Basic Information

Gene Symbol
Kdm5
Assembly
GCA_036711965.1
Location
JASERS010000007.1:4367673-4407559[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1e-18 7.4e-15 56.6 0.0 26 89 2 62 1 62 0.94
2 3 7 5.1e+04 -4.1 0.0 50 65 838 852 835 867 0.62
3 3 2.3 1.7e+04 -2.3 0.0 33 84 1105 1155 1101 1155 0.65

Sequence Information

Coding Sequence
ATGGTTGAAAAGCGCGCCCTTGATTTATACACACTGCATAGAATAGTACACAGCGAAGGTGGATTCAATTCGGTTACAAAAGACAGGAAATGGTCGAAAGTGTCTAGCATGATGGGGTATCCGCAAGGGAAAAGTATTGGGGCTATTTTGAAAACGCATTATGAAAGATTGTTGTACCCTTATGAGGTGTTTTCTGAGgggaaaagtattaaaaatttgaaaaaagagCTTCCACCTGATATGAAGAATGATGATGATGAGGAGTATAAGCCCCATCGAATTGAGAGTAGGATGATGATTAATAAGAAGGGAGGATGTCGTAGGAGGGAGAAGAAGTTATCTGAAAGTGATATTAAACCAAAAACAGaggttaaaataaaagatgaaatAACCGACGATAACGGCGATGGTGATAACAATAAAGAACTGAAACGTCTTCAATTTTACGGAGCTGGTCCGAAAATGGCCGGTTACAATTTAGACAAAAAAGACGAGAAAGCTCGATCGAAATTAATTCACTACGATATGGATATAGACCCGTTGGCAAAGTATGTTTGTCATAACTGCAATCGCGGCGATTCCGAAGAGTACATGCTCCTTTGTGATGGTTGCGATGATAGCTATCATACATTCTGTTTAATGCCACCGTTGGTCGAAATCCCGAAAGGCGATTGGTGTTGTCCCAAATGCGTCGCTGAGGAAGTTTCCAAACCCACCGAAGCATTTGGATTCGAACAGGCCCAACGGGAATACAACCTGCAACAATTTGGTGAAATGGCTGATCAATTTAAAAGTGATTACTTCAACATGCCAGTACatCTTGTACCAACATCGATAGTCGAAAAAGAGTTTTGGCGCATTGTGTCTTCCATAGACGAGGATGTAACTGTTGAATATGGCGCGGATTTACATACAATGGATCATGGTTCGGGTTTTCCGACGAAGAACTCGTTGAACTTACTTCCTGGAGACCAAGAATACGCGTACTCTGGATGGAATTTGAATAATCTCCCAGTTTTGGAAGGTTCCGTTCTCGGGTATATAAACGCCGATATTTCGGGGATGAAAGTGCCGTGGATGTATGTAGGGATGTGTTTTGCGACGTTCTGCTGGCACAACGAAGACCATTGGAGTTATTCCATAAATTACCTTCATTGGGGCGAACCAAAGACTTGGTATGGAGTTCCCGGGTCGAAAGCTGAGATGTTTGAAGAAACAATGAAGTCCGCGGCCCCCGAATTATTCCAATCCCAACCCGATTTATTACACCAATTAGTGACAATTATGAATCCTAATATATTAATGAACGCTGGCGTTCCTGTTTATCGAACTGATCAACACGCTGGGGAATTTGTCATTACATTCCCAAGGGCTTATCACGCCGGTTTTAATCAAGGCTATAATTTCGCGGAGGCCGTCAATTTTGCCCCAGCCGATTGGGTTTGCATGGGACGAGAATGCGTGTTGCATTATTCGCAATTGAGGCGATTTTGCGTCTTTTCCCATGACGAATTAGTTTGTAAAATGGCTGCTAACCCAGATAAATTAGATATAACAGTTGCAGCTGCTACTTATCAAGACATGTTAAGGATGGTTGAAACTGAAAAGAAATTAAGGAAAAGTTTGTTAGATTGGgGTGTAACAAACGCTGAGCGAGAAGCATTCGAATTACTTCCTGATGATGAACGGCAATGCGATGTGTGCAAAACGACGTGTTTCATGTCAGCAATATCATGTTCGTGCAACACAAACGTTCTGGTTTGTCTTCGGCATTATTCCGAACTATGTAAGTGTTCTCCAAAAAGCCGAACTTTGCGTTATCGCTACACTTTAGACGAGCTCCTTCCGTTATTACGCAATTTAAAAACGAAAGCGGAATCGTTCGATCGTTGGGCGGATAAAGTAAAAGATGCTTTGGATAGAAACACACCAAAATCAATGCACTTAGACGAATTGCGACAACTGTTTCAAGAGGCACAAGGAAAGCACTTTCCAAAGTCCGACTTGATATTGACTTTAGCAAACGCGATCGAGGATGCGGAGAAATGCGCTAGCGTCATAAGGCAGTtagatttaaacaaaattcgTACTAGAAATTCGTATGACCATAAAAGTAAATTAACTTTGGAGGAGTTAACTTTGTTTTGCGACGAGATCGACAGTTTGGCGTGCATATTAGacgaagaaaaaattattaaagaacttttaaccaaaacttCGGAGTTTGAAAAAGAAAGCAAACGAATCTTAGCTTTACCGCTAAAAGAATGTTTGATGCAACAAGTGGAGGACTTGGTTAATAACAGCAACGATTTATGCATTGAATTGCCGTCTTTACAACCCATGCAAGATcgcttaaaaaaattgaagtggTTGTGTGAAGTACAAAGCACCCGCCACTTGGGGGATGTGGCCGACATTGacactttaaaaaaattggtacaATCTGGAAACGTTTTCCCATACGATAGCGTTATCTCCAACGTTTTATTAGAGCTACAAACGTTAATCACGGAAGCTGAAGAATGGGAACAGCGCGcccaagaattattaaaaaaaaccgGTTCTGACATCATCTCAGAAGCCgaacaattaataaaagaagCTTGCGAGATTGAAGTGTTTTTACCAACGGAAAATATCTTAATTGACAGCTTAAACAGCGCAAACGAATGGTTCAAGCAGCTTCAAGAAATGAATTCCCTTGAATTTTATCCGTATTTATGCTCGATTGAAGATTTGATCAAAAAAAGTAAAGGTTTTCAGTTCCAACTTGAAGAAGTAGAGCGCTTAAAATCGTTCGTCACTTCAGCTTTATCCTGGAAAGAGAAAACGAGTCGGATATTTTTACGAAAAAATTCAACAGGAAATCTTATGGACGCTTTATCACCAAAACTAAATTTCACCATAACGAAAGGAAGGAAACGCAAAGACGACGACGAATACATCTTATTAAGAGACAACATGGACCCAACCACGGTAGTTGCCAGATTTAAAGACGCggaagaaaaagaaatgattgGACTAAAAGCCCTACGAAAAGAAAACTCAGAAAAAAGCTTAGATAACCCTGACGCAACGTTTTGTATTTGCCAAAAAAGTTCGTTTGGCATCATGATGTCATGTGATTTATGTAAGGATTGGTTCCATTCTACTTGCGTTACATTACCAAAGATAGcaaacacaaaaattaaatctaatcTAACCACCGCCATGCTTCAAATTGGCCATAAAGACAGCAAATTTTTGTGCCCAAACTGTTTGAGAACGCGCCGACCCAAACTCGAATCGATTCTCAGTTTGTTAATGTCTTTACAAAAGTTACATACCAGATTACCTGAAGGTGAAGCTTTACAATGTTTGACCGAGCGCGCGATGAACTGGCAAGATCGCGCCAGACAATTATTACAGAGTGACGAACTCGAATCGGCATTAATGAAACTCAacggaatttttcaaaaatacaacGGCGAAAAATCCAAACAAAACGACAAAAATTCTTTGAATACAATTAATGGGATTATTCATTCCACTCCTGAAGATGTTACCGATGGTAGTGCCAGCCCGATCGGTAATTATTGTGGGAATATGTCCGATGATAGCGGTAAAGAAGACTCCGAAAATTGTCAAGACGAACATACATATTCAATGCATTTGGCGAGGAACTCAGAATCGGAATATATGATACGGTTAAGTGAAACTGTTAAAGAACAGTTGGAAGATTTAATGGTCGAAGGTGATTTATTAGAGGTTACTTTGGATGAATTACCACAACTATGGCAACTTGTTGTCGCCAGTAGAGACAACGATAAAGAATTAGTCCTCGTTGATTTTgatgTATCAAAATCACCACAACGTAAAGGTCGAAAACGTCGTTCTGAAAATGAATTAATACCAAATGGTAAAAAACCGACGGAtgtagtaaaaaaattaaaaccgcGACGTTCAAATTCAGCGAAAGAAGTATTAAAACCAAGTCGATCTGAAACCGGTGGCGCGGGAGGTGTTCGTGGTCGACGAAATTGTCGTCGTGGACAAGAACATTCGGACGACgatgaaattgaagataaatGCGCGGTGGAATCATGTTTACAACCGTCTGGCGAGGAAGTTGTCCAGTGGGTACAGTGTGACGGTGGTTGCGATTTGTGGTTTCATATGGCGTGTGTCGGGCTCTCGATTAAAGACATTAACGAGGACGAAGATTATATTTGTATAACGTGCTCGCAAGGTAGCGTCAAAAATGGACTCGTTAATTTAGATCATTTAACGCCGAGTTTAAGCTCGGTCGAACTTGATTTTGAAGATACCGTTATCAATCAACAACAAGCTTTATCTTGTTTGTCAGAAAGAAGTTAA
Protein Sequence
MVEKRALDLYTLHRIVHSEGGFNSVTKDRKWSKVSSMMGYPQGKSIGAILKTHYERLLYPYEVFSEGKSIKNLKKELPPDMKNDDDEEYKPHRIESRMMINKKGGCRRREKKLSESDIKPKTEVKIKDEITDDNGDGDNNKELKRLQFYGAGPKMAGYNLDKKDEKARSKLIHYDMDIDPLAKYVCHNCNRGDSEEYMLLCDGCDDSYHTFCLMPPLVEIPKGDWCCPKCVAEEVSKPTEAFGFEQAQREYNLQQFGEMADQFKSDYFNMPVHLVPTSIVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSLNLLPGDQEYAYSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEMFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWVCMGRECVLHYSQLRRFCVFSHDELVCKMAANPDKLDITVAAATYQDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCDVCKTTCFMSAISCSCNTNVLVCLRHYSELCKCSPKSRTLRYRYTLDELLPLLRNLKTKAESFDRWADKVKDALDRNTPKSMHLDELRQLFQEAQGKHFPKSDLILTLANAIEDAEKCASVIRQLDLNKIRTRNSYDHKSKLTLEELTLFCDEIDSLACILDEEKIIKELLTKTSEFEKESKRILALPLKECLMQQVEDLVNNSNDLCIELPSLQPMQDRLKKLKWLCEVQSTRHLGDVADIDTLKKLVQSGNVFPYDSVISNVLLELQTLITEAEEWEQRAQELLKKTGSDIISEAEQLIKEACEIEVFLPTENILIDSLNSANEWFKQLQEMNSLEFYPYLCSIEDLIKKSKGFQFQLEEVERLKSFVTSALSWKEKTSRIFLRKNSTGNLMDALSPKLNFTITKGRKRKDDDEYILLRDNMDPTTVVARFKDAEEKEMIGLKALRKENSEKSLDNPDATFCICQKSSFGIMMSCDLCKDWFHSTCVTLPKIANTKIKSNLTTAMLQIGHKDSKFLCPNCLRTRRPKLESILSLLMSLQKLHTRLPEGEALQCLTERAMNWQDRARQLLQSDELESALMKLNGIFQKYNGEKSKQNDKNSLNTINGIIHSTPEDVTDGSASPIGNYCGNMSDDSGKEDSENCQDEHTYSMHLARNSESEYMIRLSETVKEQLEDLMVEGDLLEVTLDELPQLWQLVVASRDNDKELVLVDFDVSKSPQRKGRKRRSENELIPNGKKPTDVVKKLKPRRSNSAKEVLKPSRSETGGAGGVRGRRNCRRGQEHSDDDEIEDKCAVESCLQPSGEEVVQWVQCDGGCDLWFHMACVGLSIKDINEDEDYICITCSQGSVKNGLVNLDHLTPSLSSVELDFEDTVINQQQALSCLSERS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01098277;
90% Identity
iTF_01098277;
80% Identity
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