Basic Information

Gene Symbol
Trerf1
Assembly
GCA_963969525.1
Location
OZ018387.1:36018261-36053519[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-13 1.8e-09 40.1 0.1 2 46 1662 1706 1661 1706 0.97

Sequence Information

Coding Sequence
ATGGATGATATTGGGTATTATCTAGCAGAGGCTAAACTAGCAAATGGGGACACATATATGTGCGAGGCGTGTGCTCCACCGATCAGTGACATCAATGCTAACTCAAAGCAGGGATCCTCAATTACTGAAATCATTAAAGCagttttaaaatctgaattgGCCATATTGTTTAGATCAGAGCTTCAAGAAACGTTGAGTGAATTAAAATCCGAAATACAGGATATTAAGGCTAGAGTAATTAACTTAGAAAATAATAGTGCTGGGAATCATGCtcaaaacaatataaatctGGACCCCAAGCATAATATTGAAGATGCAGTACTTGAGCTAGAAGAACGACACAGACGAGCTAACAATGTTATCGTTTTTAATTTGCCTGAAAACAGGGGTACATCGGAACAACGTACAGCAGCGGATATACaagcaataaaaaacattatcgATTCATCCATCCCGTTTGAACCTGTAAAATGGTTTAGATTGGATAGTGAATTCATCGACAACCGTTATATTGTTTATCGGACGGACCGCTCCGAAGTAAACAGCTCAAAATCCATCGGTGGAGGAGTACTAATTGGCGTTAGTAACAAGATTCCATCATGCCTGATCTTAACTAACAACACACTAGAGATAGTAATGGTAAAACTCAATTTTAGCAGTAAAACCCTAATCATTTGCTGCTGTTATATTCCACCTGGTTCATCCATCGAGGTCTACGAAAATCACGTGTCTGCCATTGAGGATGTGTTGTCTAACTATCCAACTAGCGACTTTATTCTAGTAGGTGATTTCAATTTACCTCACATTAAATGGGTGTTGGAGGAGGAGAGTACCGGACTTGTACCAACAAACTTAACTTCCGcttctgaaattttattttccgatGGAATTGGGGCTTTAGGCCTAAATCAATTTAACGCAATAACGAATTGCTCTGGTATAATGCTTGACCTTTGCTATGCTAATCTGAATGCGCTATTGGTCGAAAACTGTGAATCTATTATTCCTTGTGATAAATACCATCCCTCTTTTTGTGTTAAATATGatacatCCTCATCTGGGGTACCACAGGGCTCTCACATCGGACCTTTGTTGTTCTCCATATTTATTACTGACCTTTCCGATATTTTAAAGTGCCCTCATCTACTTTTCGCGGATGATCTCAAGTTGTACTATAAAGTTAAGACCGCCACTGATTGCCAGCAAATACAGGAGGATATCAATGCAGTACATGACTGGTGTTTGTTGAACGACatgcaattaaatataagtaaatgccAATTCATTTCATTCTCCAGAAATGATCCTGAGGATCCATCCGGAATAAAGCCACCAACTAAGGATGGGGTTGATAACGTCCGATATGGCTTTAACCAATTCGAAGATAATAGCACCATCCAATATATTAACCGTGTCCTCTGTATATTGTCTCGGGAGGTTTTGATGGTCATGTTAACAGGTACCTCCAAACAGCTGGGTCTTGAGGCCTTAGGTTTCCCAGGGGCTACCAACGAATGTCCATCATTTACTTGGCTGGTATCCCCGATGCTTGTGGAAGGTCTTGGCTTTGGGCCAGCCTGTGTTGCAAAGCGggcatttcttcttcttttagcTTCAGCTCCACTAATCCTTTTCCGAGATTTTAAAGTTGTAGAAGAGGTATCTGAAACAGAAGGGTTAACAGGGCTGTCAGCCCTCTTCAGAGTTCAAGtcTCTTCCACCGATGACAAAAAAATACAGGGATCAACAGCGGAAGTTGTCAAACTGACAGTGAAGAGGGCGAGGCCTAAAGCAGCGTCACCTAACCGTCAAGGGCCGCAACAATGCCAGGTGTGTGCAAAAGTTTTTGGAAACGCGTCAGCGCTGGCCAAGCATAAATTAACACACAGCGATGAGAGGAAGTACGTGTGCACGATGTGCGGGAAAGCGTTCAAACGGCAGGACCATCTAAATGGACACATGCTCACGCACAGAAACAAGAAGCCCTACGAGTGCAAAGCGGAAGGATGCGGGAAATCCTACTGCGACGCGCGTTCGTTGCGGAGGCACACGGAAAACCATCATAATTCCTCTTCTTCGGGTACCACCACGACCATGTCACCGGCCCAGGGGGCTGCTTCCGGTGACGCTGCTTCACCGCATGGTTCTAGCTGCATACAGTACGCCCCACCGCCCACCACCACGACCACTGGCAAGAGTCAGCTTCAACAGTTATTAGCGACAGAACCTGCAAagagcgGTAATGGTGGAAACAACGACGGCCTAACCAAACAGCAGTTGGATCTCATCCATCAGATCATGGAGCAGACACAGAGGCAATCACAAACGACGACGAAGACGCCAGCAAAGCCATCTACGAAGCCGGTTAGCAAAACGCCAGTTAAAGTTCAAAGGGTTTGGCCTCCAACAgctcaacaaaataatataaataaaggaaCATCCAGCCCGCAGAACAAAGTGACCAGCACCGCTTCCAGTACCACATCGTCCACGGCGAACAGCAACAAGAGCGAACCGAAGCCGGTGGAATGCAACCTCTGCCATCGGAAATTCAAAAACATCCCCGCCCTCAACGGCCACATGCGCCTCCACGGTGGCTACATAAAAAAGGATGCCGACAGCAAGAAGTGCGAGAAGAAGGACTCGAACGGCCCGCCCCTGCAGACGGCTAGCGTCAGCGTGCGCGCACTGATCGAGGAGAAGATCATCAACAAGAGGATCACGAATGCTCCGAccacgacgacgacgacgagtAGCGAAGAGCCGGCGACTTCCGCGCCTCCCCTGTTCCCATTAACCGTGCATTCCTCGACAACGACGGCGAGTGGTAACGAACACGATACGAAGGTGACGTCGTTCGTGGTGCCCGCTCCCCCTCAATCCACGGAAAAATCTCGAAGACATTCCGACGCCGAGGCCTTCACAATACCGAGGGCTCCTAGTTCGCAGCAGGAGGCAGAAGCACTAGCCGATTTAATTTTGAAGCGGGATAAGGTCGGTATTAAGAGGACCACCTCGGATCCGGGACAGTCTCAGACACAAACACAGTCGCAGTCACAATCACAGTCGCAACTTATTCAGTTCCAATCCGGCGATTCGTTCACATTGACGTATCCATCAGAAGATGGATATCTATCCCCCAGCTTACAAGATGAAGTCTTCACGCAGGTGCAGGACAGTATGTTGCTGCAAAGCGTAGATCCGCAGCAGCTGGCTTCTATACAATTCCAAGCTGATAGTCTCTTACAAGATCAAAGCGAGACACCACTGCATGATATCAGCATTGATGATTATGCTAGTTTACAGGATGCCTCGGTACAATCGCCAGCATACCAGTCTAGTCATTCGGTTAATCAGGAGTTGCAAGCTGTGCTGGATTCGCCACTTCCAGAAAGCTTAGCGGAATTCAGCACGTTTCATTCCACCAGTAATTTAGACATCCCATCACCGAACTACCAGACCCAGTCACCAGCTCAATACTCAGGTTCGCCGCACGCTTCTATTTCAACGCAATCACCGCTGCAATCGCCATTAATAAGGCACGACTCTCCGGGATTTGCGTACCCAACTCCACCAGCTAGTCATGAAGGTCAAAGCCCTTGTTTCGGACAAAACACATTACTTCCGATGGTCTCTCCTAAACAAAGTTCTGATTTTGGAACCGTGGTAAATAGAGACGTAGATGAGCCACCACAAGCTTCGTCACCGTTATCAGCAGCATTCTTTACATCAACGATGTCTAGTTCAGCGGCTGTTGAAGAGGCTTTAGAGGAGGTGCTTCCAGGGGAGAGCATAGCTGCTGATGAGCTATATCCTTCCTTAACTAATTCTCCACCACCGCAATCACCCTTATCTGTTGGATTAACTCCTGTACCGTCTCCCCTTTCCAATATTCCTACAACTTCAACAACGTCTTCGCCGCATCACCATAACACCCTGAACACAATTGCCTTTCCTCTATCTCCACATTTTACACTGCAATCGCAAATGCTGCCCAACTCCGATGATCCGTTGCTCTCCAGTAGTCCGAAAGACTTCGCGGCCAGAAAGAAGTTCGAGTTCAACGGGCTGCCCTTAAAGGTGATCAGCAGTAACGGCCTACTAGATTTAAACAATAGCAACCTAACGGGGATTCTTGTCGAGTCGAATGGGGAAATCAAGTTCATACAGACAGGCGGCGGTTCGTTTCAAGGCAAGAACATCCTGCTGACCGGCGCCGCTCCGTTGTTGACCTCACAGACCGTCAGCAAGGACGATGACGCCAAGAACAATCCCAAGGTTCAAAAGATCCTCAAGACCGTACAAAATGCCTTACCGAAAACCACATCGCAGGTGCAGCTTCTGCAAAGGCCTAATATCGCAGTGGATAGACATGATGATATTATCAACGATGTTTTTTTAAGTCCAACAacgatacCGGCTAGTCCGGTAAGGATTTCCCGGAAACGCCTTCGCTCGGAACCCCTGCAGCTACCTGTGCTGCATCAATCGCGGCTAAGGGCCACGAGAAGTAAACCCCAAGGATCTGCGCCTTACACCCCACTTCCGATCCTCAACCCCAATCGCCCGGGATCCGGATTGTACTTTTACCTAAAACAAAAAGATAATCACGATGAGCCTATAAGTTGGAGCAATGAATCGGTTCCAGAATCGGATTCGACGCCCCACATAAACGTAGGCCCACAGTTTCAGTGCCAAATACCCGCCTTTTCTCCGGCGTACAGCAGGATCAGTCAGGAGAGGACGCACGAGGATCTGCTCTGGGATCCAGGCATAGCCAACTGTACGGACAGTGAAGTTGACATGTACTTGGATTTCGCCTGCTGCGCAGCCGTCCCCGGTGGAGGGAGGAATCAAGAGTACGCCATGCACCTCCTGCAGATGTGTTCAGGGAATATACACGATGCTATGTTGAAGCTAATGCAGCCCACGCCTTCTCTTCCCTCGGAGCATCCGCTGTTGCGCTATCAATATTCTGATAGTGATAAATGGACGGCGGCGGAGACTGAGCTCTTCCATCAGGCATTGCACAAGTATGATAAAGATTTCTCCATTATTGCTCAAGAgATCGGGACGAAGACGGTGAAACAGTGCGTCCAGTTCTATTACATGTGGAAGAAGGTCTGTACAGACGAGTACAGAAAACTGAAGCAGACCAGAGAGAGGAGGTTAGGACAGAGCCGGAATTTGGACTTCGAGGAAGAGAAGCCCTATCCGGATGCCAAACTATTAGGGATTGCAGATGCAGGCTCTCCCATGCCAATACAGGAACACAGGAACTTCATATGCGAATTCCCCGAGTGTTCAGCTagTTTTAATTCAAGAGCCGCCCTCAACGGTCACATCCGGATCCACGGCGGCAGCGCGCGCAACTCCCCCACGCCGGCCCTGCTGCTGGAGCGAAGACAGTCGTCTTCGGCGACGGCGGCGGCCGCCCATCCCTTCTGCCACACGTCGGACTCGACCGAAGACTACCCCTGTAAGATATGCGGGAAggTGTTCACGAAGATCAAGAGCAGGAGCGCCCACATGAAATCCCACCGACCACCGGACGCCGACCCCATCAAGCGGCGGGAGAAGGAACCAGTCACCTCCACCACCTTCGATTCCATACCGAGCCCCTTCAGCACCTAG
Protein Sequence
MDDIGYYLAEAKLANGDTYMCEACAPPISDINANSKQGSSITEIIKAVLKSELAILFRSELQETLSELKSEIQDIKARVINLENNSAGNHAQNNINLDPKHNIEDAVLELEERHRRANNVIVFNLPENRGTSEQRTAADIQAIKNIIDSSIPFEPVKWFRLDSEFIDNRYIVYRTDRSEVNSSKSIGGGVLIGVSNKIPSCLILTNNTLEIVMVKLNFSSKTLIICCCYIPPGSSIEVYENHVSAIEDVLSNYPTSDFILVGDFNLPHIKWVLEEESTGLVPTNLTSASEILFSDGIGALGLNQFNAITNCSGIMLDLCYANLNALLVENCESIIPCDKYHPSFCVKYDTSSSGVPQGSHIGPLLFSIFITDLSDILKCPHLLFADDLKLYYKVKTATDCQQIQEDINAVHDWCLLNDMQLNISKCQFISFSRNDPEDPSGIKPPTKDGVDNVRYGFNQFEDNSTIQYINRVLCILSREVLMVMLTGTSKQLGLEALGFPGATNECPSFTWLVSPMLVEGLGFGPACVAKRAFLLLLASAPLILFRDFKVVEEVSETEGLTGLSALFRVQVSSTDDKKIQGSTAEVVKLTVKRARPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCTMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHNSSSSGTTTTMSPAQGAASGDAASPHGSSCIQYAPPPTTTTTGKSQLQQLLATEPAKSGNGGNNDGLTKQQLDLIHQIMEQTQRQSQTTTKTPAKPSTKPVSKTPVKVQRVWPPTAQQNNINKGTSSPQNKVTSTASSTTSSTANSNKSEPKPVECNLCHRKFKNIPALNGHMRLHGGYIKKDADSKKCEKKDSNGPPLQTASVSVRALIEEKIINKRITNAPTTTTTTSSEEPATSAPPLFPLTVHSSTTTASGNEHDTKVTSFVVPAPPQSTEKSRRHSDAEAFTIPRAPSSQQEAEALADLILKRDKVGIKRTTSDPGQSQTQTQSQSQSQSQLIQFQSGDSFTLTYPSEDGYLSPSLQDEVFTQVQDSMLLQSVDPQQLASIQFQADSLLQDQSETPLHDISIDDYASLQDASVQSPAYQSSHSVNQELQAVLDSPLPESLAEFSTFHSTSNLDIPSPNYQTQSPAQYSGSPHASISTQSPLQSPLIRHDSPGFAYPTPPASHEGQSPCFGQNTLLPMVSPKQSSDFGTVVNRDVDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESIAADELYPSLTNSPPPQSPLSVGLTPVPSPLSNIPTTSTTSSPHHHNTLNTIAFPLSPHFTLQSQMLPNSDDPLLSSSPKDFAARKKFEFNGLPLKVISSNGLLDLNNSNLTGILVESNGEIKFIQTGGGSFQGKNILLTGAAPLLTSQTVSKDDDAKNNPKVQKILKTVQNALPKTTSQVQLLQRPNIAVDRHDDIINDVFLSPTTIPASPVRISRKRLRSEPLQLPVLHQSRLRATRSKPQGSAPYTPLPILNPNRPGSGLYFYLKQKDNHDEPISWSNESVPESDSTPHINVGPQFQCQIPAFSPAYSRISQERTHEDLLWDPGIANCTDSEVDMYLDFACCAAVPGGGRNQEYAMHLLQMCSGNIHDAMLKLMQPTPSLPSEHPLLRYQYSDSDKWTAAETELFHQALHKYDKDFSIIAQEIGTKTVKQCVQFYYMWKKVCTDEYRKLKQTRERRLGQSRNLDFEEEKPYPDAKLLGIADAGSPMPIQEHRNFICEFPECSASFNSRAALNGHIRIHGGSARNSPTPALLLERRQSSSATAAAAHPFCHTSDSTEDYPCKICGKVFTKIKSRSAHMKSHRPPDADPIKRREKEPVTSTTFDSIPSPFST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01096933;
90% Identity
iTF_01096933;
80% Identity
iTF_01096933;