Osag015285.1
Basic Information
- Insect
- Onthophagus sagittarius
- Gene Symbol
- -
- Assembly
- GCA_036711965.1
- Location
- JASERS010000003.1:31658453-31658833[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-13 4.6e-10 40.5 0.0 1 41 15 55 15 59 0.93 2 2 3.2 4.7e+03 -1.1 0.0 26 35 88 98 87 105 0.78
Sequence Information
- Coding Sequence
- atgCCGCGCACATATGTACGAAAAATTAGACGTTCTTCGTGGACAGAAGAGTCCATGAAAAGGGCGATAAAGGCTGTAAGAGAACAACAGTCTTCCATTAGGAGTGCCGCTAAAATGTTTGAGATTCCATATGGCACACTTCAGGATAGGCTAAGAGGTTGGTTTCAAGTAAAGAAAATTACATTGGGAAGAAAACCGGTGTTTTCCGAATATCAGGAGGAAGAAATTGTTAGTACAATATTAAacatgtcaaaattattttatggactCCCAACCCAAAGCATACATAGTTTAGTGTTTAAATATGCAGAGACAAATAGCATTGCACATCCTTTTAATGTGGATAAAGGAATGTCTGGAAAGATTGGCTGTATTCATTAA
- Protein Sequence
- MPRTYVRKIRRSSWTEESMKRAIKAVREQQSSIRSAAKMFEIPYGTLQDRLRGWFQVKKITLGRKPVFSEYQEEEIVSTILNMSKLFYGLPTQSIHSLVFKYAETNSIAHPFNVDKGMSGKIGCIH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -