Ofas013273.1
Basic Information
- Insect
- Oncopeltus fasciatus
- Gene Symbol
- Smarcc2
- Assembly
- None
- Location
- Scaffold530:82818-101929[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7e-15 2.9e-12 46.6 0.2 3 44 285 326 283 328 0.95 2 2 8.6 1.5e+04 -3.7 0.1 8 18 532 542 531 543 0.86
Sequence Information
- Coding Sequence
- ATGTATAGTCATACAGACGAGACACTGATAAACTCATTTGATTATAAATACAACTTTCCAAGAATATCCTATTCTAGTACTTTTTTTTTCCTGACTAGTGTTGGACTCATCACGGGGAAGAAAGATAGTGAATGTCTCCCAGTTAAGACAGGGACAATGATGGATCTTGACGAGGAAGTGCCCGACCGAAATGAGGATAGTCAACAAGGAAGGACCTCTGATACCACAAATACACAGACATCAAATGTAGCGGAACCTATGCCCCCAAAAGAAGATGGACAGGAAGATAATGTTACAGAACAAACCCATCACATCATAGTTCCTTCTTACTCAGCTTGGTTCGATTACAATTCTGTACATACTATCGAAAAAAGAGCGTTGCCTGAATTCTTTAATAATAAAAATAAATCCAAGACACCTGAAATTTATCTTGCCTATCGTAATTTTATGATTGACACATATCGATTAAACCCAACAGAGTACCTTACCTCTACAGCTAGCCGGAGAAATTTAGCTGGTGATGTATGTGCTATAATGAGAGTTCATGCCTTCCTGGAGCAATGGGGACTGATAAACTACCAGGTTGATGCAGATAGCAGACCAACACCAATGGGACCTCCACCAACTTCTCATTTCCATGTTCTTGCTGACACACCATCGGGGCTCATGCCTGTAAATCCACCCAAAACCCAGCAACCCTCAGCTGCTAAAACTCTTCTTGATATGGGGCAGACCAATAAACCTATGATCAAATCAGAGCCTGAACTTGGAAGTAATTTTGGCCTTAAATTGGATCAGTATGCAAAGAAACCAGCTGTATTAAAAAATAAGCAAGCTGCATCTGTAACTAGAGACTGGACTGAACAGGAAACTCTCTTGTTATTGGAAGCGTTAGAGCTATATAAAGATGACTGGAATAAAGTATGTGAGCATGTGGGTTCCAGGACTCAGGATGAATGTATTCTACATTTCCTTCGATTACCAATTGAAGATCCTTATCTAGAAGACCACGAAGCAGGTTGTGGAGCACTAGGACCATTGGCTTATCAGCCAATTCCCTTTTCCAAAGCTGGAAATCCCATTATGTCAACAGTTGCCTTTTTAGCGTCAGTTGTAGATCCTAGAGTTGCTTCATCTGCTGCCAAGGCTGCCATGATAGAATTTGCTAATATTAAGGATGAAGTTCCTGCTGCTCTTCTTGATCAACACATTAAGAATGTTGAAGCTTCTACAGCTGATGGGAAGTATGACCCTTCAGCTGGTTTATTGCAGAGTGGGATTGCTGGAACTGCTCCAGAAAAAGAAGATGAGTCAGAAAAGGAGAAGAAAGAGGTGGGCGAGGGAGGCGAATCAGGTGGCAATGATGCTGTAAACAAGTCTGAGAAGGAGGGGGCCAAATCTGAGGAGGATGTCCCAACTGCAGTAAAAGGGGAAGAAGGTGCAGATGAAGAGGGTAAGGACAAAGAAAATGAAGAGCCTCCTTCTAAGGAGACAGCTGAGCGAGAGCGGCTAGTCAAGGATGCTCAATTACAATCTGCTGCTGCTGCAGCTCTTGCTGCTGCTGCTGTTAAAGCTAAGCATCTCGCTGCTGTTGAAGAGAGGAAAATAAAATCACTTGTTGCCCTCCTTGTTGAGACTCAAATGAAGAAGCTTGAGATCAAGTTGCGACACTTTGAGGAACTCGAGACGACAATGGAAAAAGAACGTGAAGGGCTTGAATACCAGCGTCAGCAACTAATTGCAGAGAAGCAACAGTTTCATCTGGAACAATTAAAGGCTGCAGAATTCAGGGCCAGACAAGAAGCAGTGCGCCGTCTAGCAGCAGAGCAGCAGCAGATGCCTGCTTCCCCTGCAGCCACCCAGCCACAACCTGCACCTCAAACACCCCAGCAACTACCCCCACCTCCTCCACCACCCTCAACAGTAGTACAGTGA
- Protein Sequence
- MYSHTDETLINSFDYKYNFPRISYSSTFFFLTSVGLITGKKDSECLPVKTGTMMDLDEEVPDRNEDSQQGRTSDTTNTQTSNVAEPMPPKEDGQEDNVTEQTHHIIVPSYSAWFDYNSVHTIEKRALPEFFNNKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTASRRNLAGDVCAIMRVHAFLEQWGLINYQVDADSRPTPMGPPPTSHFHVLADTPSGLMPVNPPKTQQPSAAKTLLDMGQTNKPMIKSEPELGSNFGLKLDQYAKKPAVLKNKQAASVTRDWTEQETLLLLEALELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGCGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVASSAAKAAMIEFANIKDEVPAALLDQHIKNVEASTADGKYDPSAGLLQSGIAGTAPEKEDESEKEKKEVGEGGESGGNDAVNKSEKEGAKSEEDVPTAVKGEEGADEEGKDKENEEPPSKETAERERLVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLIAEKQQFHLEQLKAAEFRARQEAVRRLAAEQQQMPASPAATQPQPAPQTPQQLPPPPPPPSTVVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -