Basic Information

Insect: Oligia strigilis
Gene Symbol: clz9
Assembly: GCA_951800025.1
Location: OX637558.1:11671343-11673373[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 4.6e-08 3.1e-05 24.6 0.1 17 40 29 52 16 57 0.81

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	4.6e-08	3.1e-05	24.6	0.1	17	40	29	52	16	57	0.81

Sequence Information

Coding Sequence: ATGGTGTATAATTACACAAGACGAACACTGAGAGCTTCTTGGTCAGAGCGTACGATGCGAGAAGCTATTAACGAAGCCAAAAAAAGTAGCATCAAAGGAGCTTCCGTAAAATATGGAATACCATATAGCACATTACAGCGACGTGTCAAGACAGGGTCTTCTATTAAGAAACTAGGCAGGTTCACTCCTATTTTTACAGAAGCAGAAGAACTAGAGCTAGTACAGCATCTTAAGGACCTAGATGCACTCTTTTACGGTCTTACCAAGACAGAATTCTTGCAATTAGTTGGTGAGTTTGCAAAgcgcaaaaataaacaaacgccttttaaaAGCAATGTGGCAGGCAAACAATggtataaaaactttaaaaaacgtCACCCAGAAATTGTATTGCGAACCCCTGAATCTACATCCATAGCTAGGCTACAAGCATTTAATAAACCAGCGGTGAATAGGTTCTACGATTTATTACAAGATAtcatagaaaaagaaaatatcagGCCCGACATGATCTTTAACATGGATGAAACAGGTGTCAGAACATCATCTACAAAACAACCCAAGGTGCTGTCAGTTTATGGAAAAAAGCAAGTAGGGGCGGTTAGCAGCTTAGAAAAGGGAACACTTACAACAGTTATTTGCTGCTGCAGTGCATCTGGAAATTTTGCACCACCGCCTTTCTTCATTTTCAAAAGGAAAAGATTCCAAGCTAGATTGCTTGATGGTTCCATGCCAGGATGTGAAGCTTCTGTTTCTGATAGTGGGTGGATTAGTGGCGAAATATTTTTGGAGTGGATTCGAGTTTTTGTCAGTTGGGTCAGACCAACTCAAGATTGTAAAGCTTTGCTACTTTTAGACAATCACGAGTCGCATAAGTATTATCCTGCTTTGGAGTACGCCACCAGCAACAATGTTGTATTTTTGACGATACCGCCTCATACATCCCACAAATTGCAACCTCTCGACGTGGCTGTATATTCACCGTTCAAAACATTTTTcgaaattgaaattaataaatttcAAAAGGCTCATCCAGGTCGAGTGATCGGACAGTACGATATTGCAAGATTAGTGACTCAAGCTTATTTAAAAGCAGCCACACCACAAAATGCTTTAAGTGGCTTTCGAGCAGCCGGAATTCAACCGTTTGATCGACATTCTATTCCAGAAGAGTATTTTGCACCTGCTGCTGTTTACTGTCGAGACCAGGATATTCCAGTTGCAGAAACCGTAGAGATTTTGAGTGCTAGATCTGATAGTGTTGAACAGCAGCCTGTAAATGTTCATGTGCCTGAACCAGTGGACATCACAGGGGCTGGATCTCAAAGTGTTGCACAGCAGCCGGAAAATGTTTCTGAGCCTGAACCAGTGCAGACCACGGGGGCTGCATCTGAAAATGTTAAACAGCAGCCGGAAAATGTTCCTGATCAAGAACCAGTGGAGATCACAGCTGCTACATCAAATCGCGGACCTGACGTTGTACAAAACGAAGCTTCTCCACGAAGTGAAAGCGTTCTTTCAGAATACATTCCATCTGAGCTGAATATTCCGAACATAGATCCAATGGATGGAAAAACTACACCACCAATTGACAGGTCTCAGAATATCAGTATTCTTCAGGAAATATATCCATTGCCTCAAGGTGTAGAGAAAAAGACAAACAGACGTAGAAAGCTGCAAAAATCAGAGGTGTTAACAAGTACGCCCATCAAAATCCAACAAAAAGATAAATTTGAAAAAGCGAAGATAAAGCAGGAAAAGACGAAGACagcgaagaaaaaaacacaaaaggAAAACCTCAAAAAGGCAAACCCGTCGACGTCTGGTTTAGCAAAGCATCAGAAGAGAACTTCTTCAAACCAGCCTAAACCAAGAGAAAAAGactgtttttgtttagtttgtaaaGAATTATATGTAGATCCTCCGACAGAAGACTGGATTATGTGTTCACAGTGTCAAGAATGGGCACACGAATCTTGCACTTCATACAATGGTCATGGATcctatttttgtgatttttgctTTGATTAG
Protein Sequence: MVYNYTRRTLRASWSERTMREAINEAKKSSIKGASVKYGIPYSTLQRRVKTGSSIKKLGRFTPIFTEAEELELVQHLKDLDALFYGLTKTEFLQLVGEFAKRKNKQTPFKSNVAGKQWYKNFKKRHPEIVLRTPESTSIARLQAFNKPAVNRFYDLLQDIIEKENIRPDMIFNMDETGVRTSSTKQPKVLSVYGKKQVGAVSSLEKGTLTTVICCCSASGNFAPPPFFIFKRKRFQARLLDGSMPGCEASVSDSGWISGEIFLEWIRVFVSWVRPTQDCKALLLLDNHESHKYYPALEYATSNNVVFLTIPPHTSHKLQPLDVAVYSPFKTFFEIEINKFQKAHPGRVIGQYDIARLVTQAYLKAATPQNALSGFRAAGIQPFDRHSIPEEYFAPAAVYCRDQDIPVAETVEILSARSDSVEQQPVNVHVPEPVDITGAGSQSVAQQPENVSEPEPVQTTGAASENVKQQPENVPDQEPVEITAATSNRGPDVVQNEASPRSESVLSEYIPSELNIPNIDPMDGKTTPPIDRSQNISILQEIYPLPQGVEKKTNRRRKLQKSEVLTSTPIKIQQKDKFEKAKIKQEKTKTAKKKTQKENLKKANPSTSGLAKHQKRTSSNQPKPREKDCFCLVCKELYVDPPTEDWIMCSQCQEWAHESCTSYNGHGSYFCDFCFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01026089;
90% Identity: iTF_01093030;
80% Identity: iTF_01094855;