Basic Information

Insect: Oncopeltus fasciatus
Gene Symbol: -
Assembly: None
Location: Scaffold2268:147210-152259[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.042 2.6 8.8 0.1 1 20 175 194 175 196 0.92

2 10 0.00018 0.011 16.2 2.5 1 23 247 270 247 270 0.96

3 10 2e-06 0.00012 22.4 1.8 1 23 276 298 276 298 0.98

4 10 6.2e-08 3.8e-06 27.1 3.6 1 23 304 326 304 326 0.98

5 10 1e-05 0.00064 20.1 0.8 1 23 332 354 332 354 0.98

6 10 0.00033 0.02 15.4 0.7 1 23 360 382 360 382 0.97

7 10 1.7e-05 0.0011 19.4 0.7 1 23 389 411 389 411 0.97

8 10 0.01 0.62 10.7 5.1 1 23 417 440 417 440 0.92

9 10 9.2e-05 0.0057 17.1 0.1 1 23 446 468 446 468 0.96

10 10 0.00041 0.025 15.1 5.2 1 23 474 496 474 497 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.042	2.6	8.8	0.1	1	20	175	194	175	196	0.92
2	10	0.00018	0.011	16.2	2.5	1	23	247	270	247	270	0.96
3	10	2e-06	0.00012	22.4	1.8	1	23	276	298	276	298	0.98
4	10	6.2e-08	3.8e-06	27.1	3.6	1	23	304	326	304	326	0.98
5	10	1e-05	0.00064	20.1	0.8	1	23	332	354	332	354	0.98
6	10	0.00033	0.02	15.4	0.7	1	23	360	382	360	382	0.97
7	10	1.7e-05	0.0011	19.4	0.7	1	23	389	411	389	411	0.97
8	10	0.01	0.62	10.7	5.1	1	23	417	440	417	440	0.92
9	10	9.2e-05	0.0057	17.1	0.1	1	23	446	468	446	468	0.96
10	10	0.00041	0.025	15.1	5.2	1	23	474	496	474	497	0.95

Sequence Information

Coding Sequence: ATGGATAACGGAATAGACGAAAGGTGTAGACTTTGTCTGTCTAATGATATAATTGAGGAATCTATATTTGAACCTCGAGATGATGAAGCTTCATTTTGTACTAAAATAATGATATGCACTGGAGTGATGGTTTCATCTGAAGATGAATACTCCAAATATATTTGTAATCATTGCGCTGATATGTTAGAACTTATGTATGATTTTCGTAAAAGGTGCTTTAAAACATACATTTCTCTTAACAGTACCTTAAATGCAGTACCTGAGAATAGTAATATATTGGAAATTCAGAATGACCAGACAGCAGTGTATGATAGAATTGTAGACAGACTGAGGAAATCACCTACAAGCGAAACAGTGAATGACAAGGAAAGTGATTTAGGAATTGACAGAGTTGTTTCAGAGGAGGTAGTTTTTGATGATGACTCAGGTAAAGAAACCTTTACTGAAAGACAATTCCAAGTTGGTTGTTATGTCCCTTTTCTTGAAGATGATCCTGAGAAGGAATTCCCTTTAATGAGGAGGTTTAAGTGTACTACTTGTAAGAATGTCTTTTCCTCCATTAATGAACTTGATGAACATTGGGATATTTGTGCTGATTTGGTTGGGAATGATGATAGCATGAGGGACTTTATGAATGTTGACACTGGAGATGAAAATATTATTTATGAAGATGAAGTTGATGAATCTGGAAATGATGATGACTGCCAAATTGGGAAGAAAAAAACAAAAAACAAAGAGTTTTGTTGTGAAACTTGTGGGCAGATATTTAAACAACTTTGGTTACTTACTAGACATAAACAGGTTAAGCATGTTTGTGAGCGTCCATATAGTTGCCCACAATGTCCGAGAACGTTTTTTGACAAATATGAATTGAAATATCACCAACGCCTTCACCAGGACATTGAAGACTTCTGTTGTAGTATTTGTGGGCGAAGGTTTAGTAGGAGATCAGGACTGAGAGCTCATATGAGAAAACACACAGGTGAAAAACCATACAACTGTGGAACATGTGGTAAGGCATTTGCTCATCTTAATTCCCTTAATACTCATGAAAGAGTTCATACTGGTGAACGACCATACAAATGTAATTATTGTGTACGGACTTTTGCTCAGTATTCAACTGCTAAGGCTCATGAAGAGATGCATATGGGTGGTCTAAGATTACACCAATGTGATGTTTGCGATCGGATGTATAAAACTGAAGCAGATCTTAGAGCACACTATGTGACACATGAAGGAAGCTTTGATCATCATTGTGCTCAATGTAATAAGGGTTTTAAAAAATCAATTGATCTCAAGAAACATAATATAAGGTTCCATTTTGAAAAGAAGCCTTTTGCTTGTACTGAGTGTAGCAAATCATTTGTTTTAGCAAGTGAACTAGAAGGACATATGACACTACATAGAGGACAGTTTCCATTCTCTTGTACAATGTGTTCTAAAAGGTATAGGTTAAAATCTACTTTAAGAAAACATGTCGAAAAACACCATAGTTCCAATCAATTAAATGAAAATTCTAAAGAATTAGATTCCAATCCTGGATTGGATCCAAATAATATTAGTTTAAATATTTTTGAAGATGGTACTTCTTAA
Protein Sequence: MDNGIDERCRLCLSNDIIEESIFEPRDDEASFCTKIMICTGVMVSSEDEYSKYICNHCADMLELMYDFRKRCFKTYISLNSTLNAVPENSNILEIQNDQTAVYDRIVDRLRKSPTSETVNDKESDLGIDRVVSEEVVFDDDSGKETFTERQFQVGCYVPFLEDDPEKEFPLMRRFKCTTCKNVFSSINELDEHWDICADLVGNDDSMRDFMNVDTGDENIIYEDEVDESGNDDDCQIGKKKTKNKEFCCETCGQIFKQLWLLTRHKQVKHVCERPYSCPQCPRTFFDKYELKYHQRLHQDIEDFCCSICGRRFSRRSGLRAHMRKHTGEKPYNCGTCGKAFAHLNSLNTHERVHTGERPYKCNYCVRTFAQYSTAKAHEEMHMGGLRLHQCDVCDRMYKTEADLRAHYVTHEGSFDHHCAQCNKGFKKSIDLKKHNIRFHFEKKPFACTECSKSFVLASELEGHMTLHRGQFPFSCTMCSKRYRLKSTLRKHVEKHHSSNQLNENSKELDSNPGLDPNNISLNIFEDGTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -