Onthophagus sagittarius
Gene Symbol: su(Hw)
Assembly: GCA_036711965.1
Location: JASERS010000002.1:79644198-79654534[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 3.1e-05 0.0038 19.0 4.0 1 23 130 153 130 153 0.93

2 13 7e-06 0.00087 21.0 1.1 2 23 185 207 184 207 0.96

3 13 0.0078 0.96 11.5 1.5 1 23 213 235 213 235 0.97

4 13 0.00017 0.021 16.7 1.4 1 20 241 260 241 262 0.95

5 13 8.5e-07 0.00011 23.9 0.8 1 23 273 295 273 295 0.98

6 13 9e-05 0.011 17.6 0.2 1 23 305 327 305 327 0.98

7 13 1e-05 0.0012 20.6 0.3 1 23 333 355 333 355 0.98

8 13 3.7e-06 0.00046 21.9 1.3 1 23 361 383 361 383 0.99

9 13 4.1e-05 0.0051 18.6 4.6 1 23 389 411 389 411 0.95

10 13 4.6e-05 0.0058 18.5 2.3 1 23 417 440 417 440 0.95

11 13 7.8e-06 0.00097 20.9 2.8 2 23 447 468 446 468 0.96

12 13 4.4e-07 5.4e-05 24.8 0.9 1 23 474 496 474 496 0.99

13 13 9.3e-06 0.0011 20.7 3.1 2 23 503 525 502 525 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	3.1e-05	0.0038	19.0	4.0	1	23	130	153	130	153	0.93
2	13	7e-06	0.00087	21.0	1.1	2	23	185	207	184	207	0.96
3	13	0.0078	0.96	11.5	1.5	1	23	213	235	213	235	0.97
4	13	0.00017	0.021	16.7	1.4	1	20	241	260	241	262	0.95
5	13	8.5e-07	0.00011	23.9	0.8	1	23	273	295	273	295	0.98
6	13	9e-05	0.011	17.6	0.2	1	23	305	327	305	327	0.98
7	13	1e-05	0.0012	20.6	0.3	1	23	333	355	333	355	0.98
8	13	3.7e-06	0.00046	21.9	1.3	1	23	361	383	361	383	0.99
9	13	4.1e-05	0.0051	18.6	4.6	1	23	389	411	389	411	0.95
10	13	4.6e-05	0.0058	18.5	2.3	1	23	417	440	417	440	0.95
11	13	7.8e-06	0.00097	20.9	2.8	2	23	447	468	446	468	0.96
12	13	4.4e-07	5.4e-05	24.8	0.9	1	23	474	496	474	496	0.99
13	13	9.3e-06	0.0011	20.7	3.1	2	23	503	525	502	525	0.94

Sequence Information

Coding Sequence: ATGGATGATCAACAAGCGTTCATAAAAGCCGAAGAGGAAAGCATCGTTTTCGAAACTAACGAAGAGCTCACCGTCGTTCCCTTACTTTCGGACGTTCCCGATATCATTTCGGCTATCGAGGTCACCACCGACACGGACGGTAATTTTAAAATAAGCACAATCGAGCAAAATACCGATTCGGTCGATGATGAACCAAGGGAAATTGCTTTAGAAATCGAAGCTGAGGAATACGACGAAAGTCAAAACATCGACTACACCCTTGAAGAACAAGAAGTCGAGCAAGAAGAGGATGAAGATCAAAACGAGGTTGAGGAAATGGAAGAGGACGCTGATGATCCCGATTATGAGTATCCGTATGATAATAAGGAAAAGGAAATGGATGAGTATCATGCTTGTGAATATTGTGATAGATGTTTTAAAACTGCAACGAGTTTGAAAAGGCACGTAACTGTGACTCATAGCGAAGAGAGGCCTAGCGATGACCCATTGGCCTTTGAATTATGTTATTGTTGCGGAGAACCCGTCGATTCAGCCCATATGACCGGTGATATAACATGTCCAAATTGCGATAAACGTTTTgtgtttgaagaaaatttaagtcGCCATATGTGTATCGATCATAACAAAGGTGATTTATACAATTGCAGCGAATGTAAATTGCAATGCAACACcaaacaagaattaattgatCATATATCGGAGCATCCCCTATCGAAACCATTTTCTTGTAAAGCTTGTAATAAAGATTTTACGAGAAAGTATCATCTTGATCGTCATATCGCCCAAACCGGGTGCGATGGCGGCccgaaaaataattttcaatgtaACGTTTGTTACAAGGAATTCGCGCGGAAAGATAATTTAAGAGATCATTTAAGGGCTCACGCCGGACAAAccaaaaaaaagaaagttttcgTTTGTATGTACTGCGAAAAAGTGTTTCAAGGGAGCGGCTTATTATCAGTTCATTTAAGAACTCACACAGGCGAGCGTCCTTATGCGTGCGATTTATGCCCAAAACGATTTCCGTCTAGCGGCGCTATGAAAAAACATCGAAGAATGCACACCGGTGAAAAACCCTATGAATGTTCGAGGtgtcaaaaacgttttgcagcTAAAGAAACGTTAAATAGACACATTCGCACCCACACGGGAGATAAACCCCATTCATGTCACTTTTGCGGAAAAAGTTTTATACAAGCCGCGCAATTACGCGCACATATTTTCCACCACACCGGTGAAAACGCGTTTACTTGTCCGCATTGTAATCGCGCTTTTAACCGACGAGTTAGATTAACAACTCACATTCAATTCGTACATGAAGGAGCTCAACCAATGCAATGCGATCATTGCACTAAATCGTTTTATCGAAGAGAAGATTTACAACGTCACCTTTTATTACACACCGGTGTTAAACCGTTTCAATGTGaagtttgcaataaaaaatttgctgttaaatcatcattaaaattaCACATGTTGACTCATAGAAAAGAACCCCCTTGTAGTTGCGACGAGTGTGGACGCGCCTTTATAAGACAAGATTGCCTTTTAAGACATATGAGAGCTAAACATCGCGATGTTCTTGAAGATATTATGGCTGGAGCTGAAAAGAAACGTTTACAAGAACAATTATTGAATGTAGCCCAAGTGGTTGCGTCcggaaataatactttgacggtTCAACAAAGCACCATTTGGGATGAATTAACTTTAACTGATTCGATTAAAGAATTGTTAGGATTACTGGTGGATGAGAGTACATTGAAAGATTTTGGATGGCCGGATACGCCGGTTGATAAAATGTTGGATTCGGTTATAAGAAGATGTGGACATAAACCGGCTTCTaaagaagattttgattatatCGGGAGAATGAGAGAGAACGCTAAGCTTCTTTTTACTGTTGTTATTGATGATGATACCATTAAGAGTTTATTGAATAATCAAACTGTTGATGAAGTTATTTTACATGTTTTGCGTTTagctaaaaatgattaa
Protein Sequence: MDDQQAFIKAEEESIVFETNEELTVVPLLSDVPDIISAIEVTTDTDGNFKISTIEQNTDSVDDEPREIALEIEAEEYDESQNIDYTLEEQEVEQEEDEDQNEVEEMEEDADDPDYEYPYDNKEKEMDEYHACEYCDRCFKTATSLKRHVTVTHSEERPSDDPLAFELCYCCGEPVDSAHMTGDITCPNCDKRFVFEENLSRHMCIDHNKGDLYNCSECKLQCNTKQELIDHISEHPLSKPFSCKACNKDFTRKYHLDRHIAQTGCDGGPKNNFQCNVCYKEFARKDNLRDHLRAHAGQTKKKKVFVCMYCEKVFQGSGLLSVHLRTHTGERPYACDLCPKRFPSSGAMKKHRRMHTGEKPYECSRCQKRFAAKETLNRHIRTHTGDKPHSCHFCGKSFIQAAQLRAHIFHHTGENAFTCPHCNRAFNRRVRLTTHIQFVHEGAQPMQCDHCTKSFYRREDLQRHLLLHTGVKPFQCEVCNKKFAVKSSLKLHMLTHRKEPPCSCDECGRAFIRQDCLLRHMRAKHRDVLEDIMAGAEKKRLQEQLLNVAQVVASGNNTLTVQQSTIWDELTLTDSIKELLGLLVDESTLKDFGWPDTPVDKMLDSVIRRCGHKPASKEDFDYIGRMRENAKLLFTVVIDDDTIKSLLNNQTVDEVILHVLRLAKND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01098670;
90% Identity: iTF_01098670;
80% Identity: -