Basic Information

Gene Symbol
XBP1
Assembly
None
Location
Scaffold495:370315-379960[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-15 1.2e-12 47.7 10.1 2 63 54 115 53 117 0.97
2 2 0.00014 0.12 12.4 2.6 25 60 91 126 90 128 0.89

Sequence Information

Coding Sequence
ATGAATATTCTAAAGTACAATAAAATCTCTCCTGTACGGGATGAGGTTCGTGAAATGCTTATTGCATCAGCTGACTACTCAGCAATTGCAGAACCACAAGAAATATTGCAACAACCTAACTCACGAAAGCGTCGTGGTTCTCTTTGTGGATTGACACTTGAAGAAAAAATAAGGCGAAAGAAACTTAAAAATCGAGAAGCCGCCCAGAGTTCAAGGGATAAGAAGAAAGCATATGTTTCCAGTCTTGAAGATTCTATATCTTTATTAAAAGTTGAGAATGATGTATTAAATAAAAAAATAAATCAGCTCCTTGAAGATAATGAGAAGTTAAAAGAGAAAAATGAAATCATTGAACGGCAACTGTTGGAGCTCAGTGTTGCTAGGGGTAAAGAAAGGTCAGCAGTGCCTAATCCTCAGCAGAAGGAACATGTACCCCTCCTAGCTCTGACTGTAACAGTTGTTTGGATTCATATTTTGACCTCGGTGATTTTGACTGGCTCGAAGAAACATGTCAATCAGTTGACCTCAATGAGCTCTCCAAATTGGCTGAATCACTTGCAGAAAGAGCTATGGAATTGGAGACAGAAGAAGCCAAGGGTGAAGTGGTGGGGACCAGGCCAGAGAGCATGGAATCCTCTGGGTTTGATTCAATTATTTCACAAGGCAGTGTTGATTTGA
Protein Sequence
MNILKYNKISPVRDEVREMLIASADYSAIAEPQEILQQPNSRKRRGSLCGLTLEEKIRRKKLKNREAAQSSRDKKKAYVSSLEDSISLLKVENDVLNKKINQLLEDNEKLKEKNEIIERQLLELSVARGKERSAVPNPQQKEHVPLLALTVTVVWIHILTSVILTGSKKHVNQLTSMSSPNWLNHLQKELWNWRQKKPRVKWWGPGQRAWNPLGLIQLFHKAVLI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-