Ofas016191.1
Basic Information
- Insect
- Oncopeltus fasciatus
- Gene Symbol
- -
- Assembly
- None
- Location
- Scaffold108:547257-573450[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 29 3e-05 0.0018 18.7 1.4 1 23 154 176 154 176 0.96 2 29 3e-05 0.0019 18.7 1.4 1 23 192 214 192 214 0.97 3 29 0.0085 0.52 10.9 1.3 1 23 236 259 236 259 0.95 4 29 0.003 0.18 12.4 2.7 2 21 266 285 265 288 0.93 5 29 0.02 1.2 9.8 1.1 1 23 395 418 395 418 0.93 6 29 0.0023 0.14 12.7 0.8 1 23 449 472 449 472 0.94 7 29 0.3 18 6.1 0.3 3 23 480 501 479 501 0.96 8 29 0.0023 0.14 12.7 0.3 2 23 575 597 574 597 0.95 9 29 3.2 2e+02 2.8 0.9 1 23 617 640 617 640 0.91 10 29 0.018 1.1 9.9 0.1 2 23 647 670 646 670 0.88 11 29 0.0094 0.58 10.8 0.1 2 23 679 701 679 701 0.95 12 29 0.00062 0.039 14.5 0.7 1 23 707 730 707 730 0.95 13 29 0.0018 0.11 13.0 2.5 1 23 738 760 738 760 0.97 14 29 0.0045 0.28 11.8 1.1 2 23 821 843 820 843 0.95 15 29 0.0011 0.067 13.8 3.1 2 23 850 871 849 872 0.95 16 29 0.0057 0.35 11.5 3.1 1 21 892 912 892 913 0.95 17 29 0.00033 0.02 15.4 3.8 1 23 932 955 932 955 0.97 18 29 0.059 3.6 8.3 1.7 1 23 958 981 958 981 0.97 19 29 0.059 3.7 8.3 1.7 2 23 988 1009 987 1009 0.96 20 29 1.3 81 4.1 4.4 1 23 1016 1039 1016 1039 0.93 21 29 0.0029 0.18 12.4 2.5 1 23 1076 1098 1076 1098 0.98 22 29 0.0057 0.35 11.5 0.9 2 23 1104 1125 1103 1125 0.95 23 29 0.00034 0.021 15.3 0.5 2 23 1193 1215 1192 1215 0.96 24 29 0.03 1.9 9.2 0.6 2 23 1289 1311 1289 1311 0.96 25 29 6.4 3.9e+02 1.9 0.8 2 23 1352 1373 1351 1373 0.91 26 29 0.083 5.1 7.8 6.2 1 23 1385 1408 1385 1408 0.93 27 29 0.0017 0.11 13.1 0.3 1 23 1442 1464 1442 1464 0.98 28 29 0.00048 0.03 14.9 1.8 1 23 1470 1493 1470 1493 0.94 29 29 0.054 3.3 8.4 0.5 1 20 1498 1517 1498 1519 0.93
Sequence Information
- Coding Sequence
- ATGGAAAACTCTGCACTTAAAAACTATGAAGAGCTTTGTAGACTTTGTGCCAGCTATGATGCTATTAAACTACCAATATTTAGTGACAGAGGGAGGGAGAGGAAACTGAAAGATAAAATAACTACCTGTCTACCATTTGATGTATCAGAAGATGATTTGTTACCTAAATCATTATGTTACCGGTGTATATATAATTTGGAAAACTTTTATGATTTCCGGCGTGGATGTATTGATGCAAGAAGCAGGCTGGAAAAAGTTATTAAAGAAGTATTAAATACTAAGGTGGATGGGAGTATCATAAAATTGGAAGATGCGTCAGTTGATGAGCCTCACCTAGAAGATGATATTATTGAGTCAGATGGTGAGGGTGACTGCCCCAACCCTGCTGATTTCTTGGAAGCATGTTTGGGTGAATCACCTCATCATAATTCTCGGACAGGGGAAGAAGAAGAAGGAGGTTATCCTTGCAAAATTTGCAATCGGCAGTTCAACTCCAAATCATCCCTGACAATTCATGCTAAATTCCACCAAGACATATCTGGTGCTGGTGGACATGAAGTGGAAAAAGAAAATTTCTCGTGTTACGTATGTGACAAAGTTTTCTCGAGTAAGGGACACTTAGCTCTCCATTCCAAGGTGCATATTGGAGAAGGATCAACTCCAGTCACTAACTGCAACAGATCTAACCCAACTAACTTGAAACTTCACCGCTGTGATTTATGCAGTAAATCATATTCTGGAGCGAAACATTTGTGGGGTCATGTTAGCTCAGCTCACAAAGGTCATCCTTCACTCACCTGTGGGCTCTGTCAGAAAACTTTCTCATCTATCTCTAATCTTGAGGATCATAAAAGGTGCAAACACAAAGATGAAAACCTAGTTGATGAGGTTTGCATTTCACCTGTCATTGTCGAGGATGATTCAAATACAGAAAAGCAAACAGAAGACATATCATCTAGTAGGAGAAAAAGCTCAAAGCCTCGGAAGATTGAAAGGGATGGAAATAGTTCTGAATTACTGAACGTAATTGTGAATTCTAATTCTGATTCTCAGAATACTCAACTTAATTCTTTTTCCGAGAACCATTCTTTACAAGAAGATACAAATCTAAATTTTTGTCAAAGTTCTGAAGAAAAATTTACTGACCAAGTTCATTTTAAACATGATATACAGATTCCTTTCTACTCCTGTATGTTTTGCCCTGAACGTTTTCGGAAAACTGATTATTTGAGTCAACATTTGATTGATAAGCATAGGTATGATGGACCACTAAATTTCTGTAACAATGAGCGAGCTGATTATGGAGAAGAACTAGCTGAAAGCATGATGGAATCAGAAACTGTGTTCTGTTGTGAAATTTGTGTCCGGGAATTTAGTGACAGAGGTAGTCTCTGGCTTCACTTGCTGTATACTCACAAGAATGCTGCTTCTAAAGCTTGTGGTATCTGCCTCAAGATTTGTGAGGATACTGAGAGCTTGCTAAATCATGTAAAGTCAGCTCATCCCTCAGGTCGAGGGGATTCTAAATCAGAACAGAGGCGATACACGTGTCAAGTTTGTGCCAGGCAACATGATTCTCGCAAGAAGTTAGTTACCCATGCTAAAATACACAAATTAGTTGATGCTGATGGCAATTTGGTTGATCCAGAAACGGTAGTTGTTCAGAATACAGAATTTTATTCAGATGGCTACATCCCACATCCATTAGATGATAATTATATAAGCTGTGAATTGTGCTTTAAAGTTTTTGATAGTGAAGGGAAATTAATGAAACATAAAAAGATTGCTCATAGAGATTCACTTGGAATCTTAAATAATTCATTAGGTCCTGTAACTAACAGCTTTTATTTTGCTTGTGAAATATGTGGTTTGTCCCATCTTTCAAGATCAGAAAGATGGAAACATATGTCAACAACACATGCTGGAGACTCAGCTGTTACATGTGAGGTACCAGAATGTGGCAAAGTATTTCCTACCAGCTCATTGAAAAATGATCATGCAGCTCATCATGCTGCTCAAGGCCAATATCCCAATACTTGTGAAGTTTGTGGGAAAATGTGGAAAACTCGTGTTGAGTACTGGAAGCATATGATGGGTGTTCATCCTGATTATTTACCTTTTATTTGTGGGGTTTGTCTTAAAGTCTTTTGTAATTTAACTAACTTAGTTAACCATGTTAGAGAAAACCATTGGCCCCTACTGGGTGGTGATTTTTGCTGTGATATATGTGGTAGACCTTATTCTAAAGTGTCTAAAATGAGCCGTCATCGAAAGGTGCATTATGTTCCAGGAAATCCTCCAGAACTACAGGCCCTTCTCGATAATCCAAAGGTTCAAAATGAGCCTCATTTCCTTCAACAGGCATCCAACCTTGTTTGTGATTTATGTGAAACCAGTACTTATGAGTATGAAAGTATTGAACTTCTTGGAAAACATAGGCAAGAGGCTCATAATGTTATGCCTTGTGATTTATGCACTAAGTATTATGGAAGAACTTCACATCTCTGGAAACACGTAAATAAAATACATAAAGGACATCCAGATGTAACATGTCCCACTTGCCAGCGGACATCTGCATCCAAATCCCACTTATCCACACATATTGCAAAACACCACCGAACTGAAGAACGTGAGCCACACACTTCTCGATCTTCAAAAGAACCCACTGGCACTCACACTTGTGATAAATGTTCTAAAATATTCAGAAAAGAATCTCTTGTAAAGAAACATATCAAACATTGCAAAGGCCCTAGACCAATGCCCATTCCAATTCCTCCGCCAGTAAATGGTGTTTACCAGTGTGACAGGTGTGATAAATCATTTAGTGGTAGAAATCTTTTGTACAAACATTTAAAGCACTCACATGTATTTTTTAGCTGTGAGCTTTGTGAAACTAAAACTAATTCAAGGACTGAGCTTTATGAACATATTTGCTCAGTTCATTCTGATGACCCTAAAGTAAAGTGTGACAAATGTGATAAAATTTTACGTTGCAATGCAGATCTTGAAAGACATCGAAAAGGACATAATTTAAGTTTTCAGTTGCATTGTTGTAAATTTTGTGCTGAATTGGTTACTAGTAAGTATAAACTAAGACGGCACTTAAAAGCTATACATGGAAATGAAAGCAAATACTTATGTGCATTATGCTTAAAAGCATTACCTGGAATTACAGAATTAAGAATACACGTAGAGGCAAACCATAAAGCTAATTTGGAGAGAGGATTCACCTGTCAAATTTGTGCCAAGCCTTGCCAGAACAAATCAAAATTGATGGAGCATATTAAGTATCATGGTTCAAATTTCCTTCCATGTAAAATTTGTCTAAAAATATTTTGTTCGAGGGAAGAGTTAGATACCCATTTAGAAAACCATCCTAATGATAGTGCTGAAGAAGATGAGCAAATGGACGGGGCAGATGTAGATTCAATTACCAATAAGGATTCTAATATATCAGAAGAGACTGAAGCAAAAGAAGAAGAGGAGGCTGAGGAGGGAGATAAACGTAAGGCTGATGAAGGCAGTGAAGATATAGAGGATGAAGAGAAACCAAGAAAGAAGTCTAAGTTAGAAGTTGAATGTTCTGAATGTTCAGAAATTTTCTACTCGAAAATGACTCTGAGGCGCCATTTGAAATCTGTACATGACATCAAGCCGATCATTAATAGAAGCTACTGTGAAAGAAGAGATTCAACTGTGTTAGAAACTACTGCAACTGATCAAACTTATATGGAAGAATCGGACAAGAGCCATTGGGATACTGTAGGGGACTCTGATAAGAGTTTCATGCATCAGTTAGGATTAATGCCCGAAACAAAATCAAAGCAAATTCGAAAGGTATATAATGATGATGAATCTCCTGCTCAGTGTGATCTCTGTGGAAAAGTATGGTCGGCAAAGAAGCATTTATGGCAACACTTGATCAGGTATCATAAAAATGAATGTGGAAGGACCTGTGGTGTATGTCTCAAACTCTGTCCTGATTACCCATGTCTTAGTGCACATTTAGCCATTGAACACCCAGACAACTTTGAAAATGACACTTCTATTCTAATTTGTCGAGTATGTGGTAAGTATCATAATGCAAAGTCCAAATTACTCAATCACGCCAGTGTTCATGTAGGCCATGAAGAGAGAGCTATCGACCCCAAACATCACTGTTTGATTTGTAAAAAAGTATTTTCTGAGTTTTCCCAATTTTGCTCTCATCTTCAAGCTGATCATAATATTGCTGGTAAGGAAGTTGAGCCCAGAATCCTTGAAGCAGAGGATAGCATTGCTACTGAAAATACTCTCAGCAGGGTTCAAAGCAAATTGCCATTTCATACATGTGAGGTATGTTCACTGGTATTTGCTAGTGAAATAGGACTAACAAATCATAAAAGGATTCATGAAAATTCAGACAATTTCAAGTGTGGTCAGTGTGGTGAAGTTTTTCAATCAGCTGAAAATCTGTGTACTCATAAACTTCAGAAGCATAAAGGCACAGAATTTGTATGTGCTGATTGTAAATCCAATTTTTCTACCTATAACCAATTAACAGAACATAATAAGCTCTGTAAAATGAAATTAAAAAATATGGATGATAATTCAGATGATGATGAGCTTTTATTGGATGACGATATTGAGGAATTAGAAAATTCCTATGATGTAAATGACACTATTATGTCATCTGAATCTGATGAAGACAATATAGATAAGTCTGAATTAGTGGATGAAAATTATTTGGAAAGTGATGGCTCTCTTAGTAATGTTGATGAAAAATCTAATATTTCAGAAGAAATAATTAATGAAAAGTCTGATTCTTTTAAACAAATTTTGTTAGAGAATAAAGCAAGTAATTTTGAGAACTCAAACTCATAA
- Protein Sequence
- MENSALKNYEELCRLCASYDAIKLPIFSDRGRERKLKDKITTCLPFDVSEDDLLPKSLCYRCIYNLENFYDFRRGCIDARSRLEKVIKEVLNTKVDGSIIKLEDASVDEPHLEDDIIESDGEGDCPNPADFLEACLGESPHHNSRTGEEEEGGYPCKICNRQFNSKSSLTIHAKFHQDISGAGGHEVEKENFSCYVCDKVFSSKGHLALHSKVHIGEGSTPVTNCNRSNPTNLKLHRCDLCSKSYSGAKHLWGHVSSAHKGHPSLTCGLCQKTFSSISNLEDHKRCKHKDENLVDEVCISPVIVEDDSNTEKQTEDISSSRRKSSKPRKIERDGNSSELLNVIVNSNSDSQNTQLNSFSENHSLQEDTNLNFCQSSEEKFTDQVHFKHDIQIPFYSCMFCPERFRKTDYLSQHLIDKHRYDGPLNFCNNERADYGEELAESMMESETVFCCEICVREFSDRGSLWLHLLYTHKNAASKACGICLKICEDTESLLNHVKSAHPSGRGDSKSEQRRYTCQVCARQHDSRKKLVTHAKIHKLVDADGNLVDPETVVVQNTEFYSDGYIPHPLDDNYISCELCFKVFDSEGKLMKHKKIAHRDSLGILNNSLGPVTNSFYFACEICGLSHLSRSERWKHMSTTHAGDSAVTCEVPECGKVFPTSSLKNDHAAHHAAQGQYPNTCEVCGKMWKTRVEYWKHMMGVHPDYLPFICGVCLKVFCNLTNLVNHVRENHWPLLGGDFCCDICGRPYSKVSKMSRHRKVHYVPGNPPELQALLDNPKVQNEPHFLQQASNLVCDLCETSTYEYESIELLGKHRQEAHNVMPCDLCTKYYGRTSHLWKHVNKIHKGHPDVTCPTCQRTSASKSHLSTHIAKHHRTEEREPHTSRSSKEPTGTHTCDKCSKIFRKESLVKKHIKHCKGPRPMPIPIPPPVNGVYQCDRCDKSFSGRNLLYKHLKHSHVFFSCELCETKTNSRTELYEHICSVHSDDPKVKCDKCDKILRCNADLERHRKGHNLSFQLHCCKFCAELVTSKYKLRRHLKAIHGNESKYLCALCLKALPGITELRIHVEANHKANLERGFTCQICAKPCQNKSKLMEHIKYHGSNFLPCKICLKIFCSREELDTHLENHPNDSAEEDEQMDGADVDSITNKDSNISEETEAKEEEEAEEGDKRKADEGSEDIEDEEKPRKKSKLEVECSECSEIFYSKMTLRRHLKSVHDIKPIINRSYCERRDSTVLETTATDQTYMEESDKSHWDTVGDSDKSFMHQLGLMPETKSKQIRKVYNDDESPAQCDLCGKVWSAKKHLWQHLIRYHKNECGRTCGVCLKLCPDYPCLSAHLAIEHPDNFENDTSILICRVCGKYHNAKSKLLNHASVHVGHEERAIDPKHHCLICKKVFSEFSQFCSHLQADHNIAGKEVEPRILEAEDSIATENTLSRVQSKLPFHTCEVCSLVFASEIGLTNHKRIHENSDNFKCGQCGEVFQSAENLCTHKLQKHKGTEFVCADCKSNFSTYNQLTEHNKLCKMKLKNMDDNSDDDELLLDDDIEELENSYDVNDTIMSSESDEDNIDKSELVDENYLESDGSLSNVDEKSNISEEIINEKSDSFKQILLENKASNFENSNS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -