Basic Information

Gene Symbol
Cebpb
Assembly
None
Location
Scaffold544:295499-302746[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 4.3 3.7e+03 -1.9 0.3 43 58 27 42 25 48 0.57
2 2 3.2e-16 2.8e-13 49.7 10.1 3 63 143 203 141 205 0.95

Sequence Information

Coding Sequence
ATGGACTCTCCGCAGCTATATGACAGTCCGCTGGACGCCGGGAAAAAACCCCACATCGTCCAGCAGATTCACCCTCAGCAGCTGAGCGGACAGCAGCAGCTCCTGCAACAGCAGCCCAAGAGATACACGGAACTGCACGACCTCAATTCTCCGGAGATATCTCTGGATTTGCAAAATTTGATTGACGACTCACAATTTGGCGATGGGATTTTCAATGACATCCTCCAACCAAAGCCACAGGTCTCAAACCACCAGCCTTCCAGATATCAGAGGCTCTCATATGTCCCTCAGCCTGTACACTTTCAACCTTCGGATATCAAAGAAGATCCGGATTCGTCAAATGACTTTGGGCGCTTTCAAAATTTTGCTTCGCCTATGTTGAAGAACCAACTCCGGAAGCACTCCAAGTCCATAGACAAGAATACTGATGAATACAAACGAAGGCGCGAGAGGAACAACATTGCTGTGAGGAAATCTCGGGAAAAAGCCAAAATGAGGACTCGGGAAACCGAAGAAAAAGTGAAAATTCTCATGAAAGACAACGAACGTCTTCAGAAACGCATTGAACTTCTGACGGAAGAACTGAATGTCTTACGGTCGCTGTTCAGCAGTGTTGGAGTCCTTCCAGACCACCTCCACAGAGAAATCAACAAGCACTTAGAAACTTACCAGCAGCACTGA
Protein Sequence
MDSPQLYDSPLDAGKKPHIVQQIHPQQLSGQQQLLQQQPKRYTELHDLNSPEISLDLQNLIDDSQFGDGIFNDILQPKPQVSNHQPSRYQRLSYVPQPVHFQPSDIKEDPDSSNDFGRFQNFASPMLKNQLRKHSKSIDKNTDEYKRRRERNNIAVRKSREKAKMRTRETEEKVKILMKDNERLQKRIELLTEELNVLRSLFSSVGVLPDHLHREINKHLETYQQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00757094;
90% Identity
-
80% Identity
-