Osag015425.1
Basic Information
- Insect
- Onthophagus sagittarius
- Gene Symbol
- Zfx
- Assembly
- GCA_036711965.1
- Location
- JASERS010000003.1:33387824-33398518[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 26 0.028 3.5 9.7 0.2 1 23 22 45 22 45 0.97 2 26 0.0024 0.29 13.1 1.3 1 23 50 72 50 72 0.99 3 26 0.0015 0.19 13.7 1.0 1 23 81 103 81 103 0.98 4 26 0.00013 0.016 17.1 0.0 1 23 109 131 109 131 0.97 5 26 0.00039 0.048 15.6 0.8 1 23 137 159 137 159 0.96 6 26 4.1e-05 0.005 18.7 1.2 1 23 165 187 165 187 0.98 7 26 1.8 2.2e+02 4.1 0.2 3 13 195 205 193 207 0.88 8 26 0.012 1.5 10.9 0.6 2 20 217 235 216 238 0.92 9 26 7.3e-05 0.0091 17.8 4.5 3 23 245 265 244 265 0.97 10 26 0.0072 0.9 11.6 0.3 2 23 273 295 272 295 0.93 11 26 0.042 5.2 9.2 3.5 1 23 301 324 301 324 0.97 12 26 3.4 4.3e+02 3.1 7.4 1 23 329 351 329 351 0.97 13 26 0.001 0.13 14.2 0.2 3 23 362 382 360 382 0.98 14 26 8.1e-06 0.001 20.9 0.4 1 23 388 410 388 410 0.99 15 26 1.5e-05 0.0019 20.0 1.6 1 23 416 438 416 438 0.98 16 26 5.8e-06 0.00071 21.3 0.3 1 23 444 466 444 466 0.98 17 26 0.00019 0.023 16.6 1.3 3 22 474 493 472 493 0.94 18 26 0.00092 0.11 14.4 1.5 3 23 561 581 560 581 0.98 19 26 0.017 2.1 10.4 2.9 1 23 587 609 587 609 0.98 20 26 0.075 9.2 8.4 1.6 1 23 615 637 615 637 0.87 21 26 0.00032 0.04 15.8 2.4 1 23 643 666 643 666 0.98 22 26 0.0001 0.013 17.4 1.5 1 23 678 701 678 701 0.95 23 26 0.0023 0.28 13.2 1.0 3 23 712 732 711 732 0.98 24 26 7.9e-06 0.00098 20.9 0.6 1 23 738 760 738 760 0.98 25 26 5.4e-06 0.00067 21.4 0.4 1 23 766 788 766 788 0.98 26 26 0.039 4.8 9.3 0.2 1 21 794 814 794 815 0.94
Sequence Information
- Coding Sequence
- ATGCTTTCTTCAGATATAACTCTAAAAAAGCATATGATTGCGTGTCACCTCAAAGAACATCCGTTCAAATGCGATCAATGCGATAAAGGGTATTTATCAGAAGCCGCTTTagataatcataaaaaaacagCCCACGATGGAGTGGTTTATAAATGCGATCAATGCGAAAAAACATACAAATGGCCGCAAGCTTATAAAAATCACGTGAAAACACACGAAACAGGGTATATAAAGCCTGAACACGTCTGTATGATATGCTCTAAAATATTGGGATCGAAAAATTCTTTACAGGATCATTTACGTACTCATCAATCGATAAAACGTTATATGTGCGAAATTTGTGGAAAAGGAGTTACATCGTTAGAATCATTGAAAATTCACGAACGTGGTCATCGAGGAGAGAAACCTTTCGCTTGTAAACATTGTCCGAAAAAATTCGTATCAAACGCGTTACTTCGCCCTCACGAACGAATTCACACAAACGAAAAGCCTTACGTTTGCCAAACATGTAATAAAGCATTTAATCAATATGGATCTTACAAAATTCACACGAGAATTCACACGGGTGAAAGGCCATATGGTTGTCATCTTTGCGAGAAGCGATTTCCATCTCGAACAGCGAATCCCTTATCAccatcaaaagaaattaaatgttACGTCTGCAATGAAGGTTTTGAAAAAAGAGCAAAATTAAAAACGCACATGTGGAAACATAGACCAAAAAATCGATGTTGTGATGTATGTGGACGTAAATTTAAAAGCAATACCCTGTTGAACAACCATAAACGAACgcataattcacaaaaaaaaaccgTTCAATGTACACTTTgcgaaacaaaatttatatcaGAAAATAATATGAAACTACATATGACAGCGGTCCATCTTAAAGATTACCCCTTTAAATGCGATCAATGCGGTAAAGGTTATATGCAGCATCATGTTTTGGATAACCATAAGAAATCGGCTCATTTAGGGATTATTCATAAGTGTGATAAGTGCAATAGAGAATATAAATGCGTGTTTGCGTTTAGACAACATCTAAAAACGCATGAAGTGGGGTACACAAAAACGGAATACGGCTGTCcgaaatgttcaaaattattatcttcaaaaagaGCTTTAGAACGTCATATTGCTACTCACGAAGATTCAGCAAGATATGTATGTAAGTTTTGTGGAAAATCGTACGGTTCTGCAGCCTACCTAAAAATCCATGAACGCACGCATAAAGGAGAGAAACCTTTTACGTGTCAACATTGTCCGAAATCTTTTGTTTCAAACATATTGCTTAAAATGCACGAACGTATTCATACTAATGAAAGGCCGTATGTTTGTAAGATttgtaataaaacatttaatcaACTTGCACCGCTTACAATTCATACTAGAATCCATACAGGTGAGCGACCGTATGGTTGTCATCTTTGCGATCAACGATTTTCTTCCAGAACTAATTTGAACGTGCATTTAAAAaaGAAATCAAAGAAAATTGGTAAAAAGTGCGTACTGGCTCGAAaaagaaaagataataataatacttcgTACGATGACTCAACAATTCGATTAGGTGAAGTTATCATAAAAGATGAACCATTCGATATCGATTCCGATGGAATAATCATCCAAGATGAAATCACCAAGAAAGAAAATGACGAGAAAACATCTGAAGCGATCCTATGCGAAATTTGCGATCAAACATTTACCAACAACATCGAGTTCTGCTTACACACTATCACTCATAGTGAAGACGATAAATATCATTGTTATCTATGTAATTATAGGAGTGCTTCGAAATACAGCATCGAATCGCATATAAGAACCCACGATGGCACCGCTAAATATAAATGTGAAATATGCAACAAAGGTTTTGGAGTAAGCACGCATGCTTTAgaacataaatattttcatacCGGAGAGAAACCGTTTCAATGTGAAATATGCggaaaacattttatgttcTCCTGGTTCTTAGCGTCACATCGAAGATCCCAACATTGGGAAATAATAACGGGAATGCCATTAGTCAAATATGAttgtttaatttgtaataaacatTACACATCATCGACTGGATTAAAACGCCATCAAGCTAGTATTCATAATATGGGACAACGCGAAGCATCCCGTTTGTGCGATATTTGCGGTAAAAGTTTGTCtagtaaagaaaaattgaaatttcataGAAGAATTCATACCGGATTCAAACCGTACGCTTGCACGGTGTGTTCAAAAGCATttacaaaaaaagaacaattaaaagaaCACGAACGGGTGCACACCGGTGAAAAACCGTATATATGCAAATTTTGTGGAAAAGGATTTAGCCAAAGAAGTCCTTTAAGAATACATGAGCGTATACACACCGGCGAACGGCCATATAGTTGCAAAATATGTTTTAGGGGATTTGTTTCTAAAGGAGTCATGGACATTCACATGAAATCTTGTCAAGGACAGAGCCGGCAAAATTCTCGCAACACCAATAAAACATAG
- Protein Sequence
- MLSSDITLKKHMIACHLKEHPFKCDQCDKGYLSEAALDNHKKTAHDGVVYKCDQCEKTYKWPQAYKNHVKTHETGYIKPEHVCMICSKILGSKNSLQDHLRTHQSIKRYMCEICGKGVTSLESLKIHERGHRGEKPFACKHCPKKFVSNALLRPHERIHTNEKPYVCQTCNKAFNQYGSYKIHTRIHTGERPYGCHLCEKRFPSRTANPLSPSKEIKCYVCNEGFEKRAKLKTHMWKHRPKNRCCDVCGRKFKSNTLLNNHKRTHNSQKKTVQCTLCETKFISENNMKLHMTAVHLKDYPFKCDQCGKGYMQHHVLDNHKKSAHLGIIHKCDKCNREYKCVFAFRQHLKTHEVGYTKTEYGCPKCSKLLSSKRALERHIATHEDSARYVCKFCGKSYGSAAYLKIHERTHKGEKPFTCQHCPKSFVSNILLKMHERIHTNERPYVCKICNKTFNQLAPLTIHTRIHTGERPYGCHLCDQRFSSRTNLNVHLKKKSKKIGKKCVLARKRKDNNNTSYDDSTIRLGEVIIKDEPFDIDSDGIIIQDEITKKENDEKTSEAILCEICDQTFTNNIEFCLHTITHSEDDKYHCYLCNYRSASKYSIESHIRTHDGTAKYKCEICNKGFGVSTHALEHKYFHTGEKPFQCEICGKHFMFSWFLASHRRSQHWEIITGMPLVKYDCLICNKHYTSSTGLKRHQASIHNMGQREASRLCDICGKSLSSKEKLKFHRRIHTGFKPYACTVCSKAFTKKEQLKEHERVHTGEKPYICKFCGKGFSQRSPLRIHERIHTGERPYSCKICFRGFVSKGVMDIHMKSCQGQSRQNSRNTNKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -