Omur018114.1
Basic Information
- Insect
- Ontholestes murinus
- Gene Symbol
- -
- Assembly
- GCA_963969525.1
- Location
- OZ018387.1:95400527-95401114[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9.1e-11 4.1e-07 32.1 0.0 3 43 13 53 11 55 0.91 2 3 5.5 2.5e+04 -2.4 0.0 23 31 101 109 101 109 0.87 3 3 6.4 2.9e+04 -2.6 0.1 15 22 138 145 135 145 0.74
Sequence Information
- Coding Sequence
- ATGGCTAAAAGAGGACATTACGGACGTTGGTCTGAAAGTGATTTATTAAAGGCTGTTGCAGCTTATAGAAATGGAGAGACTGGCTTGAACGAATGTAGTCGTATTTACAATGTTCCTAAAGCAACTATAAAAAGACATGCGGACAGAAAAAATGCTActgcaaatgaaattaaagtatTTGGTAGACAACCCACATTTACTAAAGATATGGAAACAATTCTAACCAATCATATACTTCAACTTGAAGAATGCTTTTTTGGATTGACAATTCGAGAAGTGCGAAAAGTAGCTTTTGATGTCGcggaaaaatattctttaccaCACACAtttaatagagaaaaaaaaatagcaggGAAAAAGTGGTTTTACTCATTTTTACGTCGAAATCCACTGCTATCACTACGAAAATCTGAAGGCACTTCAATGGCAAGAGCACGAGGCTTCAATAGAGAGAAcgtagataatttttttgatatttttgaaaaaactgtggacaaatttaattttactgcagaattaatatttaatgtcgATGAATCAGGGTTTACAACTGTACAAAAAAACTCTACAAAAAGTGGTTGCTCGTAA
- Protein Sequence
- MAKRGHYGRWSESDLLKAVAAYRNGETGLNECSRIYNVPKATIKRHADRKNATANEIKVFGRQPTFTKDMETILTNHILQLEECFFGLTIREVRKVAFDVAEKYSLPHTFNREKKIAGKKWFYSFLRRNPLLSLRKSEGTSMARARGFNRENVDNFFDIFEKTVDKFNFTAELIFNVDESGFTTVQKNSTKSGCS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -