Omur055502.1
Basic Information
- Insect
- Ontholestes murinus
- Gene Symbol
- -
- Assembly
- GCA_963969525.1
- Location
- OZ018392.1:29293522-29293935[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-09 1.7e-05 26.9 0.0 4 43 14 53 11 55 0.89 2 2 3.6 1.6e+04 -1.8 0.0 23 31 101 109 101 109 0.87
Sequence Information
- Coding Sequence
- ATGGCTAAAAGAGAACATTACAGACGTTGGTCCGAAAGTGATTTATTAAGGACTGTTGCAGCTTATAGAAATGGAGAGACTGGCTTGAACGAATGTAGTCGTATTTACAATGTTCCTAAAGCAACTATAAAAAGACATGCGGACAGAAAAAATGCTACTGCAAATGAAATGAAAGTATTTGGTAGACAACCCACATTTACTAAAGATATGGAAACAATTCTAACCAATCATATACTTCAACTTGAAGAATGCTTTTTTGGATTGACAATTCGAGAAGTGCGAAAAGTAGCTTTTGATTTCGcggaaaaatattctttaccaCACACATTTAATAAAGAGAAGGAAAATAGCAGGGAAAAAGTGGTTTTACTCATTTTTACGTCGAAATCCACAGCTATCACTACGAAAACCTGA
- Protein Sequence
- MAKREHYRRWSESDLLRTVAAYRNGETGLNECSRIYNVPKATIKRHADRKNATANEMKVFGRQPTFTKDMETILTNHILQLEECFFGLTIREVRKVAFDFAEKYSLPHTFNKEKENSREKVVLLIFTSKSTAITTKT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -