Ofas018409.1
Basic Information
- Insect
- Oncopeltus fasciatus
- Gene Symbol
- -
- Assembly
- None
- Location
- Scaffold699:523329-545737[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.0038 0.23 12.0 1.3 2 23 573 596 572 596 0.91 2 16 0.0067 0.41 11.3 3.3 3 22 663 682 661 685 0.89 3 16 0.12 7.2 7.4 1.6 1 23 733 757 733 757 0.97 4 16 0.00052 0.032 14.8 2.0 1 19 832 850 832 851 0.97 5 16 0.037 2.3 8.9 0.4 3 23 896 917 894 917 0.95 6 16 0.00043 0.027 15.0 1.3 1 23 964 986 964 986 0.98 7 16 0.31 19 6.0 4.2 1 23 992 1014 992 1014 0.92 8 16 0.0016 0.098 13.2 2.9 3 21 1025 1043 1024 1044 0.95 9 16 0.0019 0.12 13.0 1.8 1 23 1054 1077 1054 1077 0.93 10 16 0.00023 0.014 15.9 1.3 2 23 1175 1197 1174 1197 0.95 11 16 0.041 2.5 8.8 3.2 2 21 1227 1246 1226 1247 0.94 12 16 0.077 4.8 7.9 1.0 2 20 1407 1425 1406 1427 0.94 13 16 0.046 2.9 8.6 0.0 3 19 1528 1544 1527 1546 0.95 14 16 0.69 43 4.9 0.4 2 13 1560 1571 1559 1576 0.82 15 16 0.0068 0.42 11.3 1.5 1 23 1612 1634 1612 1634 0.95 16 16 0.0027 0.17 12.5 4.7 1 23 1706 1728 1706 1728 0.98
Sequence Information
- Coding Sequence
- ATGATGGAAATTACTAATGTGAAAGAAGCTTGTAGGCTTTGTCTTCGTGGGGAAGGTAAAATATCAGTTTTTGAAAATGGTGTAAAAACGGGAGCTGTTTCGGCAGAAAGTATATTTGACTGTGTTTCTGTTAAGATAGCAAAAGATGACACATTACCCACAGGGATATGTGAAAACTGCCTACTTTCAGTGGAGAACTGGTGTTCTTTTAAAATTACATGTGACCGATCACAAGACTTATTACAGGGATGGCTTGTTCGAGATAACTTAAGAGTGGAGGGAAATTCCATTACACTCGAAGATGACCTAAAAAGTTCTTTCAATAAATGTAATTTACTGGATAAGCCATCTTCTTCCACAGAACCAACTATATCTTTAGACTCAAATTCACTTTCCCCATCTAGGAGTATTGATGAATGCATTATAAATATCCGTCCTAATGATGACAAAGATTCTGAAGAACTCCTGGAATGTAAATATGAAAATATTTTGCTTAGTAATAAGACAGAGCATAAAGAAAGTCCAAGAGAAACAAGTGACTCTGATATAAGTAGATCTGATTTCATTGCTTCCAACTTGTGTACTGTAGAGAAGCCCATGGTTCCTGACACTATTGTATCTTTTGAAATTTCTGATGAAGAAGAAACTGAACCCAAGACTGTAAATTTATATGATTCCTGTGTAAATAATAATGAGCCCCCCCTGACACCTAATAGTAATTCTGAAGAAAGTAATACTGCAAGTTTTAAAAATGTCTCTGATGCAATTGATCAGGTTTCCAAACAGTCTGTAAGCGACTCTAATATCAATGGAAGTGATGGAGATTTACAATCTATTCCTGTAATAGAAAGTGATGAAAATATCTTGGACAATGAAAAAACAAATACACTCGTTGAATCAAATTTTTCAAAGGAAACAGAAAATCTTCCCTCCATGCTGGGAAACAATGCGGATGAATTTATGAATGTTTGCGATGATGACAGCAACTCAGTTCAAATTCTTATTGAGGGCAAAGAAAATTCATTCAATGACTCTGGCATCTATGACAATAAAAAGACTGATAGTTCCTCTGAAAAAGCTGGCGACGAAGTCATATCATGTGAGGAGGATGAACAAATTGTTGAATTCACTACAGCTGTTACAATTGACATAAATCCTTTCCCTGTTGGTAGTGAAACAGAACAACCTGTTGAAAAAACAAAAAACTGTGCCTCTACTGGCTTTGAAGAACTAGGAGGATCCATATCTGCTCAGATACTTGTTGAGTGTGAAAAAGAAACTGATCAACCCGAGGTCCTGGATGAAATTACCTCTCTTCCTTTAGACACTGGAGAGGTAGTTTCATCGTCATTGTCTCCTCCAAAGGTAGATTCACCTGCAAAGGTGGATGAAAAAGAAGGAGAAGTAAGCAGCTCTGTTGAAAAACCTTGCCCAACTTCAGAAATTAACCAAGAGGAAGCCATAGATAAATTAGTTGAAAACAGTGATCATCCTCCAAATTCTGAAAAGGACAATGAATCTTTTGAACCTTTGATTACTACAATCAAGGAAGAGCCAATTGATTCAACTACTGATGACACACCAGTTCAAGCACCTTTGCTTCGAGTGAAGTCTGAATTTTCTACATTTAATTTTAGAAATGAATCTAATGAAGACCAGTCTTGGGAAAATAATGAAAGAAGACAAATTCCTAATCCAGACGATCCAAACAATTCAGAATGTTTTGTTTGTAACAGGAAATATTCAACTGTTAGTAATTATAGGCAACATCTTCTTACAAAAATGCATCTTTTTAATTCTGGACAAGTAGTTGTCCTTGAACCAAGTCCTAACAAGGAATCTCCTAAGGAAATTCCAACCTTTGAGTCTCCTTTACTTCGCTCTCGATTGAGTAGTGATCCATTGAATCACCCCTCATATGCAGAACCTTCACCCCCTCCTGCTCCACCTACTCCCCCTCCCCTCAAGAGAAAACTTGTGGATCATTGCCGGTTATGCAACACATCTTTTTCTTATACATCTGAATTAAGAAAACATCTGCTTTCTAAGAAGCACCGTTTAAATTTGAGGCTTCAACGATATAGAGGTCCTCAAGCAGAGGAAAATTTTCCTGGAGCCCAAAGCTTGCCAAAACTTGCTCAGCGTCAACAAGATACTGAAAAGTCACCTAATGTTCAAGAAAGTAGCAAGTCTATATTTATATGTCCCATTCAAAATTGCCATTTTTCATGTGTAAAAGGAGATAGTTTGTTGGAACACATGAAGGTCCATGGGATTGCACAACCTATAGAAAGTGTTGAAGAACCAATTCCTCCAAAGCCTAAATTGAGTTTAAGACAACAAGATATGCTTAAAAAAGAACAAGAAATGAAGTTAAAGAAAGAAGCAGAAATGAAATTAAAGAGGGAAGCTGAAATGAAACAATTTCAGGAACAGCAAGAACTTATAAGACAGCGAATGCAACTTTCTTACATGCCTGCTTCCATTATGCCTTTTGAATGTGAGGGATGCCACAAAACCTTTTTTAGAGAGAGTGGTCTTAAAAAACATTCTTGGTATTGTAAAGCTTTAGATAGACAACGATTTAATGAAGATGATGATGAAGAAGAAGAAGTTGAAGGAGATGAAGTTGAAGTCGAAGATTCACTTTTAGAGAATGATGATTCTGAGGGTTCTGTGTCTCATTGCCCTCTTTGTGATATTAGTTTCACTGCCAGGAATGTGTTTATTAATCACATCCAGATTTATCATAAAGGCTCTTACCTCGAAAGTAGTATACCTAAAGCATCTGGTAGTACAAAAAAAATCCCTCAAAAAACTCTTCCTAGATCCAACGTCAGTAAGTTACAGATTTCTAGTAAGCTTCGTGTCACAAATAAAACACACGGTTTTAGTTGTGATATTTGTGGGAAAAAGTTCAATTTACTTTCATCATTGAATTTTCATTTAAAAACACATACTGTAAATGTAAGACACATTTGCAGGATCTGTAAAGAACCTTTTAGTAATCGTAAAGCATTCATGGAGCACTGCAGGCAACATTTTTTAAAACCAGGTTCAAAAGAAACCTTGTGTCACAAGTGCTTCAAGGTTTTTAAAACTAGAAGTGAGCTATACCAACATAGGAAAAATGATCAATGCTCAATAAAATTAAAAATTTATTCTTGTAATTTTTGTCAACACTCATTTAAAGACCCTGAAGCTTTGGAAGAACATAAAGTTAGATTCCATAGTGAATCTCTTGACATGGCTAATGATACTTTACATGGTTCATCCTATGAGGAACTTTATGATGATAGTTTTATTCCTTTAAATCCCCTTAGTTTGCTATCACAACAAAGCGATAATATGCCTGGCACTTCTTCGAGAGTGACAAGTGGGTACTCTAAATCCTCGATGTCTCTCAAAAAAAATTTTTCTTCACAAAATGCATTAAGTTACTCTAACACTAATGCAGCAGCATACAGTATTAAAAACAGTCCAAATTATAGTCAAAGTCCAACTCCTGTTGATCCTCCTCTTCAGTGCAATGTATGCCAGACTAACTTTTCATCAAAGCAAGCTTTAAAGAAACACACAATAATGTTTCATATTATGAATAAGCCTTATTCAGGTTCTAAAAGATATTCTTCGCAGAGGAAGGGTAACATTATTCAAGCCAATATGTTGAAACAATGGAAATGCCGGCATTGCAAGCAAGCTTTTAGAACTAGAAAAGTTTTGGTTCACCACTTAAAAAAGTGTGACTATAATTCTTTTGAAGATATGAAAGGAATATGCCTTCAATGCGGCAAATGGTGTGAATCAGGCAAGACAAGAATTTGTCAGTTTTGTTTACCTGATTTGGCAAAGGATCCAGATTTTGATAAAAAAAGAATGTTAGAACTGAGCAAAATGAGACGTGTTGAACAATTAATTGCTCAGGGCTCCCAGCAACCTAAAGCTATTAAACAAGAATTCCCTTTAGACTATACACAACAAAGTCATAGCTCTTTTCTGGGAAATATGCCTCAAAAGATGGCAGAGAATATTAAAAAAGAGGTAATTACTGCAGCAGAAGCTAAGGAAATTTCCAGATCTAAAGGATCTAAAAATAATGCCCCATCTGCAGGTGTAAGTGATATTCACCTGATGAAGTGTCCTATTGGTAATAAATATTTTAGAAGTGAAATTACTATGGTGAGGCATTATTCAGAATGTGATGGGAGTTGTGAAAACAGGTGCAGTCAATGCCGGAAATTATTTAATACTCTCAAAGAGTACGAACGACATTTACTTTTTTCTAAATGTTTTGGCCCTCGAAAATCTGAAAAAAGGAAAGCAAAAATGAGATATCCCACTTTTGCCTGTAAGAAAAAGAAAGTTCGTAGAGATTTACCCAATTCGTCTCGCTTGGGTGAAGATTTAAGAGCAAAGCTGCTCAAACAAACATCAGATAAGCTGCCTGATAATTTTTTGGATGTTATGGAAGTAAGTGCCTATTCAGAAGACAACAGTAGTGTTGGGGTTGAGTCCTCATCATCTTCATTTTCCTTTGTTAATAAGGCTACTGAAGAAAAATCATTGAAATTAGGCAGGATTTGTACAGTTTGCAATAAAGTTATTACAACTCAAAGGGCACTTTACCGACATGCATATTGCTGTTTTAAAACAATATTACTTTCTCAGGACAGTGTTACTTGTCCAAAATGCAAGAAAAACTTTAACAAACTTGTCTCTATGAAAGAAAATGCAGTAGGAATCAAACAACATATTCTGGATTGTTATTTTGTCCCTTATTATATTGGCCAAGGAATAAGGGATGATGGAAGTCGTTTGGATACTCCCCCACAATATCTTTGTTACATCTGTTCATTTGGTTTTTCATCTAATGAATGTCTGACAGTGCACATAAAGGATCATAGACACAACAAAGATGAAACAAATAATATAGTTCTTCAACTTGAGGAGGAATTATTGTCAGATGAGAGGATGGCAAATGATATGTCCATGTTTTCATTTCACATTAAGGATGTCAAGACTCTTGAAGCTCCTCCAGTATTGGTTGGACGGGTTTTAAGTTTACAAGATTCTTTTCCTAAAGCTAATCAGCCAAAGCGATCTTCAATTAAGGTTTTTGAATGTGATACCTGTTCCAGAAAATTTTATAATAAGAAAAAATATCTTCGACATAAGAGAGTTCATGGTATCATCTCAGAAACTGTATATAAAGAAACAGCAGTAGAAAATTTTGTTGAAGTGGAAAGTGGCAATGCCTTATCAAATACTTAA
- Protein Sequence
- MMEITNVKEACRLCLRGEGKISVFENGVKTGAVSAESIFDCVSVKIAKDDTLPTGICENCLLSVENWCSFKITCDRSQDLLQGWLVRDNLRVEGNSITLEDDLKSSFNKCNLLDKPSSSTEPTISLDSNSLSPSRSIDECIINIRPNDDKDSEELLECKYENILLSNKTEHKESPRETSDSDISRSDFIASNLCTVEKPMVPDTIVSFEISDEEETEPKTVNLYDSCVNNNEPPLTPNSNSEESNTASFKNVSDAIDQVSKQSVSDSNINGSDGDLQSIPVIESDENILDNEKTNTLVESNFSKETENLPSMLGNNADEFMNVCDDDSNSVQILIEGKENSFNDSGIYDNKKTDSSSEKAGDEVISCEEDEQIVEFTTAVTIDINPFPVGSETEQPVEKTKNCASTGFEELGGSISAQILVECEKETDQPEVLDEITSLPLDTGEVVSSSLSPPKVDSPAKVDEKEGEVSSSVEKPCPTSEINQEEAIDKLVENSDHPPNSEKDNESFEPLITTIKEEPIDSTTDDTPVQAPLLRVKSEFSTFNFRNESNEDQSWENNERRQIPNPDDPNNSECFVCNRKYSTVSNYRQHLLTKMHLFNSGQVVVLEPSPNKESPKEIPTFESPLLRSRLSSDPLNHPSYAEPSPPPAPPTPPPLKRKLVDHCRLCNTSFSYTSELRKHLLSKKHRLNLRLQRYRGPQAEENFPGAQSLPKLAQRQQDTEKSPNVQESSKSIFICPIQNCHFSCVKGDSLLEHMKVHGIAQPIESVEEPIPPKPKLSLRQQDMLKKEQEMKLKKEAEMKLKREAEMKQFQEQQELIRQRMQLSYMPASIMPFECEGCHKTFFRESGLKKHSWYCKALDRQRFNEDDDEEEEVEGDEVEVEDSLLENDDSEGSVSHCPLCDISFTARNVFINHIQIYHKGSYLESSIPKASGSTKKIPQKTLPRSNVSKLQISSKLRVTNKTHGFSCDICGKKFNLLSSLNFHLKTHTVNVRHICRICKEPFSNRKAFMEHCRQHFLKPGSKETLCHKCFKVFKTRSELYQHRKNDQCSIKLKIYSCNFCQHSFKDPEALEEHKVRFHSESLDMANDTLHGSSYEELYDDSFIPLNPLSLLSQQSDNMPGTSSRVTSGYSKSSMSLKKNFSSQNALSYSNTNAAAYSIKNSPNYSQSPTPVDPPLQCNVCQTNFSSKQALKKHTIMFHIMNKPYSGSKRYSSQRKGNIIQANMLKQWKCRHCKQAFRTRKVLVHHLKKCDYNSFEDMKGICLQCGKWCESGKTRICQFCLPDLAKDPDFDKKRMLELSKMRRVEQLIAQGSQQPKAIKQEFPLDYTQQSHSSFLGNMPQKMAENIKKEVITAAEAKEISRSKGSKNNAPSAGVSDIHLMKCPIGNKYFRSEITMVRHYSECDGSCENRCSQCRKLFNTLKEYERHLLFSKCFGPRKSEKRKAKMRYPTFACKKKKVRRDLPNSSRLGEDLRAKLLKQTSDKLPDNFLDVMEVSAYSEDNSSVGVESSSSSFSFVNKATEEKSLKLGRICTVCNKVITTQRALYRHAYCCFKTILLSQDSVTCPKCKKNFNKLVSMKENAVGIKQHILDCYFVPYYIGQGIRDDGSRLDTPPQYLCYICSFGFSSNECLTVHIKDHRHNKDETNNIVLQLEEELLSDERMANDMSMFSFHIKDVKTLEAPPVLVGRVLSLQDSFPKANQPKRSSIKVFECDTCSRKFYNKKKYLRHKRVHGIISETVYKETAVENFVEVESGNALSNT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -