Basic Information

Insect: Onthophagus sagittarius
Gene Symbol: -
Assembly: GCA_036711965.1
Location: JASERS010000008.1:11497522-11515070[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.5e-05 0.0068 18.2 0.6 2 23 407 428 406 428 0.97

2 18 2e-05 0.0024 19.6 1.2 1 20 434 453 434 456 0.94

3 18 1.1e-05 0.0014 20.4 2.0 1 23 462 484 462 484 0.98

4 18 0.00096 0.12 14.3 4.0 1 21 490 510 490 512 0.95

5 18 8.9e-05 0.011 17.6 5.7 1 23 518 540 518 540 0.99

6 18 3.8e-05 0.0047 18.7 5.3 1 23 546 568 546 568 0.97

7 18 9.8e-06 0.0012 20.6 7.1 1 23 574 596 574 596 0.97

8 18 1.5e-07 1.8e-05 26.3 2.7 1 23 602 624 602 624 0.98

9 18 0.00011 0.014 17.3 6.7 1 23 630 652 630 652 0.97

10 18 1.3e-05 0.0015 20.3 5.6 1 23 658 680 658 680 0.97

11 18 7.1e-07 8.8e-05 24.2 2.8 1 23 686 708 686 708 0.98

12 18 3.3e-06 0.0004 22.1 6.1 1 23 714 736 714 736 0.98

13 18 4.3e-05 0.0053 18.6 9.1 1 23 742 764 742 764 0.98

14 18 2.6e-05 0.0032 19.3 7.7 1 23 770 792 770 792 0.98

15 18 1.7e-05 0.0021 19.9 7.1 1 23 798 820 798 820 0.97

16 18 0.00025 0.031 16.2 0.2 1 23 826 848 826 848 0.97

17 18 0.039 4.9 9.3 5.1 1 23 858 880 858 880 0.98

18 18 3.3e-07 4.1e-05 25.2 0.7 1 23 886 908 886 908 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.5e-05	0.0068	18.2	0.6	2	23	407	428	406	428	0.97
2	18	2e-05	0.0024	19.6	1.2	1	20	434	453	434	456	0.94
3	18	1.1e-05	0.0014	20.4	2.0	1	23	462	484	462	484	0.98
4	18	0.00096	0.12	14.3	4.0	1	21	490	510	490	512	0.95
5	18	8.9e-05	0.011	17.6	5.7	1	23	518	540	518	540	0.99
6	18	3.8e-05	0.0047	18.7	5.3	1	23	546	568	546	568	0.97
7	18	9.8e-06	0.0012	20.6	7.1	1	23	574	596	574	596	0.97
8	18	1.5e-07	1.8e-05	26.3	2.7	1	23	602	624	602	624	0.98
9	18	0.00011	0.014	17.3	6.7	1	23	630	652	630	652	0.97
10	18	1.3e-05	0.0015	20.3	5.6	1	23	658	680	658	680	0.97
11	18	7.1e-07	8.8e-05	24.2	2.8	1	23	686	708	686	708	0.98
12	18	3.3e-06	0.0004	22.1	6.1	1	23	714	736	714	736	0.98
13	18	4.3e-05	0.0053	18.6	9.1	1	23	742	764	742	764	0.98
14	18	2.6e-05	0.0032	19.3	7.7	1	23	770	792	770	792	0.98
15	18	1.7e-05	0.0021	19.9	7.1	1	23	798	820	798	820	0.97
16	18	0.00025	0.031	16.2	0.2	1	23	826	848	826	848	0.97
17	18	0.039	4.9	9.3	5.1	1	23	858	880	858	880	0.98
18	18	3.3e-07	4.1e-05	25.2	0.7	1	23	886	908	886	908	0.97

Sequence Information

Coding Sequence: ATGAACTCCGAGGCGCAAAACCCCATGAATGGGGCCCACAACGCCGCCAACGAACCCGAAGGGAACAGTCAGAGGCCTCCACCCCCAACTACAACAGTGCCTACAGACTTACGTGTAAATACCGCTTTGAGTGCAGTTACTTTAAGTAATGTCGCCAAGTATTGGGTACTCACGAATTTGTTACCGGGGCCAATTCCACAAGTTTATAGTCTTCCCGGAACCACCAGAACTgataatcaaggaaaagttaatcaggaTGGGATGATGGGTCAACACACAAACTTAATAAACGCCGATTCGCTTTTATTGCAACAACACCAACCCGTGAGCATAGCCACATCACAATCGATGAGCAATTTGTCGATCCCCACGAACGCTATGCACATAGACGCCCAATCGCAAGGACATCAAATGAATACTCATCAGCAGCAGCAGCAACAACAGCAACAATCGTCAGAACAACAGCAGTCTATGAATCAATCCCACCAACAAATGAACGGCCAACCCCCAGGACCTAACCCACCAGGATCCGGTATGGTTCAAGTACAGGTACAAAACAACAGTTTGGTCTCTGTTATAGAAGACAACAAAGACCACAAGGATCTGATTACGACTGAAATGCCTACAATAAACGATAACAACCAGTCGATGGGGCAACACCAACAGCAACAACATCAAAATCAACATCCGAACATGCAAATGCACCATTTACAAGTACAACAAgTTTTAGATAACGTTGTGCATACCGTCGAAAATAACCCGCAACAAAACAACACCGAAGAAATGCAAGACGGGATGATAATAAAAGACgaaaaaaacattcaaaattgcTCGAAATTTTTAGGAACCCAATTCGGTCTCCAAGACATTAAAGGCAGTTCGATGGACGTTAGAACGGCCGATGGGAGTATCGTTAAAATCGCCGGGATACAAGAACAAGATTTAGTGAAAACACTCGGGGTTGAAGTCGTCCAAAACATGTATAAAGTTAACGTCGAAgatattaatcaattattaGCTTATCACGAGGTTTTCGGAAAACTCCAAGGCGAAATTACAACCACCCCCACAACGGTCGTTCAACACAACGTTAATCTACAACAGGGCGGAAATAACAATATCGCTTTAGTTACACCAAAAACGTTGGTCGAAAATGATCAGGAACCGACTACCAGTAGCATCGCTACTGATAGTCCTCCAATTGTATCGGCAAGTCAGGTTTGCGATTTGTGTGGCAAGATGTTTCAATACaggTATCAACTGATAGTGCACAGACGTTACCACGCAGAACGCAAGCCATTTACTTGCCAAGTGTGCGGTAAAGCCTTCACGAACGCGGCGGAATTAACAAGGCACGGGAAATGCCACCTGGGCGGGAGTATGTTTACTTGCTCGGTGTGTTTCCATGTCTTCGCTAACTCCGCCAGTTTAGAGAGGCACATGAAACGGCACTCAACGGAAAAACCATACAATTGCACGATATGCTTAAAAGCGTTCGCCCGAAAGGAGCACTTAGAGAATCACACACGTTGTCACACCGGTGAAACCCCCTATCGTTGTCAGTTCTGTTCGAAAACGTTCACCCGAAAAGAGCACATGGTGAATCACGTGCGTAAGCACACCGGAGAAACGCCGCATCGATGCGAGATTTGTAAAAAGTCGTTTACGCGTAAGGAACATTATAATAATCACGTGATGTGGCACACCGGGGAGACCCCCCATCATTGTACGATTTGTGGCAAAAAGTATACTCGTCGAGAACATTTAGCTAATCATATGAGGTCGCATACGAATGACACCCCGTTTCGTTGTGAAATTTGCGGGAAAAGTTTTACTCGAAAAGAACACTTTACGAACCACATCATGTGGCATACCGGGGAAACTCCTCATCGATGCgatttttgttcaaaaacaTTTACACGAAAAGAGCATTTATTGAACCACGTGAGACAACACACGGGGGAGTCGCCCCATCGTTGCGGTTATTGTAGTAAAAGTTTTACGAGGAAAGAACATTTAATTAATCACGTGAGGCAACACACGGGCGAAACCCCATTTCGATGTAGTTATTGCCCGAAAGCTTTCACGCGGAAAGATCATTTGGTGAATCACGTGAGACAACACACGGGAGAGTCGCCACATAAATGCCCGATGTGCACTAAATCGTTTACAAggaaagaacatttaacgaatcACGTGAGACAACATACGGGGGAGTCGCCGCATCGTTGTCATTTTTGCTCCAAGTCGTTTACTCGGAAGGAACATTTAACTAATCACGTAAGAATCCATACTGGGGAATCCCCGCATCGATGCGAATTCTGCCAAAAAACTTTCACAagaaaagaacatttaacgaatcATTTGAGACAACACACCGGGGAGACCCCGCATTGTTGCAACGTTTGCTCGAAGCCTTTCACTCGAAAAGaacatttaattaatcatatgaGGTCGCACACCGGGGAGCGTCCGTTCGCTTGCGGGGAATGCGGGAAGAGTTTCCCGTTGAAAGGGAACTTATTGTTTCATCAACGATCCCACAATAAAGGCCCAACGGCGGATCGCCCGTTTCGATGCGATCTTTGCGACAAAGACTTTATGTGTAAAGGACATTTGGTGTCGCATCGCAGATCGCACAGCGGCGAGCGCCCCTTCGCCTGTTCGGAATGTGGGAAAACATTCGTTGAAAAAGGGAATATGATGCGCCATATGAGGAAGCACACGAACGAAATTAACGGACAAAATAATATCGGGGAAAATCCGGGGCAATCAGGGGTTAATGTGAGTCAAAATAACCCCCAAACGGGTAATAACCCCGTGGTTACTTCCGTTGCGAATTTACAAATACCGCAGGTGACCCAAACGATGGCTAATTCACAGGGACAACACAGCATGCCTATACATCCCCAAAATTCTCACCCCGTCGTTGTACCCACTGCGAATGGAAACGTTTTAGCGAGTTATTGA
Protein Sequence: MNSEAQNPMNGAHNAANEPEGNSQRPPPPTTTVPTDLRVNTALSAVTLSNVAKYWVLTNLLPGPIPQVYSLPGTTRTDNQGKVNQDGMMGQHTNLINADSLLLQQHQPVSIATSQSMSNLSIPTNAMHIDAQSQGHQMNTHQQQQQQQQQSSEQQQSMNQSHQQMNGQPPGPNPPGSGMVQVQVQNNSLVSVIEDNKDHKDLITTEMPTINDNNQSMGQHQQQQHQNQHPNMQMHHLQVQQVLDNVVHTVENNPQQNNTEEMQDGMIIKDEKNIQNCSKFLGTQFGLQDIKGSSMDVRTADGSIVKIAGIQEQDLVKTLGVEVVQNMYKVNVEDINQLLAYHEVFGKLQGEITTTPTTVVQHNVNLQQGGNNNIALVTPKTLVENDQEPTTSSIATDSPPIVSASQVCDLCGKMFQYRYQLIVHRRYHAERKPFTCQVCGKAFTNAAELTRHGKCHLGGSMFTCSVCFHVFANSASLERHMKRHSTEKPYNCTICLKAFARKEHLENHTRCHTGETPYRCQFCSKTFTRKEHMVNHVRKHTGETPHRCEICKKSFTRKEHYNNHVMWHTGETPHHCTICGKKYTRREHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGYCSKSFTRKEHLINHVRQHTGETPFRCSYCPKAFTRKDHLVNHVRQHTGESPHKCPMCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQKTFTRKEHLTNHLRQHTGETPHCCNVCSKPFTRKEHLINHMRSHTGERPFACGECGKSFPLKGNLLFHQRSHNKGPTADRPFRCDLCDKDFMCKGHLVSHRRSHSGERPFACSECGKTFVEKGNMMRHMRKHTNEINGQNNIGENPGQSGVNVSQNNPQTGNNPVVTSVANLQIPQVTQTMANSQGQHSMPIHPQNSHPVVVPTANGNVLASY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01098661;
90% Identity: iTF_01098661;
80% Identity: -