Ostr015789.1
Basic Information
- Insect
- Oligia strigilis
- Gene Symbol
- -
- Assembly
- GCA_951800025.1
- Location
- OX637550.1:17502167-17503480[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-10 8.7e-08 32.8 0.0 3 36 13 47 11 53 0.89
Sequence Information
- Coding Sequence
- ATGGAAGAGAAGAAAAGCAAAGGATCGTGGGAGCCACAGAGCTTACAAACTGctatcgataaaattttgtccaAAAAACTGAGTGTAAGACAAGCTGCAATGCGATACAATATTCCTAAAAGCACTGTACATGACAAAATAAAGGCGCTAAATCGAGGAGAAGAAGTAACGATGAAACCAAAGTTGGGTAGGTTCACTAGCACCTTCTCAGCAGAGTATGAACAAGTTTTGGTAGATCACGTCAAAGATTTATCTAACAGGTGTATGCCGCTCATGAAATATGAATTTCTGAAGTTAGCCTACGACTTAGCTGAAGTTATGAAAATCCCTCATCGATTTAATAAAGAGAAAGGCAGTGCTGGTAAGCATTTTTACTACGACTTTATAAAAAGGCATTCAGACATTTTGCTGAGAGCACCAGAATCGACAAGCATGATGCGCGCCGTTGAATTTAACAAACCACTAGTGGATTTATTCTACGATAATGTTGAAAGGCTGATGACACAGTACAAATTCACAAGCTCAAGAATTTATAATTGTGATGAAACTGGTGTCAGTTGCGTGCATAAAGATCAAAAAGTTCTCGCTCCGAAAGCTGTCCGTCAAGTAGGAAAGCTCACTTCTGCTGAGAGAGGCAAAAACATCACAGTTTTGTTCAGCATGAGTGCTAACGGTCACTACATTCCGCCATTTTTCGTCTTTCCTAGGCAAAGAATGAATGAAAGGCTTATGATGAATGCTCCAGCTGAAAGCGTAGGCGTGGCCCAGCCAAAAGGGTGGATGAATAGTGGcttttttttgcaatatctAGGAATATTTGTCAAACATACGCAACCAACCAAAGAGAACCCTGTGCTGCTTCTACTGGATGGCCATTGCAGTTACAAGACACTGGCGGTAATCAACTTTTGCAGAgaaaataatattcatttaatagGTTCACCGCCACACACTACCCCCAAGCTCCAGCCTCTGGACAGGACATTTATGAAACCATTTAAAGATGCATACAATCAACGATGCGACGTGTGGATGAGAACAAATGCTGGGTGTCGGATAACGGATTACGACATTGCTGGTTTGGTCACAGAAGCATTTACAAAAGTAGCTCGACTGGATATTGCCGTGTCTGGATTCAAATGCACTGGAATCTATCCATTTGATAGACATCTATTTTCTGATCTGGATTATTTTGCTGCAGATATGACCAATATACCACAAGAACAAACAGAAACTTCATCGAACGCACTTAACAACAATAGACAAGCTGGTGTATTATTGAACTCTGTCGTAGAACAGCCAGGAGCATCCTGA
- Protein Sequence
- MEEKKSKGSWEPQSLQTAIDKILSKKLSVRQAAMRYNIPKSTVHDKIKALNRGEEVTMKPKLGRFTSTFSAEYEQVLVDHVKDLSNRCMPLMKYEFLKLAYDLAEVMKIPHRFNKEKGSAGKHFYYDFIKRHSDILLRAPESTSMMRAVEFNKPLVDLFYDNVERLMTQYKFTSSRIYNCDETGVSCVHKDQKVLAPKAVRQVGKLTSAERGKNITVLFSMSANGHYIPPFFVFPRQRMNERLMMNAPAESVGVAQPKGWMNSGFFLQYLGIFVKHTQPTKENPVLLLLDGHCSYKTLAVINFCRENNIHLIGSPPHTTPKLQPLDRTFMKPFKDAYNQRCDVWMRTNAGCRITDYDIAGLVTEAFTKVARLDIAVSGFKCTGIYPFDRHLFSDLDYFAADMTNIPQEQTETSSNALNNNRQAGVLLNSVVEQPGAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01157683; iTF_01152964; iTF_01156230; iTF_00822861; iTF_00822859; iTF_00822875; iTF_00667316; iTF_00172748; iTF_01561949; iTF_00323422;
- 90% Identity
- iTF_00667316;
- 80% Identity
- -