Basic Information

Insect: Oncopeltus fasciatus
Gene Symbol: su(Hw)
Assembly: None
Location: Scaffold1502:220033-253217[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.0025 0.15 12.6 0.9 2 21 117 136 116 137 0.93

2 13 0.0082 0.51 11.0 0.9 1 23 212 235 212 235 0.97

3 13 3.8e-05 0.0024 18.3 1.2 1 23 240 262 240 262 0.98

4 13 3.1e-05 0.0019 18.6 1.1 1 19 268 286 268 289 0.95

5 13 2.8e-07 1.7e-05 25.1 0.3 1 23 300 322 300 322 0.97

6 13 0.0022 0.14 12.8 1.8 1 23 332 354 332 354 0.98

7 13 3e-05 0.0018 18.7 3.3 1 23 360 382 360 382 0.98

8 13 2e-06 0.00012 22.3 0.4 1 23 388 410 388 410 0.98

9 13 8.3e-06 0.00051 20.4 3.0 1 23 416 438 416 438 0.94

10 13 5.1e-05 0.0032 17.9 0.9 1 23 450 473 450 473 0.94

11 13 4.7e-07 2.9e-05 24.3 0.7 1 23 479 501 479 501 0.98

12 13 8.1e-07 5e-05 23.6 1.4 1 23 507 529 507 529 0.98

13 13 3.4e-06 0.00021 21.6 2.0 2 23 536 558 536 558 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.0025	0.15	12.6	0.9	2	21	117	136	116	137	0.93
2	13	0.0082	0.51	11.0	0.9	1	23	212	235	212	235	0.97
3	13	3.8e-05	0.0024	18.3	1.2	1	23	240	262	240	262	0.98
4	13	3.1e-05	0.0019	18.6	1.1	1	19	268	286	268	289	0.95
5	13	2.8e-07	1.7e-05	25.1	0.3	1	23	300	322	300	322	0.97
6	13	0.0022	0.14	12.8	1.8	1	23	332	354	332	354	0.98
7	13	3e-05	0.0018	18.7	3.3	1	23	360	382	360	382	0.98
8	13	2e-06	0.00012	22.3	0.4	1	23	388	410	388	410	0.98
9	13	8.3e-06	0.00051	20.4	3.0	1	23	416	438	416	438	0.94
10	13	5.1e-05	0.0032	17.9	0.9	1	23	450	473	450	473	0.94
11	13	4.7e-07	2.9e-05	24.3	0.7	1	23	479	501	479	501	0.98
12	13	8.1e-07	5e-05	23.6	1.4	1	23	507	529	507	529	0.98
13	13	3.4e-06	0.00021	21.6	2.0	2	23	536	558	536	558	0.96

Sequence Information

Coding Sequence: ATGAGCAAAAAAAGTGTTAAAACTTACTCGGGAAAGAGAACACCTCTGAGAAACAGCACTAAAGGAGGTAATATATTAAAAGAACCTTCTCCTGTCACTAAAACTGATGTAGTACCTAATGATTCTCCTAAAAACAATGGGGAAGCTCTGCCTAGCACTCCGAGAAGATCACTCAGACATAATAAAGAGGATCAAGCTAAAGAAGCGAAAGAAAATAGACAAGTTGGAAAAAAAGGATCCAGAAATTCCAAACCTAAGGAAATTGAAAAGACTAAGAAAAGTAGCTTAAAACAGTCCCCTAAAGCTCCTAAAACTAAGGAAACTAGAGAAGATGCCAAAGAGGAAAACAAGTGTAATACCTGTTCCAAAACATTTAAATCAGTGACTGGTTTAAAAATTCATGCTAAAAAGTGTATCGATTCTGCAATGGAAGTAATCAATGCAGTTATCGAGAATGTAATGAAGACAGAAAAAGTAGAAACATCTCCTGAGGCTTATCCCAATGTATCTGAAAATATGAAAAACTCTGAAAAGAAAAAAGAACCTGTTCGTTTGCCAAATGAGCAAACGATTGCAATTTCTCAGTGTTATTGCTGTGGAGAAGATTTAGAAACTGCTCATAAAACTGGTGAATTCCAATGCTACAACTGTAACAAACTATTTTTGCTGAAAGCATCCCTTGAACGTCATCAAAAAGTTATCCACATGGGAGAGAGTCATGAGTGCCCTCAGTGTGGAGCTAAATGCCCAGATAAAGGAACCCTTGCAAGACACATGTATACCCACACAGGGTTCAAGCCATATTCTTGTCCTGTGTGTAAACAAGAGTTTTCTCGTAAATACCACCTTGTCAGGCATAACATGCAGACTGGATGTGATGGTAAAGAAAAACCTGTTTTCCCTTGTCAGGTGTGTGGGCGAGAATTCAATCGCAAAGACAATCTAAGAGAACATCTGAGAGCTCATGCTGGGCAGACTAAACGAAAAAAAATCTTCTCTTGTGATTCTTGTGGAATGGAGTTCTGTGGAACCAATTTGCTACAAATTCACAAAAGAACTCATGCAGGTGAGAAGCATTACTGTTGTGATTTTTGCCCTAAGAGATTTCCTTCTAGTGGAGCAATGAAGAAACATCGGAGAACTCATACTGGTGAGAGGCCATTTGAGTGCTCCACATGTGGGAAGCGGTTTGCAGCTAAGGAAACTTTGAACCGTCACGTAAGGATCCATACAGGATACAAGCCTCATGCCTGCCAATACTGTGGGAAACGCTTCATTCAGTCTTCTCAACTGAGGTCTCATCTTTTCTATCATACAGGGCAGAGTGTTTTTCAACCAGCCGAAGTGTTCATCTGTGAACTTTGTGGAAAGACATTTAACCGAAGAGCTCGTTTGAATGAGCATACTAAATTTATTCATTTGGGTGCCAAACCATTTGAATGTGAGCAATGCAAGAAGACCTTCATTAGGAAAGAAGATCTTAACAGACATCTGATTATTCATTCTGGAATAAAAGCCCACACATGCCCAATATGTAGCAAATCATTTGCCATGAAGTCTTCTTTGAAAGTTCATCTACTGACTCATACAAAAGAGCCCCCAAGATCCTGCGATGAATGTGGACGAGCTTTTATCAGACAGGACTGCCTCCTGCGCCACATGAGAAACAAACACAGAGATATGCTTGAAGAAATTAGAAGTGAAGCAGAAAAGAAAAAATTACAGCAGCAGTTACTCCAGGTTGCAGCAGAAGCAAGTCTTGTCGAGGGCATGGAAGACAAAGGTGAAATGGATGAGCGTGGCTTGATGGATGCTGTCTCAGAACTTCTTAATCTTCTAGTGGATGAGGCAACATTGAAAGGACTCGGCTGGCCTAAAGAGGGGGTGGAGACAGTTTTGGAGTCTGTGATCAGGAGATGTGGTCATGATCCTGCCCCTCGTACCACCCCATCACACGAGCGTCTTCGCCACAATGTGAAACTCCTGTTTACAGTTGTAATAGATGACTCAGCCATCAAAGCCCTTCTGAACAATCAGACGATAGATCAGGTTATTCTTCATGTCCTTCGTCTTGCCAAGTCCTAA
Protein Sequence: MSKKSVKTYSGKRTPLRNSTKGGNILKEPSPVTKTDVVPNDSPKNNGEALPSTPRRSLRHNKEDQAKEAKENRQVGKKGSRNSKPKEIEKTKKSSLKQSPKAPKTKETREDAKEENKCNTCSKTFKSVTGLKIHAKKCIDSAMEVINAVIENVMKTEKVETSPEAYPNVSENMKNSEKKKEPVRLPNEQTIAISQCYCCGEDLETAHKTGEFQCYNCNKLFLLKASLERHQKVIHMGESHECPQCGAKCPDKGTLARHMYTHTGFKPYSCPVCKQEFSRKYHLVRHNMQTGCDGKEKPVFPCQVCGREFNRKDNLREHLRAHAGQTKRKKIFSCDSCGMEFCGTNLLQIHKRTHAGEKHYCCDFCPKRFPSSGAMKKHRRTHTGERPFECSTCGKRFAAKETLNRHVRIHTGYKPHACQYCGKRFIQSSQLRSHLFYHTGQSVFQPAEVFICELCGKTFNRRARLNEHTKFIHLGAKPFECEQCKKTFIRKEDLNRHLIIHSGIKAHTCPICSKSFAMKSSLKVHLLTHTKEPPRSCDECGRAFIRQDCLLRHMRNKHRDMLEEIRSEAEKKKLQQQLLQVAAEASLVEGMEDKGEMDERGLMDAVSELLNLLVDEATLKGLGWPKEGVETVLESVIRRCGHDPAPRTTPSHERLRHNVKLLFTVVIDDSAIKALLNNQTIDQVILHVLRLAKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01309627;
90% Identity: -
80% Identity: -