Osag009575.1
Basic Information
- Insect
- Onthophagus sagittarius
- Gene Symbol
- retn
- Assembly
- GCA_036711965.1
- Location
- JASERS010000002.1:41848108-41862316[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.9e-17 5e-13 50.7 0.1 28 89 3 62 1 62 0.93
Sequence Information
- Coding Sequence
- ATGGCCAAACAAGTACTCGACTTATACGAACTTTACAACTTGGTGATAGCAAGAGGTGGACTCGTGGATGTCATCAACAAAAAGTTATGGCAAGAAATCATTAAAGGTCTTCATCTACCATCATCAATCACATCGGCTGCATTTACATTAAGAACACAaTACATGAAATATTTATACGCGTTCGAGTGTGAAAAACGACAGTTTAGTACGGCGGATGAACTTCAAACGGCTATTGATGGAAATAGGCGTGAAGGAAGACGCGGAAGTTATGTAAATTACAATCGTCCGAGTAATCGTtcaccaaatcatcaacaacaAATGAGTCCGATCTCGATGAATATCCATCAACAGCAACAATTAGCGGCAGCCAGAATGAGTTTAGGTTTGCATAATGGTCCGCATCATATCGCGCATCAATCGCCACCGTTGGTGCCTCAATTAAACGGAAATCCTTTACATCCCATGAACAATTCCGTTACAATGGAATTTCAACATCGCATGTTAGAATATATTCGAAATGTTGCCGCGGCATCATCGACCACCAACACTCCAAATACACACGGAAATAACGTTGTTGTTCCGACTACCACGGCTTTAACGAATGGGGCGCCCTTAAATCCCATTGCTGGACCATCAGGAATTGATTTATCAAAATGGTGGAGTTATtacaataacaacaataataatcaaAGTGCCGGGAATAATAATCAACAGCAAGCTCAGCCGCAACCACCATCTCAAGGAGTTGTTCCTGGTGTTTTAGCTGAACCGCAAAGGGAGGCTTTAAATTTATCAGCAACACCTGAACCTGACGaaaataatcatcaaagttCTGGCGGTAATGGTAATACTGGTAGTGGACCAAGTATTGTCGAACCGATTCCGGGGACTAGTGGAGGTGGTAAAGAGGAAGATGGTGATGATGGTCATGACCCGGACGAAGATTTTCAACCtaggaaatttattaaaatggaAAATGGAGCTCCCGTACCTGTTTTACCTATTAGCACgagtatttcaattcaaagTCGAGGAGATGGTCGTAATGGTGATAATTCCTTAGTGGTAACAATGCAAATAGCCGGAGTCGCTTACGAGGGCGTTTTATTCGCACAGAGGCCTTCGGGCGAGAACTCATCGACGGTCTcgtaa
- Protein Sequence
- MAKQVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYAFECEKRQFSTADELQTAIDGNRREGRRGSYVNYNRPSNRSPNHQQQMSPISMNIHQQQQLAAARMSLGLHNGPHHIAHQSPPLVPQLNGNPLHPMNNSVTMEFQHRMLEYIRNVAAASSTTNTPNTHGNNVVVPTTTALTNGAPLNPIAGPSGIDLSKWWSYYNNNNNNQSAGNNNQQQAQPQPPSQGVVPGVLAEPQREALNLSATPEPDENNHQSSGGNGNTGSGPSIVEPIPGTSGGGKEEDGDDGHDPDEDFQPRKFIKMENGAPVPVLPISTSISIQSRGDGRNGDNSLVVTMQIAGVAYEGVLFAQRPSGENSSTVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -