Omur004991.1
Basic Information
- Insect
- Ontholestes murinus
- Gene Symbol
- -
- Assembly
- GCA_963969525.1
- Location
- CAXAKX010000825.1:69218-69532[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.8 3.5e+04 -2.9 0.1 36 42 2 8 1 9 0.75 2 2 2.9e-08 0.00013 24.1 0.0 2 30 12 40 11 41 0.93
Sequence Information
- Coding Sequence
- ATGGCTAAAAGAGGACATTACGGACGTTGGTCTGAAAGTGATTTATTAAAGGCTGTTGCAGCTTATAGAAATGGAGAGACTGGCTTGAACGAATGTAGTCGTATTTACAATGTTCCTAAAGCAGCATCAGATATGTTACAACCTCAGCATTGCGGCGATGCTACTAAAACAGAAGTAACTACTGGGAATTCAGCACATAGTGACGGTGAAAGCGACAATGATTCCGCTATTGTTTATATTCTTCCGGAGAAAAAGAGGAAACATTTTGAGGATATTCTTCAAGAAATATCACCTCCACCTACACGAAATCCATAG
- Protein Sequence
- MAKRGHYGRWSESDLLKAVAAYRNGETGLNECSRIYNVPKAASDMLQPQHCGDATKTEVTTGNSAHSDGESDNDSAIVYILPEKKRKHFEDILQEISPPPTRNP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -