Basic Information

Gene Symbol
Kdm5
Assembly
GCA_963969525.1
Location
OZ018399.1:12023297-12029398[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.5e-24 4.6e-20 74.3 0.0 2 89 111 194 110 194 0.95
2 2 7.9 1.1e+05 -3.8 0.0 32 62 1236 1267 1225 1279 0.70

Sequence Information

Coding Sequence
ATGTCGGTGAAAGATGGCAAATCCAGCCCAACATTTAGTGTGAATGGAAGCTGCTCAAATGACTCGACCAAAGCATCGAACGCCTCCACGAGGCAAGATATCTTTGAATTTGCTGTACCACCGGAAGCCCCCGTTTTTCATCCCTCAGACACTGAATTTACTGATCCTTTGGTATATATAGACAAAATTCGGCCAGTGGCAGAGAAGTtcggaatttgtaaaattaaaccaCCAGTTAATTGGCAGCCTCCGTTTGCAGTGGATGTAGATAAGTTAAAATTTACCCCCCGTATCCAAAGATTGAATGAATTAGAGGCTAAGACCCGTATTAAACTGAACTTTCTCGACCAGATTGCAAAATTCTGGGAATTACAAGGGTCTTCTTTAAAGATCCCGATGGTAGAAAAGCGTGCTCTTGATTTATACACATTACACAGACTGGTGGAAAATGAAGGCGGATTTTCAGGTGTGACTAAAGAAAGAAAGTGGGCAAAGATTGCCGTTTTCATGGGGTATCCGCAGGGAAAGGGAATTGGAACAATTCTGAAAACACATTATGAAAGATTACTATATCCATTCGaattattcacaaatgaaaaGAAGGCTGGTAAAGATATTAAACTTGAAGGAGGAGATGATGACAAGGAatataaaccaataaaatcaaaattattaaatgacatGAGCcctttaagtaaaaaaaatatttactctagACGTAGCAAAGGGAAGGAGCGACGTAATGGCACTGGTGAAATTAAAGGTGAGAAGTTAGAGATTAAGTCAGAGGTGACCAGTGaaagtgacagtgacaacaAGGAACTAAAAAGGCTACAGTTTTATGGTGCAGGCCCTAAAATGGCTGGATATAACATCAAGAAAAAAGTTGACGATAAAGCTCGCGTGAAGTCTATTGAATATACAGAAGATCCCTTGGCAAAGTATATTTGCCACAACTGCAGAAGGGGGGATTCTGAGGAACAAATGTTGTTGTGTGACGGTTGTGATGATAGTTACCACACATTTTGTTTGATGCCACCGCTGGCTGAAATTCCGAAAGGAGATTGGTGCTGCCCAAAGTGTGTAGCTGCTGAAGTTTCTAAGCCAACTGAAGCATTTGGTTTTGAGCAAGCTCAAAGggaatataatttacaacaatttgGTGAGATGGCTGATACCTTCAAATCAGAGTATTTTAACATGCCTGTACATctgGTACCGACTTCTATGGTTGAAAAAGAATTTTGGAGGATTGTATCTTCAATTGATGAAGACGTAACAGTTGAATATGGTGCAGATTTGCACACAATGGACCATGGATCTGGTTTTCCTACCAAAAATTCATTACATCTTCTTCCTGGTGACCAAGAATATGCATTTTCTGGCTGGAATTTAAATAACTTGCCTGTATTAGAAGGATCTGTTCTAGGTTATATTAATGCTGATATATCTGGAATGAAAGTTCCATGGATGTATGTGGGAATGTGCTTTGCCACATTTTGTTGGCACAATGAGGATCACTGGAGTTATTCAATTAACTATTTGCATTGGGGTGAACCAAAGACATGGTATGGGGTATCTGGTACAAAGGCCGAGCTATTTGAAGAGACAATGAAGTCTGCAGCTCCCGAGTTATTTCAAAGTCAACCTGACTTACTACATCAACTTGTAACAATTATGAAtccaaatattttgatgaatgCTGGTGTCCCTGTGTATAGAACAGACCAACATGCTGGAGAATTTGTTATTACCTTTCCTCGTGCCTATCATGCAGGCTTTAATCAAGgataTAACTTTGCTGAAGCTGTCAACTTTGCACCTGCTGATTGGGTAGCCATGGGTAGGGAATGTGTTTTGCATTATTCTCAATTAAGAAGATTCTGTGTCTTCTCACATGATgaactggtttgcaaaatggccaGTAATGCGGATAAATTAGACATTACAGTGGCAGCTGCTACTTATACCGATATGCTAAGAATGGTTgaaacagaaaagaaattgaGGAAGAGTCTTCTAGATTGGGGAGTCACAAATGCAGAAAGGGAAGCATTCGAGTTACTACCGGACGATGAAAGACAATGTGAAATTTGCAAAACGACCTGTTTCATGTCTGCCTTAACTTGTAGCTGCTCCACAGAAATGCTAGTCTGCCTTAGACATTATACTAGCCTTTGCAAATGCGCTCCAGCAAACCATACTCTCCGCTATAGATACACTCTTGATGAACTGCTCCCCTTACTTCGAAACCTAAAACAAAAAGCAGAATCCTTTGACAGATGGGCGGATAAAGTCAAAGATGTTCTAGACCGTAAAACACCGACAACTGTAAACCTATCAGAATTGAAGGCATTACTTGCTGAAGCAGATGGGAAAAATTTTCCTAAATCAGATTTATTACAAACTTTAGCAAATGCTATTGAAGATGCAGAAAAGTGTGCTAGTGTAATCAAACAACTAGACTTAAACAAAGTTAAGACCAGACATTCGATCGATAACAAAAGTAAGCTTTCATTAGAAGAACTAAGATTGTTCTGTGAGGAAATTGAAAGCCTAGCGTGTAAACTTGATGAACACActgtaattaaagaattattgggTAAAACGAACCATTTTGAATCAGAAGCTAAACgcttattaaaaattgaactgAAGGAATGTGCTTTAAAAGAAGTTGAGGATCTAATTGAATTTAGCAATGGGTTAGTTATTGACCTACCTTCACTAAAACCATTAAAGAACAGACATAATCAATTAAAGTGGATTAAAGATGTTTATGAGACTAGAAAGAAATCACCTGACATTGCTGATATTGACACACTAAAAGAGCTGCTAAGAAAGGGCTTTACCCTACCAAGCCTTcctttaatagaaaatattttgacagaTATTCAATCTGTGATTACCCAAGCTGAGGATTGGGAAGAACGAGCACAAGCTGTGTTTAAAAAGAATGGACCTGAAGCTGTAACAGAAGCTGAAGATCTAATTAAAGCAGCAGTAAACATTGAAGTATACCTTCCCACTGAAAATCTTTTGGTTGATAATGTAAATAGTGTGAATGAATGGTTCAGACAATTggagaaaataaattcattggAGTTTTATCCATACCTAACAGCAATTGAAGATTTAGTTAAGAAGAGCAAAAATTTCCCATTCCAACTAGATGAAGTTGAAcgattaaaaacatatataggTGCAGCTATTGCATGGAAGGATAagacttcaaaaattttttctaGGAAGAACAGCAGCTATAGCCTTATGGAAGCCTTATCTCCCAGAACTCAAATGTCGCCAACAAAAACAAGGAAAAAGAACGTTGATGATTGTATCAAGCTGGCTGATAACATGGATCCAACCGCTGTTGTATCCATGTTCAAAGATGCTGAAGATAAGGAGATGAAGCTTATTCAAAATATGAGAGAAACTAACATGTCTAAAATTGTAACTATTGAGAGTAAACATACATTCTGTGTGTGCCAAAAAGAAGTCTTTGGCATCATGATGCAGTGTGAATTATGCAAGGATTGGTATCATAATACATGCATTCAACTACCAAAATTGGCTACTAGTAGTTGGAGGAAGAATATTAAAGCTGTAGCCATTCACTTAGGCCTTAAGGAGTCAAAATTCCTTTGTACAAACTGTTTCAGAACAAAACGACCTAGGCTAGAAACAATTTTGGGATTATTAATGTCCTTACAAAAACTACACAACCGTCTGCCTGAAGGTGAAGCCTTACAATGTCTAACAGAACGTGCTATGAACTGGCAAGATCGTGCTAGACAACTTCTACAAAGTACTGAGGTAGCTGGAGCCATTACTAAGATTGATAGTATAATTCTTAAAAGTAATGAAGCTGCAATTCGTTCGAAAAATGATAAGATTGCAAAAGCAGAGTTAAGGAGAGCGAATAATCCAGATGAGACCCTCATGAGTGGtattaatgaagaagaagattCACAGAGTGCCAGTTCATCAGATGAAGATGATAGTAAAGATGAGCATGCATATTCCATGAATGTTTCCAagtttgatgatgatgattacaGCATTAAATTAAGTGCTGCAACGAAAGATCATCTAGAGGAATTGGCGGTGGAGGGAGATTTGCTTGAAGTATCCCTGGAAGAAAATAATCAGCTGTGGAAGGTGTTATTCTTATCAAGAGATATTGAGAAGAATCCTATAATCATTGATTTTGatcaATCTATTCAGAAaccaaatgtaaacaaaaaggGAAGGAAACGCAGGTCAGATGAGGTGGACATCCTTACAAAGGGTACAAAGAAAGATACTAATAAAAAAGTGAGAGGTCCACGCAAACAAAAGGACAACATTGTGCGTGACGTTAAAGAAACAAGAAAGCGTAAGGGACGCGGTCGCGGTGGTGTACAAAACTTAAGTGATGATGAAGCCGATGAGGACGCTATGTGCGCAGTTTCAACATGCTTACAACCAAATGGAGATGAAGTGGACTGGGTGCAGTGTGATGGGGGATGTGAACAATGGTTCCACATGGCTTGTGTTGGTTTATCCGCTAAGGATATTAATGAGGATGAAGATTACATATGTTCCGCATGTTCTCCAGACTCTGTTAAACAAAGACTAAAAATGTCTCCTGAAGATGACATAGTCATAGAATTTTAG
Protein Sequence
MSVKDGKSSPTFSVNGSCSNDSTKASNASTRQDIFEFAVPPEAPVFHPSDTEFTDPLVYIDKIRPVAEKFGICKIKPPVNWQPPFAVDVDKLKFTPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVEKRALDLYTLHRLVENEGGFSGVTKERKWAKIAVFMGYPQGKGIGTILKTHYERLLYPFELFTNEKKAGKDIKLEGGDDDKEYKPIKSKLLNDMSPLSKKNIYSRRSKGKERRNGTGEIKGEKLEIKSEVTSESDSDNKELKRLQFYGAGPKMAGYNIKKKVDDKARVKSIEYTEDPLAKYICHNCRRGDSEEQMLLCDGCDDSYHTFCLMPPLAEIPKGDWCCPKCVAAEVSKPTEAFGFEQAQREYNLQQFGEMADTFKSEYFNMPVHLVPTSMVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKNSLHLLPGDQEYAFSGWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVSGTKAELFEETMKSAAPELFQSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWVAMGRECVLHYSQLRRFCVFSHDELVCKMASNADKLDITVAAATYTDMLRMVETEKKLRKSLLDWGVTNAEREAFELLPDDERQCEICKTTCFMSALTCSCSTEMLVCLRHYTSLCKCAPANHTLRYRYTLDELLPLLRNLKQKAESFDRWADKVKDVLDRKTPTTVNLSELKALLAEADGKNFPKSDLLQTLANAIEDAEKCASVIKQLDLNKVKTRHSIDNKSKLSLEELRLFCEEIESLACKLDEHTVIKELLGKTNHFESEAKRLLKIELKECALKEVEDLIEFSNGLVIDLPSLKPLKNRHNQLKWIKDVYETRKKSPDIADIDTLKELLRKGFTLPSLPLIENILTDIQSVITQAEDWEERAQAVFKKNGPEAVTEAEDLIKAAVNIEVYLPTENLLVDNVNSVNEWFRQLEKINSLEFYPYLTAIEDLVKKSKNFPFQLDEVERLKTYIGAAIAWKDKTSKIFSRKNSSYSLMEALSPRTQMSPTKTRKKNVDDCIKLADNMDPTAVVSMFKDAEDKEMKLIQNMRETNMSKIVTIESKHTFCVCQKEVFGIMMQCELCKDWYHNTCIQLPKLATSSWRKNIKAVAIHLGLKESKFLCTNCFRTKRPRLETILGLLMSLQKLHNRLPEGEALQCLTERAMNWQDRARQLLQSTEVAGAITKIDSIILKSNEAAIRSKNDKIAKAELRRANNPDETLMSGINEEEDSQSASSSDEDDSKDEHAYSMNVSKFDDDDYSIKLSAATKDHLEELAVEGDLLEVSLEENNQLWKVLFLSRDIEKNPIIIDFDQSIQKPNVNKKGRKRRSDEVDILTKGTKKDTNKKVRGPRKQKDNIVRDVKETRKRKGRGRGGVQNLSDDEADEDAMCAVSTCLQPNGDEVDWVQCDGGCEQWFHMACVGLSAKDINEDEDYICSACSPDSVKQRLKMSPEDDIVIEF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01185961; iTF_01126138;
90% Identity
-
80% Identity
-