Basic Information

Gene Symbol
ct
Assembly
GCA_963969525.1
Location
OZ018396.1:21240900-21254181[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 3.2e-27 1.2e-22 82.2 0.0 2 72 322 393 321 398 0.95
2 4 2.3e-32 8.3e-28 98.7 0.0 3 77 702 777 700 779 0.96
3 4 0.34 1.2e+04 -1.2 0.0 40 65 797 822 777 822 0.78
4 4 1.7e-30 6.2e-26 92.7 0.0 3 75 912 985 910 989 0.95

Sequence Information

Coding Sequence
ATGGAAGCGGAGCACGACCACAAAATCAACCAATTACTAGACGAGGTCCAGAGGCTGCAGGTCAGCATCACGAAACTGCAGGAGTCCTCCATATCCCAGATCTCCAGGCTCGAGGAGCAACTTGAACAGAAACGGCAGCACATCGCTAGACTGGAATCCAAACTCGACTCGCAAAGAGACTACGATGATCTTAAAAGGGAAATTAGTATATTAAGGacggaattttcaaataatccgGATAAATCAGTCGAGGCCCTGCTGGAGCGAACGAAGATCCAACAGCAACAGCACCAGCAGCTccaacagcaacagcaacagcacCTTCAGCAACATCAGCAGTTACTACAGCAGCAGCAACCGTCCGAGCGGGAATCGAAGACACCCGCTTCCGAAACAGAAGGTGTTGACAACACTAATCCCTCGCCTTCCCCGAAAATCCCGCTTCCGCCCCCATTTCAAAACGTCGAGCAATTCGGCTCGTTGTTAGGGGAGGAGATCGTCGCCAATTGGCGCCGTAGCATTGAACAACTGAACAACCAAATAATCTCGCCCTCACCCTCAACAGATGGTCCGGTGAAGACGCCGACGCCCACGGTAGCCGATTCGACGGAGAAGAGCACAGCTTCAACGCCGCAGCCCGTCGAGTCCATTAGCGGGCCTCAGCCATCCCCAATCCTCAACGGCAATCCGAAGAGTCCGGAGGATAACAACAACCACCATGTCAGCAACAACAACATCCCACTGGCTGCGACGATGCTCAACGTAAACAACTTCCTTAGAGGCGAGGAACTCAAGAGCCCGTACAGATTCGATGAACATCGGTCACCGTTCAGGTTCGCCGAAGATTTAGGCATGGCGCCTGGATCTATGGTGGGTCGCCTGGGCGAAAGCCTGATTCCGAAAGGCGACCCCATGGAGGCCAAACTGCAAGAAATGCTCCGTTACAACATGGATAAGTACGCCAGTCAGAATCTAGATACGTTGCACATCTCCAGGCGTGTTAGGGAGCTCCTCTCCATCCACAACATCGGCCAGCGCCTGTTCGCCAAGTACATTCTGGGCCTGTCACAGGGCACCGTCTCCGAACTCCTCTCGAAACCTAAACCCTGGGACAAGCTCACGGAAAAAGGAAGGGACTCCTACAGGAAAATGCACGCGTGGGCCTGCGACGACCACGCCGTCATGCTCCTCAAATCGCTCATACCAAAGAAAGATTATTTTTCCTCCTCAGGCAAAGATACCGGGATTCCTACCTTCGGAAGGCCAGAAAACGACCTGACAGATGAAAGGATAGCTCACATCCTCAACGAGGCTTCACACCTGCAAATGAAAAACCAAGTCGAGGATAGTCGCAGTAATGATGATTCAAAATCACCACATGGACAATGCCAGTCACCGTTTTCAAAAGACTCATCGCAAAACCGCAGATTGAAGAAATACGAAAACGACGACATCCCTCAGGAGAAAGTCATGAAAATTTACCAAGAGGAACTTGCCAAACTAATGGGAAGAAGGATAGATCCTATCGATATGAGGAATCCTAACGCCTTCCAAGGTATGTTTTTTCCGCAACTTTTTAGTGGCAATCCAATGGATCGTACGCAAGAGGAGATTCGAATGGCACTAGACGCCTACCACAGGGAGATCGTGAAGCTTAATCAGGGCCAAGGAACCCTCCCTAACCTAGGCCTTCTAGCCTTGCAACAGCAAGCAATGGCCCAGCAGAACCCGCTCAACGGTGGCGTCCAAGATCTCTCAATTCCcaaagacaaaatgaagatGGTGAACGGCAGCGAAGAAAAGGATATTAAAGACAGCGAAGATCAGAAACATTCCGCATTCAGCTTAGTCCGGCCTAAACCGGAGCCCATCACCACCCCCCTCCCTAGCTCCACGGCATCCAGCCCTCTCGGTAACTCGATCCTTCCTCCAGTGACTACCGAGGAATTCACTAGCTCCGCCGTTGCCAGCCCACTTCAGCGCATGGCATCCATCACAAACTCCCTTATCTCCCAGCCACCTACGCAACCACACCACAATACCAACCAGAGACCACTCAAAGCCGTCTTACCTCCAATCACCCAACAACAATTCGATCTGTACAACAATCTTAATACCGAAGATATTGTCAAGAAGGTTAAGGAGCAGCTCAGCCAATATTCCATAAGCCAGAGATTATTCGGAGAGTCCGTTTTAGGACTATCTCAGGGCTCGGTGTCGGACCTGCTCGCCAGACCTAAACCTTGGCATATGCTTACGCAAAAGGGACGAGAGCCCTTTATCCGCATGAAGATGTTCTTGGAGGATGATAACGCCGTTCACAAACTCGTAGCCAGTCAGTACAAAATTGCACCTGAAAAACTGATGAGGACAGGCGGATATGGAGGAGCCTGTGCAACAATCAGCAAACCCATGCCACCCAAGATGCTTAGCGAAGCAGCGGGACTCTTTAATAAAATGCAACAGGAGAGCCAAAATCTTCTGCCCCCATCACTACAGCTCGGACCTCCACTTAACCAGAACACCCCTCAACCGCCACCACCCCCGATGCTCTTAACGCCACCAGGTGTACCGCCGCATCACGCTATTAACCTTCAGAACGCAGAGCATCTAAAGAAAGCCAATCATAGTCCACATGGAATTCCACATTCACCCATGGCACAGCAACAGGCGTCGCTCAGAAGTCTTCATCAGCATATATCACCCAGTGTTTATGAAATGGCCGCCTTAACGCAAGATCTCGACACGCAAGTCATTACGACGAAGATTAAGGAAGCATTATTGGCAAATAATATCGGACAAAAGATTTTCGGCGAAGCGGTATTAGGCCTCTCCCAAGGATCAGTAAGCGAGTTGCTTTCAAAACCTAAGCCCTGGCATATGTTGAGCATCAAAGGCAGAGAACCCTTCATCAGGATGCAGCTATGGCTGAACGATGCACATAACATCGATCGGTTGCAGGCACTTAAAAATGAACGCCGAGAAGCGAACAAACGAAGGAGATCATCAGGACCCGGAGCTCATGATAATAGTTCGGATACGTCATCCAACGATACATCAGAGTTTTATCACTCGAATTCTCCCGGTCCCGGACCCCCATCAGCGAAAAAGCAGCGCGTGTTATTCAGTGAGGAACAAAAGGAGGCACTAAGGTTAGCGTTTGCATTAGACCCGTACCCTAACGTCGCCACCATCGAGTTCCTAGCGCAGGAGTTGGGCCTCTCGAGTAGAACAATTACGAATTGGTTCCATAATCATAGGATGAGGTTAAAGCAACAAGTGCCACATGGAATGGCTACAGATATCCCCCCGCGTGACCAAAGCGGCAACCAGGCACCGTTTGACCCCGTACAATTTAGACTGCTATTAAACCAAAGACTTTTAGAGTTATCAAAGGAGCGTATGGGGTTAGGTAGTGTTCCGCTCCCGTATCCACCATACCTAGCGACGAATCCTAACCTGGCAGCGCTTATCAGCAGAGGGCTGCTTCCTGGCGGCGAGATGGACCTAAGCGCCTTGAACAACGCGGTAAAGGAACAAATGAGTGGACTTGATCTGTCCATGGGTAACCTGAAGAGGGAACCCGGTGATTATGACGATGAAGACGAAATAGAGAGTAATGCGGGCTCGGAAGATTCAAATTTATCGGGAAGTTTGCATGGTGAAGTGAAGATCGAACCAAAAGAAACACCTGTCCAAGCGCGGTCATCGCGGCGAAAGCCAGCAGCACCGCAATGGGTCAATCCCGAGTGGCAAGATGAAAAAGAGAAACCCCCCACGGGAGACGAGGTCATAATTAACGGAGTCTGTGTGATGCAAACAGAAGATTACGGCCGAAGGAATAACGAAGAAACCGTCCGCGTAGAACCGACCCCAGTGATGGACAGGTTCGAGGATGACCAAAGTGACGCTTCTTCAGTAAGCCAAGAAAACGACGCCCAAAACGAACAAGGAGAAGACAAAACGGAGCGCGACCCTTCTGAAGAAACGCCCGACGTGAAAACGGAAAAACCAGAAAACGAAGAAGAAAGATGGGACTATTAA
Protein Sequence
MEAEHDHKINQLLDEVQRLQVSITKLQESSISQISRLEEQLEQKRQHIARLESKLDSQRDYDDLKREISILRTEFSNNPDKSVEALLERTKIQQQQHQQLQQQQQQHLQQHQQLLQQQQPSERESKTPASETEGVDNTNPSPSPKIPLPPPFQNVEQFGSLLGEEIVANWRRSIEQLNNQIISPSPSTDGPVKTPTPTVADSTEKSTASTPQPVESISGPQPSPILNGNPKSPEDNNNHHVSNNNIPLAATMLNVNNFLRGEELKSPYRFDEHRSPFRFAEDLGMAPGSMVGRLGESLIPKGDPMEAKLQEMLRYNMDKYASQNLDTLHISRRVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDHAVMLLKSLIPKKDYFSSSGKDTGIPTFGRPENDLTDERIAHILNEASHLQMKNQVEDSRSNDDSKSPHGQCQSPFSKDSSQNRRLKKYENDDIPQEKVMKIYQEELAKLMGRRIDPIDMRNPNAFQGMFFPQLFSGNPMDRTQEEIRMALDAYHREIVKLNQGQGTLPNLGLLALQQQAMAQQNPLNGGVQDLSIPKDKMKMVNGSEEKDIKDSEDQKHSAFSLVRPKPEPITTPLPSSTASSPLGNSILPPVTTEEFTSSAVASPLQRMASITNSLISQPPTQPHHNTNQRPLKAVLPPITQQQFDLYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACATISKPMPPKMLSEAAGLFNKMQQESQNLLPPSLQLGPPLNQNTPQPPPPPMLLTPPGVPPHHAINLQNAEHLKKANHSPHGIPHSPMAQQQASLRSLHQHISPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNIDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAQELGLSSRTITNWFHNHRMRLKQQVPHGMATDIPPRDQSGNQAPFDPVQFRLLLNQRLLELSKERMGLGSVPLPYPPYLATNPNLAALISRGLLPGGEMDLSALNNAVKEQMSGLDLSMGNLKREPGDYDDEDEIESNAGSEDSNLSGSLHGEVKIEPKETPVQARSSRRKPAAPQWVNPEWQDEKEKPPTGDEVIINGVCVMQTEDYGRRNNEETVRVEPTPVMDRFEDDQSDASSVSQENDAQNEQGEDKTERDPSEETPDVKTEKPENEEERWDY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01400151;
90% Identity
iTF_01096497;
80% Identity
iTF_01096497;