Ostr032047.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Oligia strigilis
Gene Symbol
-
Assembly
GCA_951800025.1
Location
OX637569.1:268337-270673[+]

Transcription Factor Domain

TF Family
zf-BED
Domain
zf-BED domain
PFAM
PF02892
TF Group
Zinc-Coordinating Group
Description
The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 19 0.012 16 6.6 2.7 18 43 9 31 5 32 0.93
2 19 0.012 16 6.6 0.4 17 44 36 60 32 60 0.84
3 19 0.0011 1.4 10.0 0.1 18 43 68 90 65 91 0.87
4 19 0.00016 0.23 12.6 2.2 17 44 98 122 95 122 0.91
5 19 0.0019 2.7 9.1 1.2 18 44 129 152 127 152 0.94
6 19 7.8e-05 0.11 13.6 1.5 15 43 157 182 154 183 0.89
7 19 0.0042 5.7 8.1 0.5 18 44 189 212 185 212 0.90
8 19 0.0031 4.2 8.5 0.8 17 44 219 243 213 243 0.86
9 19 0.017 24 6.1 0.1 18 44 254 277 244 277 0.84
10 19 1.1 1.5e+03 0.3 0.9 17 43 301 324 283 325 0.76
11 19 0.19 2.6e+02 2.7 0.0 15 27 358 370 354 384 0.80
12 19 0.068 94 4.2 4.2 17 43 405 428 397 429 0.89
13 19 5.9 8.2e+03 -2.0 9.7 11 29 428 446 420 458 0.69
14 19 0.021 29 5.8 6.2 13 43 459 486 450 494 0.74
15 19 0.31 4.3e+02 2.1 2.6 18 44 493 516 488 516 0.84
16 19 0.53 7.3e+02 1.3 0.8 18 28 523 533 519 546 0.82
17 19 3.4 4.7e+03 -1.3 1.2 19 43 554 575 548 576 0.76
18 19 3.1e-05 0.043 14.9 2.0 5 43 604 641 603 642 0.85
19 19 1.4 1.9e+03 -0.0 0.5 16 40 660 686 651 702 0.75

Sequence Information

Coding Sequence
ATGTATCAGAATCAATTAGATTTCGTTTGCGACTACTGTTCAAGGACTTTCACAAGAAAATATAACTTACAAACTCATATTGAAAACTGCCATATAAACTCGTCATGCCACTGCAATATCTGTGGCCAGAATTTCGGCAGTCCGGCTGGGTTGGTCCAACACCTCTCCAGAGGCCATAACAACTATGGCCAGCCCTTCCCAGAATGTGAACTGTGCGGACGAATTTTTACAAGAAAACAGAACATTACATCTCATATGATAACTGTGCATCTACAAGGATTAGGGTACGAAATTCGGTGTCGGTTGTGCAAAAAAACGTTCACAACAGAACGGAATTTGAAAAGGCATATCAATCAGTTGCATAATCCTGATGTTGAGTATCCAACGTGTAACGATTGTCATAAAGTCTTTAGGGGGAAGCATTCGCTCATTGCCCACATACAGTCGGTACACAATGTGAGCGAAAGAGACGCTATCAAATGCCATTTGTGCGAAAAAGTGTACACGAATAATAGAAATTTGAAGCGTCATATAGAGATGTTTCATGGCGTAAAAGGGGAGTTTAAATGCGACATCTGCCCGAAAGTGTACACTTCGAATCAGAGCTTGAGACGACACGCAAGGACGCGACACAACACCGAGAGCCAAGAACATTTGACATGCAACTTCTGCATGAAAGTCATCATTGGGCGAGAGAATTTCGAAAGCCACATACAATTCCACCACCAAGACACTGAAATGGAAGCTAGATACGAGTTTGTATGCGAGTCTTGCGACAAAAGTTTCGAAGAAGAATTTTGTTTACGTCAACACATGAAATCAGAACACTCATTTAAAACCTTCTACAAGTATTGCAAGAAATCGTTGCTCAAACGCTACGGCATGGACACGCAACACATATACAATTGCGAATATTGCGACAATTCTTTCCTTACCGTCTATGAGTTAAAAGATCATATGCGCGTCAACCACGATACTGAGTACTCGCTCTCAACTTGCAACGTCTGTTTCAACAAGTTTTTTTGTAAAGAGACTAGGGCTGCGCATAGGAATGTGTGTCTCCCACCGCCAAACGTAAACACTTGCAGTCATTGCGACAAGCTTTTCACAGATATCTCAAGCTTAGAGTTTCATACGAGAATTTTTCACCCCCAAGCTCAAATCGCAGATTCCAACATATCATCTACAAACATAGATGAGGAAGCTGTCTCTTTCAAATGCGAACATTGCGACCGCATATATTACAGTGATAGATCCCTGAAACATCATATGAAGTTAAAACATACGTCCGATGAAGAAGTGGAATGCGAACTGTGCGGAAAAATTTGCAGTAACAAGTACTATTTGGCTTCTCATATAAAAATCGTTCATAATAACGACTCCTGGTCGAGATGCGAATACTGTGATAAACAGTTTAAATCGAAAAGAAACATCAGAAGGCATATTGAATATACTCATTTGGGAATGCAACGACACAAGTGTATCGAATGCGAGACCCTGTTCAAAGAGAAAAGGAGTTTGAGAAAACATGTTCGGACGAAGCATCCAAACTCGGCGGCGTTTCCTCAATGCCATATATGTCACAAACGATTCGAGTCGGCGAAGTCTTGTAAGATACATCTTAAATTGTTGCATTCTTTCAACATGAACACTTACCCGTGTCACCTCTGTTCTGTATCGTTCAGCTCCAACGAAACGTTAAATATACATCTAGAGACCAAACACTTAGCCGAAGATCAAATCTACAAATGCGAAGAATGTAACTTAGTTTTTAAAGGGCAGGAAAAGTTCGACGCTCACAACGAAGTCTGCCACGTCAATTTAGTCCCTACGATCAAGCAGAAAGTTCTTCCAAGATGCATTATTTGCATGAAAGATTTCAGCACAAGGAAGACTTTGAAGCGACATATAAAGAAATTTCACGAGGAATTTGATGTGGACGAGTTGGCAACTTTTGGGTCGAGACGTAGAACTTTTACAGTTGATTGCGAAGAGTGTATAAAAAATTTTAACGACGATTTTCATTTGAGCGTTTATAACAAGCTGAAACACTTGAGAGACACGGAGGTGTTGAAGTGTGGGACTTGCTTCGAATCCTACAATTCCCTAGAGTTTGCAATACAGAGGTATAAGATTAGGAACGCTGATGCTAGCAAAAGCAAAATGATTTTGAGCGAACTTTGTACCGCGGAGATGAGCGAGGACGAGCCTGACTTCTCGAACTTCGGAGCTCTGCATGATATGTTGCCAGAGAGTACAACCGGGGATTTTCAAATGAAATTAGAATCTCTTGAAGATTCGGAGACTGAAGTCAAGATGGAACCGGCGTCGCCGTAG
Protein Sequence
MYQNQLDFVCDYCSRTFTRKYNLQTHIENCHINSSCHCNICGQNFGSPAGLVQHLSRGHNNYGQPFPECELCGRIFTRKQNITSHMITVHLQGLGYEIRCRLCKKTFTTERNLKRHINQLHNPDVEYPTCNDCHKVFRGKHSLIAHIQSVHNVSERDAIKCHLCEKVYTNNRNLKRHIEMFHGVKGEFKCDICPKVYTSNQSLRRHARTRHNTESQEHLTCNFCMKVIIGRENFESHIQFHHQDTEMEARYEFVCESCDKSFEEEFCLRQHMKSEHSFKTFYKYCKKSLLKRYGMDTQHIYNCEYCDNSFLTVYELKDHMRVNHDTEYSLSTCNVCFNKFFCKETRAAHRNVCLPPPNVNTCSHCDKLFTDISSLEFHTRIFHPQAQIADSNISSTNIDEEAVSFKCEHCDRIYYSDRSLKHHMKLKHTSDEEVECELCGKICSNKYYLASHIKIVHNNDSWSRCEYCDKQFKSKRNIRRHIEYTHLGMQRHKCIECETLFKEKRSLRKHVRTKHPNSAAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTYPCHLCSVSFSSNETLNIHLETKHLAEDQIYKCEECNLVFKGQEKFDAHNEVCHVNLVPTIKQKVLPRCIICMKDFSTRKTLKRHIKKFHEEFDVDELATFGSRRRTFTVDCEECIKNFNDDFHLSVYNKLKHLRDTEVLKCGTCFESYNSLEFAIQRYKIRNADASKSKMILSELCTAEMSEDEPDFSNFGALHDMLPESTTGDFQMKLESLEDSETEVKMEPASP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00447464;
90% Identity
iTF_00072251;
80% Identity
iTF_01094247;